RNA–Protein interactions for RNA: ENST00000305699.15

FANCA-201, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-201ENST00000305699 OFD1O75665 1012 aa17.34■□□□□ 0.37
FANCA-201ENST00000305699 ARL2P36404 184 aa17.34■□□□□ 0.37
FANCA-201ENST00000305699 TRAPPC10P48553 1259 aa17.34■□□□□ 0.37
FANCA-201ENST00000305699 NBR1Q14596 966 aa17.34■□□□□ 0.37
FANCA-201ENST00000305699 BMS1Q14692 1282 aaKnown RBP17.34■□□□□ 0.37
FANCA-201ENST00000305699 CPB2Q96IY4 423 aa17.34■□□□□ 0.37
FANCA-201ENST00000305699 NACC1Q96RE7 527 aa17.34■□□□□ 0.37
FANCA-201ENST00000305699 POP1Q99575 1024 aaKnown RBP17.34■□□□□ 0.37
FANCA-201ENST00000305699 POLR3CQ9BUI4 534 aaPredicted RBP17.34■□□□□ 0.37
FANCA-201ENST00000305699 RSAD1Q9HA92 442 aa17.34■□□□□ 0.37
FANCA-201ENST00000305699 CNTNAP2Q9UHC6 1331 aa17.34■□□□□ 0.37
FANCA-201ENST00000305699 KIF3AQ9Y496 699 aa17.34■□□□□ 0.37
FANCA-201ENST00000305699 CARNS1A5YM72 827 aa17.33■□□□□ 0.36
FANCA-201ENST00000305699 TSPAN1O60635 241 aa17.33■□□□□ 0.36
FANCA-201ENST00000305699 EYA4O95677 639 aa17.33■□□□□ 0.36
FANCA-201ENST00000305699 GLRA2P23416 452 aa17.33■□□□□ 0.36
FANCA-201ENST00000305699 COASYQ13057 564 aa17.33■□□□□ 0.36
FANCA-201ENST00000305699 SMC1AQ14683 1233 aaKnown RBP17.33■□□□□ 0.36
FANCA-201ENST00000305699 PCBP1Q15365 356 aaKnown RBP eCLIP17.33■□□□□ 0.36
FANCA-201ENST00000305699 UBXN11Q5T124 520 aa17.33■□□□□ 0.36
FANCA-201ENST00000305699 LLGL2Q6P1M3 1020 aa17.33■□□□□ 0.36
FANCA-201ENST00000305699 NOTUMQ6P988 496 aa17.33■□□□□ 0.36
FANCA-201ENST00000305699 POTEGQ6S5H5 508 aa17.33■□□□□ 0.36
FANCA-201ENST00000305699 AGMOQ6ZNB7 445 aa17.33■□□□□ 0.36
FANCA-201ENST00000305699 MRPL10Q7Z7H8 261 aaKnown RBP17.33■□□□□ 0.36
FANCA-201ENST00000305699 SMRP1Q8NCR6 262 aa17.33■□□□□ 0.36
FANCA-201ENST00000305699 FAM193BQ96PV7 902 aaPredicted RBP17.33■□□□□ 0.36
FANCA-201ENST00000305699 NRDE2Q9H7Z3 1164 aa17.33■□□□□ 0.36
FANCA-201ENST00000305699 GPRC5CQ9NQ84 441 aa17.33■□□□□ 0.36
FANCA-201ENST00000305699 LRRIQ4A6NIV6 560 aa17.32■□□□□ 0.36
FANCA-201ENST00000305699 PI4K2BG5E9Z4 385 aa17.32■□□□□ 0.36
FANCA-201ENST00000305699 ITGA4P13612 1032 aa17.32■□□□□ 0.36
FANCA-201ENST00000305699 AXLP30530 894 aa17.32■□□□□ 0.36
FANCA-201ENST00000305699 MBTD1Q05BQ5 628 aa17.32■□□□□ 0.36
FANCA-201ENST00000305699 POU5F1BQ06416 359 aa17.32■□□□□ 0.36
FANCA-201ENST00000305699 TMEM31Q5JXX7 168 aa17.32■□□□□ 0.36
FANCA-201ENST00000305699 HAUS3Q68CZ6 603 aa17.32■□□□□ 0.36
FANCA-201ENST00000305699 IFNLR1Q8IU57 520 aaPredicted RBP17.32■□□□□ 0.36
FANCA-201ENST00000305699 TMEM87AQ8NBN3 555 aa17.32■□□□□ 0.36
FANCA-201ENST00000305699 CNNM3Q8NE01 707 aa17.32■□□□□ 0.36
FANCA-201ENST00000305699 MCPH1Q8NEM0 835 aa17.32■□□□□ 0.36
FANCA-201ENST00000305699 VN1R2Q8NFZ6 395 aa17.32■□□□□ 0.36
FANCA-201ENST00000305699 CCDC51Q96ER9 411 aa17.32■□□□□ 0.36
FANCA-201ENST00000305699 EIF2AQ9BY44 585 aaKnown RBP17.32■□□□□ 0.36
FANCA-201ENST00000305699 TRIM6Q9C030 488 aaPredicted RBP17.32■□□□□ 0.36
FANCA-201ENST00000305699 DNAJB4Q9UDY4 337 aa17.32■□□□□ 0.36
FANCA-201ENST00000305699 DBR1Q9UK59 544 aaKnown RBP17.32■□□□□ 0.36
FANCA-201ENST00000305699 USP15Q9Y4E8 981 aaPredicted RBP17.32■□□□□ 0.36
FANCA-201ENST00000305699 ARHGEF35A5YM69 484 aa17.31■□□□□ 0.36
FANCA-201ENST00000305699 FAM86C2PA6NEL3 165 aa17.31■□□□□ 0.36
FANCA-201ENST00000305699 GALTP07902 379 aa17.31■□□□□ 0.36
FANCA-201ENST00000305699 NCLP19338 710 aaKnown RBP17.31■□□□□ 0.36
FANCA-201ENST00000305699 U2AF2P26368 475 aaKnown RBP eCLIP17.31■□□□□ 0.364e-7■□□□□ 8.2
FANCA-201ENST00000305699 RPA1P27694 616 aa17.31■□□□□ 0.36
FANCA-201ENST00000305699 CCT6AP40227 531 aaKnown RBP17.31■□□□□ 0.36
FANCA-201ENST00000305699 MCTP1Q6DN14 999 aa17.31■□□□□ 0.36
FANCA-201ENST00000305699 PADI6Q6TGC4 694 aa17.31■□□□□ 0.36
FANCA-201ENST00000305699 TMEM173Q86WV6 379 aaPredicted RBP17.31■□□□□ 0.36
FANCA-201ENST00000305699 ZNF280BQ86YH2 543 aa17.31■□□□□ 0.36
FANCA-201ENST00000305699 VPS52Q8N1B4 723 aa17.31■□□□□ 0.36
FANCA-201ENST00000305699 MRPL43Q8N983 215 aaKnown RBP17.31■□□□□ 0.36
FANCA-201ENST00000305699 SMG8Q8ND04 991 aaKnown RBP17.31■□□□□ 0.36
FANCA-201ENST00000305699 IGSF21Q96ID5 467 aa17.31■□□□□ 0.36
FANCA-201ENST00000305699 APOL6Q9BWW8 343 aa17.31■□□□□ 0.36
FANCA-201ENST00000305699 KANSL3Q9P2N6 904 aa17.31■□□□□ 0.36
FANCA-201ENST00000305699 LRWD1Q9UFC0 647 aa17.31■□□□□ 0.36
FANCA-201ENST00000305699 IPPQ9Y573 584 aa17.31■□□□□ 0.36
FANCA-201ENST00000305699 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.3■□□□□ 0.36
FANCA-201ENST00000305699 C2orf71A6NGG8 1288 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 C19orf67A6NJJ6 358 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 CXCL14O95715 111 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 POMCP01189 267 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 ALADP13716 330 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 ARF4P18085 180 aaPredicted RBP17.3■□□□□ 0.36
FANCA-201ENST00000305699 SLC11A1P49279 550 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 AFF1P51825 1210 aaKnown RBP17.3■□□□□ 0.36
FANCA-201ENST00000305699 HACE1Q8IYU2 909 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 AUTS2Q8WXX7 1259 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 LRFN3Q9BTN0 628 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 NFKBIZQ9BYH8 718 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 CSRNP2Q9H175 543 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 UBN1Q9NPG3 1134 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 B4GALT5O43286 388 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 DCXO43602 365 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 B4GALT3O60512 393 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 FXR2P51116 673 aaKnown RBP eCLIP17.3■□□□□ 0.363e-6■□□□□ 9.9
FANCA-201ENST00000305699 PTGDRQ13258 359 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 AMHR2Q16671 573 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 TMEM132AQ24JP5 1023 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 ANKRD54Q6NXT1 300 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 DDX53Q86TM3 631 aaKnown RBP17.3■□□□□ 0.36
FANCA-201ENST00000305699 ZBTB8OSQ8IWT0 167 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 C4orf32Q8N8J7 132 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 BCL7CQ8WUZ0 217 aaPredicted RBP17.3■□□□□ 0.36
FANCA-201ENST00000305699 TMX3Q96JJ7 454 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 APOL5Q9BWW9 433 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 RAB34Q9BZG1 259 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 ZBP1Q9H171 429 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 RAPGEFL1Q9UHV5 662 aa17.3■□□□□ 0.36
FANCA-201ENST00000305699 HES2Q9Y543 173 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms