RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 HAPLN2Q9GZV7 340 aa27.92■■■□□ 2.06
SDCCAG3-201ENST00000298537 SUGCTQ9HAC7 445 aa27.92■■■□□ 2.06
SDCCAG3-201ENST00000298537 A0A087X0T9 212 aa27.92■■■□□ 2.06
SDCCAG3-201ENST00000298537 FAM170AA1A519 330 aa27.92■■■□□ 2.06
SDCCAG3-201ENST00000298537 TTLL13PA6NNM8 815 aa27.92■■■□□ 2.06
SDCCAG3-201ENST00000298537 FAM228BP0C875 321 aa27.92■■■□□ 2.06
SDCCAG3-201ENST00000298537 GCLCP48506 637 aaPredicted RBP27.92■■■□□ 2.06
SDCCAG3-201ENST00000298537 PTK2Q05397 1052 aa27.92■■■□□ 2.06
SDCCAG3-201ENST00000298537 CAPSQ13938 189 aa27.92■■■□□ 2.06
SDCCAG3-201ENST00000298537 TTLL4Q14679 1199 aa27.92■■■□□ 2.06
SDCCAG3-201ENST00000298537 PHLDB3Q6NSJ2 640 aa27.92■■■□□ 2.06
SDCCAG3-201ENST00000298537 CGNQ9P2M7 1197 aaKnown RBP27.92■■■□□ 2.06
SDCCAG3-201ENST00000298537 ADAMTS1Q9UHI8 967 aa27.92■■■□□ 2.06
SDCCAG3-201ENST00000298537 SSU72P8A0A1W2PR75 194 aa27.91■■■□□ 2.06
SDCCAG3-201ENST00000298537 IGF2BP3O00425 579 aaKnown RBP eCLIP27.91■■■□□ 2.06
SDCCAG3-201ENST00000298537 ENC1O14682 589 aa27.91■■■□□ 2.06
SDCCAG3-201ENST00000298537 SNAI1O95863 264 aaPredicted RBP27.91■■■□□ 2.06
SDCCAG3-201ENST00000298537 GJB1P08034 283 aa27.91■■■□□ 2.06
SDCCAG3-201ENST00000298537 ARHGAP1Q07960 439 aa27.91■■■□□ 2.06
SDCCAG3-201ENST00000298537 KCNV1Q6PIU1 500 aa27.91■■■□□ 2.06
SDCCAG3-201ENST00000298537 ZNF571Q7Z3V5 609 aaPredicted RBP27.91■■■□□ 2.06
SDCCAG3-201ENST00000298537 HVCN1Q96D96 273 aa27.91■■■□□ 2.06
SDCCAG3-201ENST00000298537 SALL4Q9UJQ4 1053 aa27.91■■■□□ 2.06
SDCCAG3-201ENST00000298537 IVNS1ABPQ9Y6Y0 642 aa27.91■■■□□ 2.06
SDCCAG3-201ENST00000298537 RBAK-RBAKDNI3L0D1 243 aa27.91■■■□□ 2.06
SDCCAG3-201ENST00000298537 SCFD2Q8WU76 684 aa27.91■■■□□ 2.06
SDCCAG3-201ENST00000298537 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.91■■■□□ 2.06
SDCCAG3-201ENST00000298537 GPR88Q9GZN0 384 aa27.91■■■□□ 2.06
SDCCAG3-201ENST00000298537 KATNBL1Q9H079 304 aa27.91■■■□□ 2.06
SDCCAG3-201ENST00000298537 TMEM117Q9H0C3 514 aa27.91■■■□□ 2.06
SDCCAG3-201ENST00000298537 NUCKS1Q9H1E3 243 aaKnown RBP27.91■■■□□ 2.06
SDCCAG3-201ENST00000298537 DNAJC12Q9UKB3 198 aa27.91■■■□□ 2.06
SDCCAG3-201ENST00000298537 MRFAP1Q9Y605 127 aa27.91■■■□□ 2.06
SDCCAG3-201ENST00000298537 MAFO75444 373 aaPredicted RBP27.9■■■□□ 2.06
SDCCAG3-201ENST00000298537 WNT7BP56706 349 aa27.9■■■□□ 2.06
SDCCAG3-201ENST00000298537 PRPF31Q8WWY3 499 aaKnown RBP27.9■■■□□ 2.06
SDCCAG3-201ENST00000298537 PARK7Q99497 189 aaKnown RBP27.9■■■□□ 2.06
SDCCAG3-201ENST00000298537 RNPEPQ9H4A4 650 aa27.9■■■□□ 2.06
SDCCAG3-201ENST00000298537 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.9■■■□□ 2.06
SDCCAG3-201ENST00000298537 GFPT2O94808 682 aa27.9■■■□□ 2.06
SDCCAG3-201ENST00000298537 FAM213AQ9BRX8 229 aa27.9■■■□□ 2.06
SDCCAG3-201ENST00000298537 MAGEA1P43355 309 aa27.89■■■□□ 2.06
SDCCAG3-201ENST00000298537 DPP9Q86TI2 863 aa27.89■■■□□ 2.06
SDCCAG3-201ENST00000298537 ARHGEF19Q8IW93 802 aa27.89■■■□□ 2.06
SDCCAG3-201ENST00000298537 NPLOC4Q8TAT6 608 aa27.89■■■□□ 2.06
SDCCAG3-201ENST00000298537 DEPTORQ8TB45 409 aa27.89■■■□□ 2.06
SDCCAG3-201ENST00000298537 PACSIN1Q9BY11 444 aa27.89■■■□□ 2.06
SDCCAG3-201ENST00000298537 HDAC6Q9UBN7 1215 aa27.89■■■□□ 2.06
SDCCAG3-201ENST00000298537 DIS3Q9Y2L1 958 aaKnown RBP27.89■■■□□ 2.06
SDCCAG3-201ENST00000298537 LRRIQ3A6PVS8 624 aaPredicted RBP27.89■■■□□ 2.05
SDCCAG3-201ENST00000298537 NAMPTP43490 491 aa27.89■■■□□ 2.05
SDCCAG3-201ENST00000298537 MAP2K1Q02750 393 aaPredicted RBP27.89■■■□□ 2.05
SDCCAG3-201ENST00000298537 ATP8B4Q8TF62 1192 aa27.89■■■□□ 2.05
SDCCAG3-201ENST00000298537 BBXQ8WY36 941 aaPredicted RBP27.89■■■□□ 2.05
SDCCAG3-201ENST00000298537 KRT86O43790 486 aa27.88■■■□□ 2.05
SDCCAG3-201ENST00000298537 RFC5P40937 340 aa27.88■■■□□ 2.05
SDCCAG3-201ENST00000298537 ZNF157P51786 506 aaPredicted RBP27.88■■■□□ 2.05
SDCCAG3-201ENST00000298537 SNRPFP62306 86 aaKnown RBP27.88■■■□□ 2.05
SDCCAG3-201ENST00000298537 GRB14Q14449 540 aa27.88■■■□□ 2.05
SDCCAG3-201ENST00000298537 DRAP1Q14919 205 aaPredicted RBP27.88■■■□□ 2.05
SDCCAG3-201ENST00000298537 ARHGAP44Q17R89 818 aa27.88■■■□□ 2.05
SDCCAG3-201ENST00000298537 BRDTQ58F21 947 aaPredicted RBP27.88■■■□□ 2.05
SDCCAG3-201ENST00000298537 ZBTB41Q5SVQ8 909 aa27.88■■■□□ 2.05
SDCCAG3-201ENST00000298537 RASAL3Q86YV0 1011 aa27.88■■■□□ 2.05
SDCCAG3-201ENST00000298537 PARD3BQ8TEW8 1205 aa27.88■■■□□ 2.05
SDCCAG3-201ENST00000298537 KAT5Q92993 513 aa27.88■■■□□ 2.05
SDCCAG3-201ENST00000298537 TARS2Q9BW92 718 aaKnown RBP27.88■■■□□ 2.05
SDCCAG3-201ENST00000298537 FBXL5Q9UKA1 691 aa27.88■■■□□ 2.05
SDCCAG3-201ENST00000298537 CAPN6Q9Y6Q1 641 aa27.88■■■□□ 2.05
SDCCAG3-201ENST00000298537 LIG4P49917 911 aa27.87■■■□□ 2.05
SDCCAG3-201ENST00000298537 KIF5AQ12840 1032 aa27.87■■■□□ 2.05
SDCCAG3-201ENST00000298537 FAM110CQ1W6H9 321 aa27.87■■■□□ 2.05
SDCCAG3-201ENST00000298537 EHBP1Q8NDI1 1231 aa27.87■■■□□ 2.05
SDCCAG3-201ENST00000298537 SEMA4DQ92854 862 aa27.87■■■□□ 2.05
SDCCAG3-201ENST00000298537 FBXL18Q96ME1 805 aa27.87■■■□□ 2.05
SDCCAG3-201ENST00000298537 APEX2Q9UBZ4 518 aa27.87■■■□□ 2.05
SDCCAG3-201ENST00000298537 TRPC6Q9Y210 931 aa27.87■■■□□ 2.05
SDCCAG3-201ENST00000298537 F8VZ95 297 aa27.87■■■□□ 2.05
SDCCAG3-201ENST00000298537 EPC2Q52LR7 807 aa27.87■■■□□ 2.05
SDCCAG3-201ENST00000298537 LMBRD2Q68DH5 695 aaPredicted RBP27.87■■■□□ 2.05
SDCCAG3-201ENST00000298537 ZNF662Q6ZS27 426 aa27.87■■■□□ 2.05
SDCCAG3-201ENST00000298537 PLPPR4Q7Z2D5 763 aa27.87■■■□□ 2.05
SDCCAG3-201ENST00000298537 ERO1AQ96HE7 468 aa27.87■■■□□ 2.05
SDCCAG3-201ENST00000298537 MAML3Q96JK9 1138 aa27.87■■■□□ 2.05
SDCCAG3-201ENST00000298537 CTAGE9A4FU28 777 aa27.86■■■□□ 2.05
SDCCAG3-201ENST00000298537 K7ERI5 159 aa27.86■■■□□ 2.05
SDCCAG3-201ENST00000298537 ADCY6O43306 1168 aa27.86■■■□□ 2.05
SDCCAG3-201ENST00000298537 STRNO43815 780 aa27.86■■■□□ 2.05
SDCCAG3-201ENST00000298537 MOCS3O95396 460 aa27.86■■■□□ 2.05
SDCCAG3-201ENST00000298537 ACOT2P49753 483 aa27.86■■■□□ 2.05
SDCCAG3-201ENST00000298537 ELF2Q15723 593 aa27.86■■■□□ 2.05
SDCCAG3-201ENST00000298537 ERCC6LQ2NKX8 1250 aa27.86■■■□□ 2.05
SDCCAG3-201ENST00000298537 SEZ6Q53EL9 994 aa27.86■■■□□ 2.05
SDCCAG3-201ENST00000298537 AFG1LQ8WV93 481 aa27.86■■■□□ 2.05
SDCCAG3-201ENST00000298537 ATP1A1P05023 1023 aaKnown RBP27.86■■■□□ 2.05
SDCCAG3-201ENST00000298537 SRGAP2CP0DJJ0 459 aa27.86■■■□□ 2.05
SDCCAG3-201ENST00000298537 DLATP10515 647 aaKnown RBP27.86■■■□□ 2.05
SDCCAG3-201ENST00000298537 MXI1P50539 228 aa27.86■■■□□ 2.05
SDCCAG3-201ENST00000298537 NLRP11P59045 1033 aaKnown RBP27.86■■■□□ 2.05
SDCCAG3-201ENST00000298537 SLC18A3Q16572 532 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms