RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 PPP1R9AQ9ULJ8 1098 aa14.7□□□□□ -0.06
CDH8-201ENST00000299345 DIS3Q9Y2L1 958 aaKnown RBP14.7□□□□□ -0.06
CDH8-201ENST00000299345 DENND3A2RUS2 1198 aa14.7□□□□□ -0.06
CDH8-201ENST00000299345 NDUFAB1O14561 156 aa14.7□□□□□ -0.06
CDH8-201ENST00000299345 DKC1O60832 514 aaKnown RBP eCLIP14.7□□□□□ -0.06
CDH8-201ENST00000299345 KRT5P13647 590 aa14.7□□□□□ -0.06
CDH8-201ENST00000299345 CCT5P48643 541 aa14.7□□□□□ -0.06
CDH8-201ENST00000299345 GPC5P78333 572 aa14.7□□□□□ -0.06
CDH8-201ENST00000299345 MRPS9P82933 396 aaKnown RBP14.7□□□□□ -0.06
CDH8-201ENST00000299345 MTMR3Q13615 1198 aa14.7□□□□□ -0.06
CDH8-201ENST00000299345 BAATQ14032 418 aaPredicted RBP14.7□□□□□ -0.06
CDH8-201ENST00000299345 ARFGAP2Q8N6H7 521 aa14.7□□□□□ -0.06
CDH8-201ENST00000299345 ARHGEF26Q96DR7 871 aa14.7□□□□□ -0.06
CDH8-201ENST00000299345 TIPINQ9BVW5 301 aa14.7□□□□□ -0.06
CDH8-201ENST00000299345 TAOK3Q9H2K8 898 aa14.7□□□□□ -0.06
CDH8-201ENST00000299345 FAM114A2Q9NRY5 505 aa14.7□□□□□ -0.06
CDH8-201ENST00000299345 TAS2R14Q9NYV8 317 aa14.7□□□□□ -0.06
CDH8-201ENST00000299345 PIM2Q9P1W9 311 aa14.7□□□□□ -0.06
CDH8-201ENST00000299345 ZNF536O15090 1300 aa14.7□□□□□ -0.06
CDH8-201ENST00000299345 PDCLQ13371 301 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 PGM5Q15124 567 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 CLUL1Q15846 466 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 SEL1L2Q5TEA6 688 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 C4orf19Q8IY42 314 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 KIFAP3Q92845 792 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 PDCD2LQ9BRP1 358 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 PDGFDQ9GZP0 370 aaPredicted RBP14.69□□□□□ -0.06
CDH8-201ENST00000299345 HNRNPDLO14979 420 aaKnown RBP14.69□□□□□ -0.06
CDH8-201ENST00000299345 SORBS3O60504 671 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 RUFY4Q6ZNE9 571 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 SLFN11Q7Z7L1 901 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 ARHGEF19Q8IW93 802 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 MTMR14Q8NCE2 650 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 SLC30A5Q8TAD4 765 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 ATP6V0A1Q93050 837 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 IFT74Q96LB3 600 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 NT5C1BQ96P26 610 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 KIFC3Q9BVG8 833 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 CELF4Q9BZC1 486 aaKnown RBP14.69□□□□□ -0.06
CDH8-201ENST00000299345 TMOD4Q9NZQ9 345 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 MYO1CO00159 1063 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 DHX15O43143 795 aaKnown RBP14.69□□□□□ -0.06
CDH8-201ENST00000299345 CTNND1O60716 968 aaKnown RBP14.69□□□□□ -0.06
CDH8-201ENST00000299345 RPS6KA5O75582 802 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 PPP1R37O75864 691 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 VCAM1P19320 739 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 CCND2P30279 289 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 CDR1P51861 262 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 SNRNP35Q16560 246 aaKnown RBP14.69□□□□□ -0.06
CDH8-201ENST00000299345 B3GNT9Q6UX72 402 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 MAP3K20Q9NYL2 800 aaKnown RBP14.69□□□□□ -0.06
CDH8-201ENST00000299345 PCDHA10Q9Y5I2 948 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 ALG6Q9Y672 507 aa14.69□□□□□ -0.06
CDH8-201ENST00000299345 CYP26A1O43174 497 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 NR1D1P20393 614 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 DCAF15Q66K64 600 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 KRT39Q6A163 491 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 CBWD2Q8IUF1 395 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 IQCKQ8N0W5 287 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 ATG4CQ96DT6 458 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 HES6Q96HZ4 224 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 SH3GL2Q99962 352 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 CARD9Q9H257 536 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 GABBR1Q9UBS5 961 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 BRWD3Q6RI45 1802 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 ATP9AO75110 1047 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 PDE6CP51160 858 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 DR1Q01658 176 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 PPARDQ03181 441 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 DHX9Q08211 1270 aaKnown RBP14.68□□□□□ -0.06
CDH8-201ENST00000299345 KIF22Q14807 665 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 TTMPQ5BVD1 217 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 SRLQ86TD4 932 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 FAM107BQ9H098 131 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 ANKEF1Q9NU02 776 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 MIF4GDA9UHW6 222 aaKnown RBP14.68□□□□□ -0.06
CDH8-201ENST00000299345 CNGA1P29973 690 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 UGCGQ16739 394 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 PALB2Q86YC2 1186 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 RASSF4Q9H2L5 321 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 AS3MTQ9HBK9 375 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 CHORDC1Q9UHD1 332 aaPredicted RBP14.68□□□□□ -0.06
CDH8-201ENST00000299345 TMEM59LQ9UK28 342 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 MTUS1Q9ULD2 1270 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 SMCHD1A6NHR9 2005 aa14.68□□□□□ -0.06
CDH8-201ENST00000299345 NR3C2P08235 984 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 SNRPFP62306 86 aaKnown RBP14.67□□□□□ -0.06
CDH8-201ENST00000299345 GTF2BQ00403 316 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 SNRNP48Q6IEG0 339 aaKnown RBP14.67□□□□□ -0.06
CDH8-201ENST00000299345 MREGQ8N565 214 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 ATP6V1G3Q96LB4 118 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 TMEM117Q9H0C3 514 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 VPS33BQ9H267 617 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 PXMP2Q9NR77 195 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 SEPT9Q9UHD8 586 aaPredicted RBP14.67□□□□□ -0.06
CDH8-201ENST00000299345 TBX20Q9UMR3 447 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 NCANO14594 1321 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 PFASO15067 1338 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 SIPA1L1O43166 1804 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 HMGB1P1B2RPK0 211 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms