RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 BRAPQ7Z569 592 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 RNF168Q8IYW5 571 aaPredicted RBP12.5□□□□□ -0.41
CLCC1-201ENST00000302500 LRRC43Q8N309 656 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 MCPH1Q8NEM0 835 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 HELQQ8TDG4 1101 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 POF1BQ8WVV4 589 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 RSPH1Q8WYR4 309 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 PABPC5Q96DU9 382 aaKnown RBP12.5□□□□□ -0.41
CLCC1-201ENST00000302500 MSLNLQ96KJ4 702 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 RUSC1Q9BVN2 902 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 BHMT2Q9H2M3 363 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 UBE2ZQ9H832 354 aaPredicted RBP12.5□□□□□ -0.41
CLCC1-201ENST00000302500 BLOC1S4Q9NUP1 217 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 DDX19AQ9NUU7 478 aaKnown RBP12.5□□□□□ -0.41
CLCC1-201ENST00000302500 TBC1D13Q9NVG8 400 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 KIAA1024Q9UPX6 916 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 LZTS1Q9Y250 596 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 VWA8A3KMH1 1905 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 ZMYM2Q9UBW7 1377 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 DENND4AQ7Z401 1863 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 CNTNAP2Q9UHC6 1331 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 DLL1O00548 723 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 MEFVO15553 781 aaPredicted RBP12.49□□□□□ -0.41
CLCC1-201ENST00000302500 HOXA2O43364 376 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 EYA4O95677 639 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 AXLP30530 894 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 CCT6AP40227 531 aaKnown RBP12.49□□□□□ -0.41
CLCC1-201ENST00000302500 RAB27AP51159 221 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 DSC1Q08554 894 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 LEXMQ3ZCV2 418 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 ARSHQ5FYA8 562 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 RINT1Q6NUQ1 792 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 FAM173BQ6P4H8 233 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 KCNT2Q6UVM3 1135 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 MICALL1Q8N3F8 863 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 KCTD17Q8N5Z5 321 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 SNX29Q8TEQ0 813 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 HLA-CQ95604 372 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 CCDC51Q96ER9 411 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 FIZ1Q96SL8 496 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 CXCL16Q9H2A7 254 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 NRDE2Q9H7Z3 1164 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 MIOSQ9NXC5 875 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 CLEC1BQ9P126 229 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 ARHGAP28Q9P2N2 729 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 DNAJB4Q9UDY4 337 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 LRFN2Q9ULH4 789 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 IPPQ9Y573 584 aa12.49□□□□□ -0.41
CLCC1-201ENST00000302500 PLXNA3P51805 1871 aa12.48□□□□□ -0.41
CLCC1-201ENST00000302500 LINC01565O15544 149 aa12.48□□□□□ -0.41
CLCC1-201ENST00000302500 DDHD2O94830 711 aa12.48□□□□□ -0.41
CLCC1-201ENST00000302500 LAG3P18627 525 aa12.48□□□□□ -0.41
CLCC1-201ENST00000302500 GUCY2CP25092 1073 aa12.48□□□□□ -0.41
CLCC1-201ENST00000302500 NAMPTP43490 491 aa12.48□□□□□ -0.41
CLCC1-201ENST00000302500 ADAM15Q13444 863 aa12.48□□□□□ -0.41
CLCC1-201ENST00000302500 PTPROQ16827 1216 aa12.48□□□□□ -0.41
CLCC1-201ENST00000302500 TWF2Q6IBS0 349 aaKnown RBP12.48□□□□□ -0.41
CLCC1-201ENST00000302500 DTHD1Q6ZMT9 781 aa12.48□□□□□ -0.41
CLCC1-201ENST00000302500 ZNF280BQ86YH2 543 aa12.48□□□□□ -0.41
CLCC1-201ENST00000302500 SYT2Q8N9I0 419 aaPredicted RBP12.48□□□□□ -0.41
CLCC1-201ENST00000302500 ERMNQ8TAM6 284 aa12.48□□□□□ -0.41
CLCC1-201ENST00000302500 CPB2Q96IY4 423 aa12.48□□□□□ -0.41
CLCC1-201ENST00000302500 PRIMPOLQ96LW4 560 aa12.48□□□□□ -0.41
CLCC1-201ENST00000302500 NTPCRQ9BSD7 190 aaKnown RBP12.48□□□□□ -0.41
CLCC1-201ENST00000302500 CSRNP2Q9H175 543 aa12.48□□□□□ -0.41
CLCC1-201ENST00000302500 POLD4Q9HCU8 107 aa12.48□□□□□ -0.41
CLCC1-201ENST00000302500 PTPRHQ9HD43 1115 aa12.48□□□□□ -0.41
CLCC1-201ENST00000302500 CD320Q9NPF0 282 aa12.48□□□□□ -0.41
CLCC1-201ENST00000302500 MARCH5Q9NX47 278 aa12.48□□□□□ -0.41
CLCC1-201ENST00000302500 FBXO2Q9UK22 296 aaPredicted RBP12.48□□□□□ -0.41
CLCC1-201ENST00000302500 HES2Q9Y543 173 aa12.48□□□□□ -0.41
CLCC1-201ENST00000302500 ANK1P16157 1881 aa12.48□□□□□ -0.41
CLCC1-201ENST00000302500 CITO14578 2027 aa12.47□□□□□ -0.41
CLCC1-201ENST00000302500 SLC26A4O43511 780 aa12.47□□□□□ -0.41
CLCC1-201ENST00000302500 LILRB3O75022 631 aa12.47□□□□□ -0.41
CLCC1-201ENST00000302500 GALTP07902 379 aa12.47□□□□□ -0.41
CLCC1-201ENST00000302500 PROZP22891 400 aa12.47□□□□□ -0.41
CLCC1-201ENST00000302500 BCAR1P56945 870 aa12.47□□□□□ -0.41
CLCC1-201ENST00000302500 GNL2Q13823 731 aaKnown RBP12.47□□□□□ -0.41
CLCC1-201ENST00000302500 SF3A1Q15459 793 aaKnown RBP12.47□□□□□ -0.41
CLCC1-201ENST00000302500 NOMO2Q5JPE7 1267 aa12.47□□□□□ -0.41
CLCC1-201ENST00000302500 NT5DC1Q5TFE4 455 aa12.47□□□□□ -0.41
CLCC1-201ENST00000302500 MCTP1Q6DN14 999 aa12.47□□□□□ -0.41
CLCC1-201ENST00000302500 TMEM184AQ6ZMB5 413 aa12.47□□□□□ -0.41
CLCC1-201ENST00000302500 USP49Q70CQ1 688 aa12.47□□□□□ -0.41
CLCC1-201ENST00000302500 MRPS27Q92552 414 aaKnown RBP12.47□□□□□ -0.41
CLCC1-201ENST00000302500 AK8Q96MA6 479 aa12.47□□□□□ -0.41
CLCC1-201ENST00000302500 SCLT1Q96NL6 688 aa12.47□□□□□ -0.41
CLCC1-201ENST00000302500 NECAB3Q96P71 396 aaPredicted RBP12.47□□□□□ -0.41
CLCC1-201ENST00000302500 KIFC3Q9BVG8 833 aa12.47□□□□□ -0.41
CLCC1-201ENST00000302500 NXF3Q9H4D5 531 aaKnown RBP12.47□□□□□ -0.41
CLCC1-201ENST00000302500 PDZD7Q9H5P4 517 aa12.47□□□□□ -0.41
CLCC1-201ENST00000302500 USP20Q9Y2K6 914 aa12.47□□□□□ -0.41
CLCC1-201ENST00000302500 CLIC4Q9Y696 253 aa12.47□□□□□ -0.41
CLCC1-201ENST00000302500 C2orf16Q68DN1 1984 aa12.46□□□□□ -0.41
CLCC1-201ENST00000302500 ARHGEF35A5YM69 484 aa12.46□□□□□ -0.41
CLCC1-201ENST00000302500 VWA3AA6NCI4 1184 aa12.46□□□□□ -0.41
CLCC1-201ENST00000302500 HIDE1A8MVS5 230 aa12.46□□□□□ -0.41
CLCC1-201ENST00000302500 H3BQV1 296 aa12.46□□□□□ -0.41
CLCC1-201ENST00000302500 ACKR2O00590 384 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms