RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 LMO3Q8TAP4 145 aa23.13■■□□□ 1.29
ATG4D-201ENST00000309469 POMGNT1Q8WZA1 660 aa23.13■■□□□ 1.29
ATG4D-201ENST00000309469 FBXL18Q96ME1 805 aa23.13■■□□□ 1.29
ATG4D-201ENST00000309469 SPATA33Q96N06 139 aa23.13■■□□□ 1.29
ATG4D-201ENST00000309469 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.13■■□□□ 1.29
ATG4D-201ENST00000309469 PDGFCQ9NRA1 345 aa23.13■■□□□ 1.29
ATG4D-201ENST00000309469 APEX2Q9UBZ4 518 aa23.13■■□□□ 1.29
ATG4D-201ENST00000309469 PPME1Q9Y570 386 aa23.13■■□□□ 1.29
ATG4D-201ENST00000309469 A0A087X0T9 212 aa23.12■■□□□ 1.29
ATG4D-201ENST00000309469 MAFO75444 373 aaPredicted RBP23.12■■□□□ 1.29
ATG4D-201ENST00000309469 FAM228BP0C875 321 aa23.12■■□□□ 1.29
ATG4D-201ENST00000309469 ZBTB48P10074 688 aaPredicted RBP23.12■■□□□ 1.29
ATG4D-201ENST00000309469 GARTP22102 1010 aa23.12■■□□□ 1.29
ATG4D-201ENST00000309469 ADORA2AP29274 412 aa23.12■■□□□ 1.29
ATG4D-201ENST00000309469 STAT1P42224 750 aa23.12■■□□□ 1.29
ATG4D-201ENST00000309469 GCLMP48507 274 aa23.12■■□□□ 1.29
ATG4D-201ENST00000309469 TTLL4Q14679 1199 aa23.12■■□□□ 1.29
ATG4D-201ENST00000309469 ARMCX2Q7L311 632 aa23.12■■□□□ 1.29
ATG4D-201ENST00000309469 PLPPR4Q7Z2D5 763 aa23.12■■□□□ 1.29
ATG4D-201ENST00000309469 BBXQ8WY36 941 aaPredicted RBP23.12■■□□□ 1.29
ATG4D-201ENST00000309469 BICD1Q96G01 975 aa23.12■■□□□ 1.29
ATG4D-201ENST00000309469 LUC7LQ9NQ29 371 aaKnown RBP23.12■■□□□ 1.29
ATG4D-201ENST00000309469 ADAMTS1Q9UHI8 967 aa23.12■■□□□ 1.29
ATG4D-201ENST00000309469 TADA3O75528 432 aa23.12■■□□□ 1.29
ATG4D-201ENST00000309469 ZNF571Q7Z3V5 609 aaPredicted RBP23.12■■□□□ 1.29
ATG4D-201ENST00000309469 ABRAQ8N0Z2 381 aa23.12■■□□□ 1.29
ATG4D-201ENST00000309469 PDCL2Q8N4E4 241 aa23.12■■□□□ 1.29
ATG4D-201ENST00000309469 DEPTORQ8TB45 409 aa23.12■■□□□ 1.29
ATG4D-201ENST00000309469 SCFD2Q8WU76 684 aa23.12■■□□□ 1.29
ATG4D-201ENST00000309469 COPS5Q92905 334 aa23.12■■□□□ 1.29
ATG4D-201ENST00000309469 DIS3Q9Y2L1 958 aaKnown RBP23.12■■□□□ 1.29
ATG4D-201ENST00000309469 MYH9P35579 1960 aaKnown RBP23.11■■□□□ 1.29
ATG4D-201ENST00000309469 EFCAB8A8MWE9 144 aa23.11■■□□□ 1.29
ATG4D-201ENST00000309469 PMM2O15305 246 aa23.11■■□□□ 1.29
ATG4D-201ENST00000309469 STRNO43815 780 aa23.11■■□□□ 1.29
ATG4D-201ENST00000309469 FERP16591 822 aa23.11■■□□□ 1.29
ATG4D-201ENST00000309469 STRN3Q13033 797 aa23.11■■□□□ 1.29
ATG4D-201ENST00000309469 ELF2Q15723 593 aa23.11■■□□□ 1.29
ATG4D-201ENST00000309469 ERCC6LQ2NKX8 1250 aa23.11■■□□□ 1.29
ATG4D-201ENST00000309469 TMEM63BQ5T3F8 832 aa23.11■■□□□ 1.29
ATG4D-201ENST00000309469 MFSD14AQ96MC6 490 aa23.11■■□□□ 1.29
ATG4D-201ENST00000309469 LRRIQ4A6NIV6 560 aa23.1■■□□□ 1.29
ATG4D-201ENST00000309469 MARK3P27448 753 aa23.1■■□□□ 1.29
ATG4D-201ENST00000309469 AMPD2Q01433 879 aa23.1■■□□□ 1.29
ATG4D-201ENST00000309469 DRAP1Q14919 205 aaPredicted RBP23.1■■□□□ 1.29
ATG4D-201ENST00000309469 EPC2Q52LR7 807 aa23.1■■□□□ 1.29
ATG4D-201ENST00000309469 TRIM50Q86XT4 487 aa23.1■■□□□ 1.29
ATG4D-201ENST00000309469 ATP8B4Q8TF62 1192 aa23.1■■□□□ 1.29
ATG4D-201ENST00000309469 F8VZ95 297 aa23.1■■□□□ 1.29
ATG4D-201ENST00000309469 RFX1P22670 979 aa23.1■■□□□ 1.29
ATG4D-201ENST00000309469 ANXA13P27216 316 aa23.1■■□□□ 1.29
ATG4D-201ENST00000309469 SOX5P35711 763 aa23.1■■□□□ 1.29
ATG4D-201ENST00000309469 LIG4P49917 911 aa23.1■■□□□ 1.29
ATG4D-201ENST00000309469 PHLDB3Q6NSJ2 640 aa23.1■■□□□ 1.29
ATG4D-201ENST00000309469 GPD1LQ8N335 351 aa23.1■■□□□ 1.29
ATG4D-201ENST00000309469 TMC2Q8TDI7 906 aa23.1■■□□□ 1.29
ATG4D-201ENST00000309469 PARD3BQ8TEW8 1205 aa23.1■■□□□ 1.29
ATG4D-201ENST00000309469 UBXN4Q92575 508 aa23.1■■□□□ 1.29
ATG4D-201ENST00000309469 CCDC127Q96BQ5 260 aa23.1■■□□□ 1.29
ATG4D-201ENST00000309469 PTPN18Q99952 460 aa23.1■■□□□ 1.29
ATG4D-201ENST00000309469 TMEM117Q9H0C3 514 aa23.1■■□□□ 1.29
ATG4D-201ENST00000309469 IVNS1ABPQ9Y6Y0 642 aa23.1■■□□□ 1.29
ATG4D-201ENST00000309469 K7ERI5 159 aa23.09■■□□□ 1.29
ATG4D-201ENST00000309469 TACC1O75410 805 aa23.09■■□□□ 1.29
ATG4D-201ENST00000309469 GFPT2O94808 682 aa23.09■■□□□ 1.29
ATG4D-201ENST00000309469 PNMA6AP0CW24 399 aaPredicted RBP23.09■■□□□ 1.29
ATG4D-201ENST00000309469 MXI1P50539 228 aa23.09■■□□□ 1.29
ATG4D-201ENST00000309469 TRIM58Q8NG06 486 aa23.09■■□□□ 1.29
ATG4D-201ENST00000309469 PARK7Q99497 189 aaKnown RBP23.09■■□□□ 1.29
ATG4D-201ENST00000309469 ENC1O14682 589 aa23.08■■□□□ 1.29
ATG4D-201ENST00000309469 PLCB4Q15147 1175 aa23.08■■□□□ 1.29
ATG4D-201ENST00000309469 TAPT1Q6NXT6 567 aa23.08■■□□□ 1.29
ATG4D-201ENST00000309469 GPR88Q9GZN0 384 aa23.08■■□□□ 1.29
ATG4D-201ENST00000309469 SMARCAD1Q9H4L7 1026 aa23.08■■□□□ 1.29
ATG4D-201ENST00000309469 STYXL1Q9Y6J8 313 aa23.08■■□□□ 1.29
ATG4D-201ENST00000309469 LRRIQ3A6PVS8 624 aaPredicted RBP23.08■■□□□ 1.28
ATG4D-201ENST00000309469 MOCS3O95396 460 aa23.08■■□□□ 1.28
ATG4D-201ENST00000309469 PIGRP01833 764 aa23.08■■□□□ 1.28
ATG4D-201ENST00000309469 ATP1A1P05023 1023 aaKnown RBP23.08■■□□□ 1.28
ATG4D-201ENST00000309469 SLC26A2P50443 739 aa23.08■■□□□ 1.28
ATG4D-201ENST00000309469 ENPEPQ07075 957 aa23.08■■□□□ 1.28
ATG4D-201ENST00000309469 CYP24A1Q07973 514 aa23.08■■□□□ 1.28
ATG4D-201ENST00000309469 C10orf76Q5T2E6 689 aa23.08■■□□□ 1.28
ATG4D-201ENST00000309469 IER5Q5VY09 327 aa23.08■■□□□ 1.28
ATG4D-201ENST00000309469 PAPD7Q5XG87 772 aaKnown RBP23.08■■□□□ 1.28
ATG4D-201ENST00000309469 TRAPPC11Q7Z392 1133 aa23.08■■□□□ 1.28
ATG4D-201ENST00000309469 ZNF467Q7Z7K2 595 aaPredicted RBP23.08■■□□□ 1.28
ATG4D-201ENST00000309469 FMNL3Q8IVF7 1028 aa23.08■■□□□ 1.28
ATG4D-201ENST00000309469 EXOC8Q8IYI6 725 aa23.08■■□□□ 1.28
ATG4D-201ENST00000309469 CEP112Q8N8E3 955 aa23.08■■□□□ 1.28
ATG4D-201ENST00000309469 TMEM134Q9H6X4 195 aa23.08■■□□□ 1.28
ATG4D-201ENST00000309469 VTA1Q9NP79 307 aa23.08■■□□□ 1.28
ATG4D-201ENST00000309469 USP20Q9Y2K6 914 aa23.08■■□□□ 1.28
ATG4D-201ENST00000309469 ANO9A1A5B4 782 aa23.07■■□□□ 1.28
ATG4D-201ENST00000309469 EVI5O60447 810 aa23.07■■□□□ 1.28
ATG4D-201ENST00000309469 DRP2Q13474 957 aa23.07■■□□□ 1.28
ATG4D-201ENST00000309469 CAPSQ13938 189 aa23.07■■□□□ 1.28
ATG4D-201ENST00000309469 WHAMMP3Q1A5X7 153 aa23.07■■□□□ 1.28
ATG4D-201ENST00000309469 CST9Q5W186 159 aa23.07■■□□□ 1.28
ATG4D-201ENST00000309469 SRGAP1Q7Z6B7 1085 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms