RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 CPSF2Q9P2I0 782 aaKnown RBP15.76■□□□□ 0.11
COL6A2-201ENST00000300527 FOXN3O00409 490 aaPredicted RBP15.76■□□□□ 0.11
COL6A2-201ENST00000300527 CLDN3O15551 220 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 CHRNA3P32297 505 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 ZNF76P36508 570 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 BNIP1Q12981 228 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 MPP2Q14168 576 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 SETDB1Q15047 1291 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 CBWD6Q4V339 395 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 CBWD3Q5JTY5 395 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 CBWD5Q5RIA9 395 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 SYCP3Q8IZU3 236 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 SEC14L1Q92503 715 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 RPGRQ92834 1020 aaKnown RBP15.76■□□□□ 0.11
COL6A2-201ENST00000300527 UBE2TQ9NPD8 197 aaPredicted RBP15.76■□□□□ 0.11
COL6A2-201ENST00000300527 ZFATQ9P243 1243 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 PASKQ96RG2 1323 aa15.75■□□□□ 0.11
COL6A2-201ENST00000300527 GBP1P32455 592 aa15.75■□□□□ 0.11
COL6A2-201ENST00000300527 SSR1P43307 286 aaKnown RBP15.75■□□□□ 0.11
COL6A2-201ENST00000300527 ZNF131P52739 623 aa15.75■□□□□ 0.11
COL6A2-201ENST00000300527 SLMAPQ14BN4 828 aa15.75■□□□□ 0.11
COL6A2-201ENST00000300527 ZFYVE27Q5T4F4 411 aa15.75■□□□□ 0.11
COL6A2-201ENST00000300527 TBC1D9BQ66K14 1250 aa15.75■□□□□ 0.11
COL6A2-201ENST00000300527 NUDCD1Q96RS6 583 aa15.75■□□□□ 0.11
COL6A2-201ENST00000300527 TAF1P21675 1872 aa15.75■□□□□ 0.11
COL6A2-201ENST00000300527 CACNA1SQ13698 1873 aa15.75■□□□□ 0.11
COL6A2-201ENST00000300527 BCL9O00512 1426 aa15.75■□□□□ 0.11
COL6A2-201ENST00000300527 VCAM1P19320 739 aa15.75■□□□□ 0.11
COL6A2-201ENST00000300527 PTGIRP43119 386 aa15.75■□□□□ 0.11
COL6A2-201ENST00000300527 CCDC6Q16204 474 aa15.75■□□□□ 0.11
COL6A2-201ENST00000300527 PPP4R3CPQ6ZMV5 832 aa15.75■□□□□ 0.11
COL6A2-201ENST00000300527 METTL14Q9HCE5 456 aaKnown RBP15.75■□□□□ 0.11
COL6A2-201ENST00000300527 DOCK2Q92608 1830 aa15.75■□□□□ 0.11
COL6A2-201ENST00000300527 PLCH1Q4KWH8 1693 aa15.75■□□□□ 0.11
COL6A2-201ENST00000300527 DPPA5A6NC42 116 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 ZBTB39O15060 712 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 ECEL1O95672 775 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 MARSP56192 900 aaKnown RBP15.74■□□□□ 0.11
COL6A2-201ENST00000300527 TPH2Q8IWU9 490 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 TSC22D3Q99576 134 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 PARP2Q9UGN5 583 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 A0A0A6YYK5 440 aaPredicted RBP15.74■□□□□ 0.11
COL6A2-201ENST00000300527 LDHCP07864 332 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 KRT17Q04695 432 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 RNF207Q6ZRF8 634 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 CYP4X1Q8N118 509 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 WDR66Q8TBY9 1149 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 SH3GL3Q99963 347 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 INTS2Q9H0H0 1204 aaKnown RBP15.74■□□□□ 0.11
COL6A2-201ENST00000300527 INTUQ9ULD6 942 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 SPDYE5A6NIY4 337 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 EXOC3O60645 756 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 RARGP13631 454 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 COILP38432 576 aaPredicted RBP15.74■□□□□ 0.11
COL6A2-201ENST00000300527 SLC12A3P55017 1021 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 GSTO1P78417 241 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 PPP2R5EQ16537 467 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 VSTM1Q6UX27 236 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 ECHDC2Q86YB7 292 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 RPUSD2Q8IZ73 545 aaKnown RBP15.74■□□□□ 0.11
COL6A2-201ENST00000300527 HEMGNQ9BXL5 484 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 ANKRD2Q9GZV1 360 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 MYLK2Q9H1R3 596 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 RIOX1Q9H6W3 641 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 RXFP1Q9HBX9 757 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 TYW1Q9NV66 732 aaKnown RBP15.74■□□□□ 0.11
COL6A2-201ENST00000300527 PCDHA1Q9Y5I3 950 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 ASTN1O14525 1302 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 SYNGAP1Q96PV0 1343 aa15.74■□□□□ 0.11
COL6A2-201ENST00000300527 WDR91A4D1P6 747 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 POC1B-GALNT4F8VUJ3 575 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 PODXLO00592 558 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 CBX6O95503 412 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 LINGO3P0C6S8 592 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 GNAT1P11488 350 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 POLD1P28340 1107 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 ADCY8P40145 1251 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 FMO5P49326 533 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 HSPA2P54652 639 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 MYL7Q01449 175 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 PPATQ06203 517 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 MUM1Q2TAK8 710 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 SGO2Q562F6 1265 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 DPY19L2P1Q6NXN4 242 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 LMNTD2Q8IXW0 634 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 GBP7Q8N8V2 638 aaPredicted RBP15.73■□□□□ 0.11
COL6A2-201ENST00000300527 TTC8Q8TAM2 541 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 CRAMP1Q96RY5 1269 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 SLCO1B3Q9NPD5 702 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 UBR2Q8IWV8 1755 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 ALS2Q96Q42 1657 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 PNMA6FA0A0J9YX94 578 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 LRRD1A4D1F6 860 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 POLE2P56282 527 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 JAM2P57087 298 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 SF3B3Q15393 1217 aaKnown RBP15.73■□□□□ 0.11
COL6A2-201ENST00000300527 ERMNQ8TAM6 284 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 ESYT2A0FGR8 921 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 BHMG1C9JSJ3 638 aaPredicted RBP15.73■□□□□ 0.11
COL6A2-201ENST00000300527 ENTPD5O75356 428 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms