RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 DYDC2Q96IM9 177 aa15.71■□□□□ 0.11
PTPN9-201ENST00000306726 MTMR4Q9NYA4 1195 aa15.71■□□□□ 0.11
PTPN9-201ENST00000306726 CTDP1Q9Y5B0 961 aaPredicted RBP15.71■□□□□ 0.11
PTPN9-201ENST00000306726 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.71■□□□□ 0.11
PTPN9-201ENST00000306726 CLDN3O15551 220 aa15.7■□□□□ 0.1
PTPN9-201ENST00000306726 RPS6KA5O75582 802 aa15.7■□□□□ 0.1
PTPN9-201ENST00000306726 ZNF131P52739 623 aa15.7■□□□□ 0.1
PTPN9-201ENST00000306726 TMED2Q15363 201 aa15.7■□□□□ 0.1
PTPN9-201ENST00000306726 DLGAP5Q15398 846 aa15.7■□□□□ 0.1
PTPN9-201ENST00000306726 NEDD1Q8NHV4 660 aa15.7■□□□□ 0.1
PTPN9-201ENST00000306726 INPP4AQ96PE3 977 aaPredicted RBP15.7■□□□□ 0.1
PTPN9-201ENST00000306726 FOXN3O00409 490 aaPredicted RBP15.7■□□□□ 0.1
PTPN9-201ENST00000306726 DDX3XO00571 662 aaKnown RBP eCLIP15.7■□□□□ 0.15e-14■■■■□ 23.5
PTPN9-201ENST00000306726 THAP12O43422 761 aa15.7■□□□□ 0.1
PTPN9-201ENST00000306726 TTLL1O95922 423 aa15.7■□□□□ 0.1
PTPN9-201ENST00000306726 ATF7P17544 494 aaPredicted RBP15.7■□□□□ 0.1
PTPN9-201ENST00000306726 PCK1P35558 622 aa15.7■□□□□ 0.1
PTPN9-201ENST00000306726 HOOK3Q86VS8 718 aa15.7■□□□□ 0.1
PTPN9-201ENST00000306726 RSRC1Q96IZ7 334 aaKnown RBP15.7■□□□□ 0.1
PTPN9-201ENST00000306726 XPO6Q96QU8 1125 aaKnown RBP15.7■□□□□ 0.1
PTPN9-201ENST00000306726 KLF6Q99612 283 aaPredicted RBP15.7■□□□□ 0.1
PTPN9-201ENST00000306726 ISCUQ9H1K1 167 aa15.7■□□□□ 0.1
PTPN9-201ENST00000306726 TCRBV7S2A1N4TA0A589 114 aa15.7■□□□□ 0.1
PTPN9-201ENST00000306726 GOLGA8RI6L899 631 aa15.7■□□□□ 0.1
PTPN9-201ENST00000306726 MYL1P05976 194 aa15.7■□□□□ 0.1
PTPN9-201ENST00000306726 PPP1R2P41236 205 aa15.7■□□□□ 0.1
PTPN9-201ENST00000306726 USP11P51784 963 aa15.7■□□□□ 0.1
PTPN9-201ENST00000306726 SBK1Q52WX2 424 aa15.7■□□□□ 0.1
PTPN9-201ENST00000306726 MIGA2Q7L4E1 593 aa15.7■□□□□ 0.1
PTPN9-201ENST00000306726 PIK3R5Q8WYR1 880 aa15.7■□□□□ 0.1
PTPN9-201ENST00000306726 ZNF653Q96CK0 615 aa15.7■□□□□ 0.1
PTPN9-201ENST00000306726 KIFC3Q9BVG8 833 aa15.7■□□□□ 0.1
PTPN9-201ENST00000306726 SCN9AQ15858 1988 aa15.7■□□□□ 0.1
PTPN9-201ENST00000306726 PNMA6FA0A0J9YX94 578 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 SSU72P8A0A1W2PR75 194 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 ARHGEF35A5YM69 484 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 GAS7O60861 476 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 ELF1P32519 619 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 GALNT17Q6IS24 598 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 CCDC137Q6PK04 289 aaKnown RBP15.69■□□□□ 0.1
PTPN9-201ENST00000306726 LZTS2Q9BRK4 669 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 RAB17Q9H0T7 212 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 IGSF9BQ9UPX0 1349 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 A0A1W2PQJ5 194 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 PI4K2BG5E9Z4 385 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 DYNLT1P63172 113 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 KCNJ2P63252 427 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 NSMCE1Q8WV22 266 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 PI4K2AQ9BTU6 479 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 GDF3Q9NR23 364 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 SBF1O95248 1867 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 COL4A5P29400 1685 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 PRPHP41219 470 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 MYL7Q01449 175 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 C9orf131Q5VYM1 1079 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 RPUSD2Q8IZ73 545 aaKnown RBP15.69■□□□□ 0.1
PTPN9-201ENST00000306726 DNAJC19Q96DA6 116 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 DDX4Q9NQI0 724 aaKnown RBP15.69■□□□□ 0.1
PTPN9-201ENST00000306726 ALG6Q9Y672 507 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 TCP10L2B9ZVM9 353 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 CYP26A1O43174 497 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 PPP1R11O60927 126 aaPredicted RBP15.69■□□□□ 0.1
PTPN9-201ENST00000306726 MTMR3Q13615 1198 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 TNFAIP1Q13829 316 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 GLE1Q53GS7 698 aaKnown RBP15.69■□□□□ 0.1
PTPN9-201ENST00000306726 TRIM59Q8IWR1 403 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 FUKQ8N0W3 1084 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 ARHGEF2Q92974 986 aaKnown RBP15.69■□□□□ 0.1
PTPN9-201ENST00000306726 ZNF668Q96K58 619 aaPredicted RBP15.69■□□□□ 0.1
PTPN9-201ENST00000306726 VPS37BQ9H9H4 285 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 DCTN4Q9UJW0 460 aa15.69■□□□□ 0.1
PTPN9-201ENST00000306726 ENTPD3O75355 529 aa15.68■□□□□ 0.1
PTPN9-201ENST00000306726 CTNNA2P26232 953 aa15.68■□□□□ 0.1
PTPN9-201ENST00000306726 ICA1Q05084 483 aa15.68■□□□□ 0.1
PTPN9-201ENST00000306726 CERKLQ49MI3 558 aaPredicted RBP15.68■□□□□ 0.1
PTPN9-201ENST00000306726 ZNF394Q53GI3 561 aa15.68■□□□□ 0.1
PTPN9-201ENST00000306726 LRCH2Q5VUJ6 765 aa15.68■□□□□ 0.1
PTPN9-201ENST00000306726 JAMLQ86YT9 394 aa15.68■□□□□ 0.1
PTPN9-201ENST00000306726 NUCKS1Q9H1E3 243 aaKnown RBP15.68■□□□□ 0.1
PTPN9-201ENST00000306726 PNMA3Q9UL41 463 aa15.68■□□□□ 0.1
PTPN9-201ENST00000306726 UBOX5O94941 541 aa15.68■□□□□ 0.1
PTPN9-201ENST00000306726 BIRC3Q13489 604 aa15.68■□□□□ 0.1
PTPN9-201ENST00000306726 SPDL1Q96EA4 605 aa15.68■□□□□ 0.1
PTPN9-201ENST00000306726 PBKQ96KB5 322 aa15.68■□□□□ 0.1
PTPN9-201ENST00000306726 MTA3Q9BTC8 594 aa15.68■□□□□ 0.1
PTPN9-201ENST00000306726 VCPKMTQ9H867 229 aa15.68■□□□□ 0.1
PTPN9-201ENST00000306726 A0A1B0GUA9 196 aa15.68■□□□□ 0.1
PTPN9-201ENST00000306726 FECHP22830 423 aa15.68■□□□□ 0.1
PTPN9-201ENST00000306726 CCDC6Q16204 474 aa15.68■□□□□ 0.1
PTPN9-201ENST00000306726 UBL4BQ8N7F7 174 aa15.68■□□□□ 0.1
PTPN9-201ENST00000306726 CAVIN3Q969G5 261 aa15.68■□□□□ 0.1
PTPN9-201ENST00000306726 IDI2Q9BXS1 227 aa15.68■□□□□ 0.1
PTPN9-201ENST00000306726 ZBTB5O15062 677 aa15.67■□□□□ 0.1
PTPN9-201ENST00000306726 FBXO11Q86XK2 927 aa15.67■□□□□ 0.1
PTPN9-201ENST00000306726 ALG3Q92685 438 aa15.67■□□□□ 0.1
PTPN9-201ENST00000306726 SPZ1Q9BXG8 430 aa15.67■□□□□ 0.1
PTPN9-201ENST00000306726 NOD2Q9HC29 1040 aa15.67■□□□□ 0.1
PTPN9-201ENST00000306726 GJB6O95452 261 aa15.67■□□□□ 0.1
PTPN9-201ENST00000306726 SOX10P56693 466 aa15.67■□□□□ 0.1
PTPN9-201ENST00000306726 ZBTB16Q05516 673 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 960.2 ms