RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 FAM53CQ9NYF3 392 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 ARHGAP28Q9P2N2 729 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 USP20Q9Y2K6 914 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 MYH9P35579 1960 aaKnown RBP7.12□□□□□ -1.27
USP47-201ENST00000305481 GLTPD2A6NH11 291 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 POTEJP0CG39 1038 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 KRT13P13646 458 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 EMC2Q15006 297 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 EAPPQ56P03 285 aaPredicted RBP7.12□□□□□ -1.27
USP47-201ENST00000305481 ARHGEF19Q8IW93 802 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 LNX1Q8TBB1 728 aaPredicted RBP7.12□□□□□ -1.27
USP47-201ENST00000305481 COG1Q8WTW3 980 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 FBXL18Q96ME1 805 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 TLR10Q9BXR5 811 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 NIFKQ9BYG3 293 aaKnown RBP7.12□□□□□ -1.27
USP47-201ENST00000305481 EXOC7Q9UPT5 735 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 FOXN3O00409 490 aaPredicted RBP7.12□□□□□ -1.27
USP47-201ENST00000305481 SEC31AO94979 1220 aaKnown RBP7.12□□□□□ -1.27
USP47-201ENST00000305481 SLC25A27O95847 323 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 STAT1P42224 750 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 TARBP2Q15633 366 aaKnown RBP7.12□□□□□ -1.27
USP47-201ENST00000305481 TMEM63BQ5T3F8 832 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 NFRKBQ6P4R8 1299 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 ALKBH5Q6P6C2 394 aaKnown RBP7.12□□□□□ -1.27
USP47-201ENST00000305481 MSANTD4Q8NCY6 345 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 ASAP3Q8TDY4 903 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 NOX5Q96PH1 765 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 LRRIQ3A6PVS8 624 aaPredicted RBP7.11□□□□□ -1.27
USP47-201ENST00000305481 PRLRP16471 622 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 FERP16591 822 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 GLRA2P23416 452 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 PARD3BQ8TEW8 1205 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 SEMA4DQ92854 862 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 MFSD14AQ96MC6 490 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 PORCNQ9H237 461 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 PCDHGC5Q9Y5F6 944 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 BTNL10A8MVZ5 291 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 PMM2O15305 246 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 P4HA2O15460 535 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 PALMO75781 387 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 GGPS1O95749 300 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 RHOXF2BP0C7M4 288 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 TGFB3P10600 412 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 CYP2C8P10632 490 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 CXCR5P32302 372 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 TCF7P36402 384 aaPredicted RBP7.11□□□□□ -1.27
USP47-201ENST00000305481 ARL2P36404 184 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 POLGP54098 1239 aaPredicted RBP7.11□□□□□ -1.27
USP47-201ENST00000305481 ARHGAP44Q17R89 818 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 BRDTQ58F21 947 aaPredicted RBP7.11□□□□□ -1.27
USP47-201ENST00000305481 CC2D1AQ6P1N0 951 aaPredicted RBP7.11□□□□□ -1.27
USP47-201ENST00000305481 ARMC9Q7Z3E5 817 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 AFAP1L1Q8TED9 768 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 KAT5Q92993 513 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 CCDC127Q96BQ5 260 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 FAM84AQ96KN4 292 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 OSBPL9Q96SU4 736 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 RHOXF2Q9BQY4 288 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 HAPLN2Q9GZV7 340 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 UBE2TQ9NPD8 197 aaPredicted RBP7.11□□□□□ -1.27
USP47-201ENST00000305481 TOPORSQ9NS56 1045 aaPredicted RBP7.11□□□□□ -1.27
USP47-201ENST00000305481 RAB21Q9UL25 225 aa7.11□□□□□ -1.27
USP47-201ENST00000305481 GRID2IPA4D2P6 1211 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 EDN1P05305 212 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 ANXA13P27216 316 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 STAT5BP51692 787 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 MAP2K1Q02750 393 aaPredicted RBP7.1□□□□□ -1.27
USP47-201ENST00000305481 DRP2Q13474 957 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 NEDD9Q14511 834 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 BMS1Q14692 1282 aaKnown RBP7.1□□□□□ -1.27
USP47-201ENST00000305481 HSDL1Q3SXM5 330 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 C10orf76Q5T2E6 689 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 METTL7BQ6UX53 244 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 FASTKD5Q7L8L6 764 aaKnown RBP7.1□□□□□ -1.27
USP47-201ENST00000305481 PALB2Q86YC2 1186 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 GLYCTKQ8IVS8 523 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 TXLNBQ8N3L3 684 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 POMGNT1Q8WZA1 660 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 ALS2CR12Q96Q35 445 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 PSMB7Q99436 277 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.1□□□□□ -1.27
USP47-201ENST00000305481 SMARCAL1Q9NZC9 954 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 EHD2Q9NZN4 543 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 HNRNPDLO14979 420 aaKnown RBP7.1□□□□□ -1.27
USP47-201ENST00000305481 FTCDO95954 541 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 WNT7BP56706 349 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 CBX1P83916 185 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 CYP24A1Q07973 514 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 KIF22Q14807 665 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 CCDC62Q6P9F0 684 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 KCNN1Q92952 543 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 ELMO3Q96BJ8 720 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 IFT74Q96LB3 600 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 MMP19Q99542 508 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 GPR20Q99678 358 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 LUC7LQ9NQ29 371 aaKnown RBP7.1□□□□□ -1.27
USP47-201ENST00000305481 COQ4Q9Y3A0 265 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 ZBTB42B2RXF5 422 aa7.1□□□□□ -1.27
USP47-201ENST00000305481 N4BP1O75113 896 aaKnown RBP7.1□□□□□ -1.27
USP47-201ENST00000305481 OSBPP22059 807 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms