RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 BFARQ9NZS9 450 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 SEC31AO94979 1220 aaKnown RBP16.39■□□□□ 0.22
HCFC1-201ENST00000310441 P3H1Q32P28 736 aa16.39■□□□□ 0.22
HCFC1-201ENST00000310441 MAGED2Q9UNF1 606 aaPredicted RBP16.39■□□□□ 0.22
HCFC1-201ENST00000310441 YEATS2Q9ULM3 1422 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 ADCY3O60266 1144 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 MB21D1Q8N884 522 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 SH3GL2Q99962 352 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 PARVBQ9HBI1 364 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 H0Y3Z8 333 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 IREB2P48200 963 aaKnown RBP16.39■□□□□ 0.21
HCFC1-201ENST00000310441 MAGOHP61326 146 aaKnown RBP16.39■□□□□ 0.21
HCFC1-201ENST00000310441 G2E3Q7L622 706 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 AP1M1Q9BXS5 423 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 GUCA1CO95843 209 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 SLC7A5Q01650 507 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 HIF1AQ16665 826 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 EFHC2Q5JST6 749 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 ZMYM1Q5SVZ6 1142 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 PI4KBQ9UBF8 816 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 SOX6P35712 828 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 HSPA9P38646 679 aaKnown RBP16.39■□□□□ 0.21
HCFC1-201ENST00000310441 PSD3Q9NYI0 1048 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 CLDN3O15551 220 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 PDCLQ13371 301 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 TRAF7Q6Q0C0 670 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 DSTYKQ6XUX3 929 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 SH3KBP1Q96B97 665 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 FAM161BQ96MY7 647 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 OSBPL1AQ9BXW6 950 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 ABHD10Q9NUJ1 306 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 DCDC2Q9UHG0 476 aa16.39■□□□□ 0.21
HCFC1-201ENST00000310441 SETD3Q86TU7 594 aaPredicted RBP16.39■□□□□ 0.21
HCFC1-201ENST00000310441 RBM46Q8TBY0 533 aaKnown RBP16.39■□□□□ 0.21
HCFC1-201ENST00000310441 NGRNQ9NPE2 291 aaKnown RBP16.39■□□□□ 0.21
HCFC1-201ENST00000310441 NFKBIL1Q9UBC1 381 aaPredicted RBP16.39■□□□□ 0.21
HCFC1-201ENST00000310441 PRPF4O43172 522 aaKnown RBP eCLIP16.38■□□□□ 0.213e-6■□□□□ 8.3
HCFC1-201ENST00000310441 PDE8BO95263 885 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 MTHFD1LQ6UB35 978 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 BEST2Q8NFU1 509 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 DYRK4Q9NR20 520 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 PALMO75781 387 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 KLC1Q07866 573 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 CDO1Q16878 200 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 CMTR1Q8N1G2 835 aaKnown RBP16.38■□□□□ 0.21
HCFC1-201ENST00000310441 MRPL48Q96GC5 212 aaKnown RBP16.38■□□□□ 0.21
HCFC1-201ENST00000310441 STAP2Q9UGK3 403 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 TRIP13Q15645 432 aaPredicted RBP16.38■□□□□ 0.21
HCFC1-201ENST00000310441 CC2D2BQ6DHV5 1058 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 UNC13DQ70J99 1090 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 HDDC2Q7Z4H3 204 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 ADAM21Q9UKJ8 722 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 ADAMTS12P58397 1594 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 CD58P19256 250 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 TMED10P49755 219 aaKnown RBP16.38■□□□□ 0.21
HCFC1-201ENST00000310441 GPS1Q13098 491 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 PRKG1Q13976 671 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 DDIASQ8IXT1 998 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 PLEKHA8Q96JA3 519 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 NUP85Q9BW27 656 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 C2orf40Q9H1Z8 148 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 AIPL1Q9NZN9 384 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 ACRBPQ8NEB7 543 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 CABLES1Q8TDN4 633 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 CCDC134Q9H6E4 229 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 REREQ9P2R6 1566 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 CYLC2Q14093 348 aaPredicted RBP16.38■□□□□ 0.21
HCFC1-201ENST00000310441 SLC7A5P2Q9GIP4 190 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 MAD2L2Q9UI95 211 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 SDC4P31431 198 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 PRKCQQ04759 706 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 RESP18Q5W5W9 173 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 EFL1Q7Z2Z2 1120 aaKnown RBP16.38■□□□□ 0.21
HCFC1-201ENST00000310441 FOXP3Q9BZS1 431 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 SPHKAPQ2M3C7 1700 aa16.38■□□□□ 0.21
HCFC1-201ENST00000310441 CYP2C19P33261 490 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 LIFRP42702 1097 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 COG1Q8WTW3 980 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 MAP4K1Q92918 833 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 ATP6V1G3Q96LB4 118 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 ETNK1Q9HBU6 452 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.37■□□□□ 0.21
HCFC1-201ENST00000310441 ZHX2Q9Y6X8 837 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 MYO1CO00159 1063 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 RCAN1P53805 252 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 DCAF4Q8WV16 495 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 TMEM161AQ9NX61 479 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 H2AFY2Q9P0M6 372 aaPredicted RBP16.37■□□□□ 0.21
HCFC1-201ENST00000310441 KIF20BQ96Q89 1820 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 ITSN1Q15811 1721 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 RASGRF1Q13972 1273 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 TEX2Q8IWB9 1127 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 ASIC4Q96FT7 647 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 GINS4Q9BRT9 223 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 ABCB6Q9NP58 842 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 QRICH2Q9H0J4 1663 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 NUP62P37198 522 aaPredicted RBP16.37■□□□□ 0.21
HCFC1-201ENST00000310441 TERF2Q15554 542 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 BBS7Q8IWZ6 715 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 PPHLN1Q8NEY8 458 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms