RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 SAAL1Q96ER3 474 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 GRIN2DO15399 1336 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 MBD4O95243 580 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 PFKFB1P16118 471 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 CDC27P30260 824 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 PPP2R3CQ969Q6 453 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 HPCAL4Q9UM19 191 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 C19orf81C9J6K1 198 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 TAF5LO75529 589 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 PEX19P40855 299 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 DRG2P55039 364 aaKnown RBP4.27□□□□□ -1.73
USH2A-201ENST00000307340 XIAPP98170 497 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 TSC22D1Q15714 1073 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 LRRC23Q53EV4 343 aaPredicted RBP4.27□□□□□ -1.73
USH2A-201ENST00000307340 SGO2Q562F6 1265 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 ARHGEF16Q5VV41 709 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 ARMC2Q8NEN0 867 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 CENPTQ96BT3 561 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 DNAJC7Q99615 494 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 SELENOSQ9BQE4 189 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 RETREG1Q9H6L5 497 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 FETUBQ9UGM5 382 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 PAIP2BQ9ULR5 123 aaKnown RBP4.27□□□□□ -1.73
USH2A-201ENST00000307340 KRT87PA6NCN2 255 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 SMCO2A6NFE2 343 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 DEAF1O75398 565 aaPredicted RBP4.27□□□□□ -1.73
USH2A-201ENST00000307340 CCDC130P13994 396 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 FASTKD5Q7L8L6 764 aaKnown RBP4.27□□□□□ -1.73
USH2A-201ENST00000307340 TTC8Q8TAM2 541 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 RIT1Q92963 219 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 XPO6Q96QU8 1125 aaKnown RBP4.27□□□□□ -1.73
USH2A-201ENST00000307340 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.27□□□□□ -1.73
USH2A-201ENST00000307340 XAB2Q9HCS7 855 aaKnown RBP4.27□□□□□ -1.73
USH2A-201ENST00000307340 NUB1Q9Y5A7 615 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 XPO1O14980 1071 aaKnown RBP4.27□□□□□ -1.73
USH2A-201ENST00000307340 ADSLP30566 484 aaPredicted RBP4.27□□□□□ -1.73
USH2A-201ENST00000307340 FXR1P51114 621 aaKnown RBP eCLIP4.27□□□□□ -1.73
USH2A-201ENST00000307340 COPZ1P61923 177 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 GPC5P78333 572 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 FBXO11Q86XK2 927 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 RHOT1Q8IXI2 618 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 CTNND1O60716 968 aaKnown RBP4.27□□□□□ -1.73
USH2A-201ENST00000307340 FAM107AO95990 144 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 BFSP2Q13515 415 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 TRIM69Q86WT6 500 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 ASAP3Q8TDY4 903 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 NUDCD1Q96RS6 583 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 THUMPD2Q9BTF0 503 aaKnown RBP4.27□□□□□ -1.73
USH2A-201ENST00000307340 PITPNM3Q9BZ71 974 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 KCNK9Q9NPC2 374 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 TLK1Q9UKI8 766 aa4.27□□□□□ -1.73
USH2A-201ENST00000307340 SCN4AP35499 1836 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 PRR23AA6NEV1 266 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 KPNA6O60684 536 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 RPS6KA5O75582 802 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 SERPINB5P36952 375 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 NNMTP40261 264 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 TSPY1Q01534 308 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 GNA13Q14344 377 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 ICA1LQ8NDH6 482 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 KLHL29Q96CT2 875 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 CARD14Q9BXL6 1004 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 CCDC134Q9H6E4 229 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 FEM1BQ9UK73 627 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 PCDHA1Q9Y5I3 950 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 CLUHO75153 1309 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 DEFA1P59665 94 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 DEFA3P59666 94 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 CENPCQ03188 943 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 KRT80Q6KB66 452 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 MICALL2Q8IY33 904 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 POLR3CQ9BUI4 534 aaPredicted RBP4.26□□□□□ -1.73
USH2A-201ENST00000307340 VTI1BQ9UEU0 232 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 CTNND2Q9UQB3 1225 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 ZNF142P52746 1687 aaPredicted RBP4.26□□□□□ -1.73
USH2A-201ENST00000307340 UNCXA6NJT0 531 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 QSOX1O00391 747 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 POLGP54098 1239 aaPredicted RBP4.26□□□□□ -1.73
USH2A-201ENST00000307340 OCA2Q04671 838 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 CASP8Q14790 479 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 CEP55Q53EZ4 464 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 FAM227BQ96M60 508 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 KCNK16Q96T55 309 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 AASDHPPTQ9NRN7 309 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 EXOC1LA0A1B0GW35 172 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 NUP107P57740 925 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 ZWILCHQ9H900 591 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 NRBP1Q9UHY1 535 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 CORO2BQ9UQ03 480 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 FARP1Q9Y4F1 1045 aaPredicted RBP4.26□□□□□ -1.73
USH2A-201ENST00000307340 CTTNQ14247 550 aaKnown RBP4.26□□□□□ -1.73
USH2A-201ENST00000307340 KNOP1Q1ED39 458 aaKnown RBP4.26□□□□□ -1.73
USH2A-201ENST00000307340 SPDYAQ5MJ70 313 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 SAMD1Q6SPF0 538 aaPredicted RBP4.26□□□□□ -1.73
USH2A-201ENST00000307340 RBM43Q6ZSC3 357 aaKnown RBP4.26□□□□□ -1.73
USH2A-201ENST00000307340 STK33Q9BYT3 514 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 AMACRQ9UHK6 382 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 PCDHA7Q9UN72 937 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 USP54Q70EL1 1684 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 CHGBP05060 677 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms