RNA–Protein interactions for RNA: ENST00000307180.4

TSNARE1-201, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TSNARE1, Length 1,907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-201ENST00000307180 ARVCFO00192 962 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 PQBP1O60828 265 aaKnown RBP17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 EYA4O95677 639 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 RGS19P49795 217 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 STAT5BP51692 787 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 RTP1P59025 263 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 KCNMA1Q12791 1236 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 ADAM9Q13443 819 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 TEX35Q5T0J7 233 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 ZC3H3Q8IXZ2 948 aaKnown RBP17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 CCDC42Q96M95 316 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 HSD17B14Q9BPX1 270 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 HTATIP2Q9BUP3 242 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 BHMT2Q9H2M3 363 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 RNPEPQ9H4A4 650 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 ARGLU1Q9NWB6 273 aaPredicted RBP17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 PSAPP07602 524 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 MARSP56192 900 aaKnown RBP17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 EDRF1Q3B7T1 1238 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 PPP4R3CPQ6ZMV5 832 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 RRAGAQ7L523 313 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 CCDC155Q8N6L0 562 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 NEK11Q8NG66 645 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 JAKMIP2Q96AA8 810 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 KATNAL1Q9BW62 490 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 EPC1Q9H2F5 836 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 SMARCAD1Q9H4L7 1026 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 ZNF302Q9NR11 478 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 PCDH10Q9P2E7 1040 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 GABBR1Q9UBS5 961 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 TFR2Q9UP52 801 aa17.31■□□□□ 0.36
TSNARE1-201ENST00000307180 CETN3O15182 167 aa17.3■□□□□ 0.36
TSNARE1-201ENST00000307180 KRT86O43790 486 aa17.3■□□□□ 0.36
TSNARE1-201ENST00000307180 LGR5O75473 907 aa17.3■□□□□ 0.36
TSNARE1-201ENST00000307180 SLITRK3O94933 977 aa17.3■□□□□ 0.36
TSNARE1-201ENST00000307180 CASP5P51878 434 aa17.3■□□□□ 0.36
TSNARE1-201ENST00000307180 PPP2R5CQ13362 524 aa17.3■□□□□ 0.36
TSNARE1-201ENST00000307180 B3GNT9Q6UX72 402 aa17.3■□□□□ 0.36
TSNARE1-201ENST00000307180 EPM2AIP1Q7L775 607 aaPredicted RBP17.3■□□□□ 0.36
TSNARE1-201ENST00000307180 SFR1Q86XK3 245 aa17.3■□□□□ 0.36
TSNARE1-201ENST00000307180 TRIM59Q8IWR1 403 aa17.3■□□□□ 0.36
TSNARE1-201ENST00000307180 C7orf31Q8N865 590 aa17.3■□□□□ 0.36
TSNARE1-201ENST00000307180 TUFT1Q9NNX1 390 aa17.3■□□□□ 0.36
TSNARE1-201ENST00000307180 ARHGAP20Q9P2F6 1191 aa17.3■□□□□ 0.36
TSNARE1-201ENST00000307180 HDAC6Q9UBN7 1215 aa17.3■□□□□ 0.36
TSNARE1-201ENST00000307180 PUF60Q9UHX1 559 aaKnown RBP17.3■□□□□ 0.36
TSNARE1-201ENST00000307180 SCN10AQ9Y5Y9 1956 aa17.3■□□□□ 0.36
TSNARE1-201ENST00000307180 IGKV6D-21A0A0A0MT36 114 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 RCCD1A6NED2 376 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 HAS3O00219 553 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 PLEKP08567 350 aaPredicted RBP17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 SFNP31947 248 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 JAK3P52333 1124 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 CYP27A1Q02318 531 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 TLE2Q04725 743 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 SPA17Q15506 151 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 WHAMMP3Q1A5X7 153 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 KNOP1Q1ED39 458 aaKnown RBP17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 FAM160B1Q5W0V3 765 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 BANK1Q8NDB2 785 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 BAP1Q92560 729 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 RUSC1Q9BVN2 902 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 LACRTQ9GZZ8 138 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 ZSWIM4Q9H7M6 989 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 ERAP1Q9NZ08 941 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 MYO6Q9UM54 1294 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 EMSYQ7Z589 1322 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 ALPK3Q96L96 1907 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 LRRC53A6NM62 1247 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 EIF4A3P38919 411 aaKnown RBP17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 CDK7P50613 346 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 CTTNQ14247 550 aaKnown RBP17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 UGCGQ16739 394 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 TPH2Q8IWU9 490 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 C7orf61Q8IZ16 206 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 DYDC2Q96IM9 177 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 TRPV6Q9H1D0 765 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 FAM53CQ9NYF3 392 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 TRAF3IP3Q9Y228 551 aa17.29■□□□□ 0.36
TSNARE1-201ENST00000307180 EVI5O60447 810 aa17.28■□□□□ 0.36
TSNARE1-201ENST00000307180 HOXD13P35453 343 aa17.28■□□□□ 0.36
TSNARE1-201ENST00000307180 TUBB4BP68371 445 aa17.28■□□□□ 0.36
TSNARE1-201ENST00000307180 AMPD2Q01433 879 aa17.28■□□□□ 0.36
TSNARE1-201ENST00000307180 BMS1Q14692 1282 aaKnown RBP17.28■□□□□ 0.36
TSNARE1-201ENST00000307180 SNX17Q15036 470 aa17.28■□□□□ 0.36
TSNARE1-201ENST00000307180 RINT1Q6NUQ1 792 aa17.28■□□□□ 0.36
TSNARE1-201ENST00000307180 PDXDC1Q6P996 788 aa17.28■□□□□ 0.36
TSNARE1-201ENST00000307180 CACNA2D4Q7Z3S7 1137 aa17.28■□□□□ 0.36
TSNARE1-201ENST00000307180 SLC43A3Q8NBI5 491 aa17.28■□□□□ 0.36
TSNARE1-201ENST00000307180 EHBP1Q8NDI1 1231 aa17.28■□□□□ 0.36
TSNARE1-201ENST00000307180 PARD6BQ9BYG5 372 aa17.28■□□□□ 0.36
TSNARE1-201ENST00000307180 TRMT13Q9NUP7 481 aaKnown RBP17.28■□□□□ 0.36
TSNARE1-201ENST00000307180 TRPC6Q9Y210 931 aa17.28■□□□□ 0.36
TSNARE1-201ENST00000307180 RSPH10B2B2RC85 870 aa17.27■□□□□ 0.36
TSNARE1-201ENST00000307180 ZNF263O14978 683 aa17.27■□□□□ 0.36
TSNARE1-201ENST00000307180 B4GALT4O60513 344 aa17.27■□□□□ 0.36
TSNARE1-201ENST00000307180 PRPF6O94906 941 aaKnown RBP17.27■□□□□ 0.36
TSNARE1-201ENST00000307180 RSPH10BP0C881 870 aa17.27■□□□□ 0.36
TSNARE1-201ENST00000307180 SMIM10L2AP0DMW4 78 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms