RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 POMGNT1Q8WZA1 660 aa20.22■□□□□ 0.83
SEC61A2-201ENST00000298428 SLC35C1Q96A29 364 aa20.22■□□□□ 0.83
SEC61A2-201ENST00000298428 KATNAL1Q9BW62 490 aa20.22■□□□□ 0.83
SEC61A2-201ENST00000298428 SPC25Q9HBM1 224 aa20.22■□□□□ 0.83
SEC61A2-201ENST00000298428 SIK3Q9Y2K2 1263 aa20.22■□□□□ 0.83
SEC61A2-201ENST00000298428 NRCAMQ92823 1304 aa20.22■□□□□ 0.83
SEC61A2-201ENST00000298428 EVPLQ92817 2033 aa20.22■□□□□ 0.83
SEC61A2-201ENST00000298428 MYADML2A6NDP7 307 aa20.22■□□□□ 0.83
SEC61A2-201ENST00000298428 HAS3O00219 553 aa20.22■□□□□ 0.83
SEC61A2-201ENST00000298428 NRDCO43847 1150 aa20.22■□□□□ 0.83
SEC61A2-201ENST00000298428 MFAP3LO75121 409 aa20.22■□□□□ 0.83
SEC61A2-201ENST00000298428 PIGRP01833 764 aa20.22■□□□□ 0.83
SEC61A2-201ENST00000298428 HMGCRP04035 888 aa20.22■□□□□ 0.83
SEC61A2-201ENST00000298428 TRIM21P19474 475 aaKnown RBP20.22■□□□□ 0.83
SEC61A2-201ENST00000298428 GARTP22102 1010 aa20.22■□□□□ 0.83
SEC61A2-201ENST00000298428 FXR1P51114 621 aaKnown RBP eCLIP20.22■□□□□ 0.83
SEC61A2-201ENST00000298428 CNGA4Q8IV77 575 aa20.22■□□□□ 0.83
SEC61A2-201ENST00000298428 ZNF296Q8WUU4 475 aaPredicted RBP20.22■□□□□ 0.83
SEC61A2-201ENST00000298428 NUP58Q9BVL2 599 aa20.22■□□□□ 0.83
SEC61A2-201ENST00000298428 CCDC113Q9H0I3 377 aa20.22■□□□□ 0.83
SEC61A2-201ENST00000298428 PYCARDQ9ULZ3 195 aa20.22■□□□□ 0.83
SEC61A2-201ENST00000298428 AKT3Q9Y243 479 aa20.22■□□□□ 0.83
SEC61A2-201ENST00000298428 MAPK13O15264 365 aa20.21■□□□□ 0.83
SEC61A2-201ENST00000298428 SKILP12757 684 aa20.21■□□□□ 0.83
SEC61A2-201ENST00000298428 KRT13P13646 458 aa20.21■□□□□ 0.83
SEC61A2-201ENST00000298428 CCND3P30281 292 aaPredicted RBP20.21■□□□□ 0.83
SEC61A2-201ENST00000298428 PURAQ00577 322 aaKnown RBP20.21■□□□□ 0.83
SEC61A2-201ENST00000298428 BFSP1Q12934 665 aa20.21■□□□□ 0.83
SEC61A2-201ENST00000298428 GNASQ5JWF2 1037 aa20.21■□□□□ 0.83
SEC61A2-201ENST00000298428 INTS8Q75QN2 995 aaKnown RBP20.21■□□□□ 0.83
SEC61A2-201ENST00000298428 ZSWIM2Q8NEG5 633 aa20.21■□□□□ 0.83
SEC61A2-201ENST00000298428 SAAL1Q96ER3 474 aa20.21■□□□□ 0.83
SEC61A2-201ENST00000298428 ZNF668Q96K58 619 aaPredicted RBP20.21■□□□□ 0.83
SEC61A2-201ENST00000298428 UPF3AQ9H1J1 476 aaKnown RBP20.21■□□□□ 0.83
SEC61A2-201ENST00000298428 USP20Q9Y2K6 914 aa20.21■□□□□ 0.83
SEC61A2-201ENST00000298428 CENPFP49454 3210 aa20.21■□□□□ 0.83
SEC61A2-201ENST00000298428 KAT6AQ92794 2004 aa20.2■□□□□ 0.82
SEC61A2-201ENST00000298428 GOLGA8IPA6NC78 632 aa20.2■□□□□ 0.82
SEC61A2-201ENST00000298428 GOLGA8JA6NMD2 632 aa20.2■□□□□ 0.82
SEC61A2-201ENST00000298428 KPNA6O60684 536 aa20.2■□□□□ 0.82
SEC61A2-201ENST00000298428 PGK1P00558 417 aa20.2■□□□□ 0.82
SEC61A2-201ENST00000298428 ARHGEF6Q15052 776 aa20.2■□□□□ 0.82
SEC61A2-201ENST00000298428 MAPK6Q16659 721 aa20.2■□□□□ 0.82
SEC61A2-201ENST00000298428 NFRKBQ6P4R8 1299 aa20.2■□□□□ 0.82
SEC61A2-201ENST00000298428 CCDC112Q8NEF3 446 aa20.2■□□□□ 0.82
SEC61A2-201ENST00000298428 MAP7D2Q96T17 732 aa20.2■□□□□ 0.82
SEC61A2-201ENST00000298428 TARS2Q9BW92 718 aaKnown RBP20.2■□□□□ 0.82
SEC61A2-201ENST00000298428 TTC26A0AVF1 554 aa20.2■□□□□ 0.82
SEC61A2-201ENST00000298428 EDN1P05305 212 aa20.2■□□□□ 0.82
SEC61A2-201ENST00000298428 PRKCBP05771 671 aa20.2■□□□□ 0.82
SEC61A2-201ENST00000298428 PTENP60484 403 aa20.2■□□□□ 0.82
SEC61A2-201ENST00000298428 SNRNP35Q16560 246 aaKnown RBP20.2■□□□□ 0.82
SEC61A2-201ENST00000298428 PXYLP1Q8TE99 480 aa20.2■□□□□ 0.82
SEC61A2-201ENST00000298428 PPP1R13LQ8WUF5 828 aa20.2■□□□□ 0.82
SEC61A2-201ENST00000298428 TTYH3Q9C0H2 523 aa20.2■□□□□ 0.82
SEC61A2-201ENST00000298428 MMRN2Q9H8L6 949 aa20.2■□□□□ 0.82
SEC61A2-201ENST00000298428 STYXL1Q9Y6J8 313 aa20.2■□□□□ 0.82
SEC61A2-201ENST00000298428 MSCO60682 206 aa20.19■□□□□ 0.82
SEC61A2-201ENST00000298428 VTNP04004 478 aa20.19■□□□□ 0.82
SEC61A2-201ENST00000298428 POU5F1BQ06416 359 aa20.19■□□□□ 0.82
SEC61A2-201ENST00000298428 KCNMA1Q12791 1236 aa20.19■□□□□ 0.82
SEC61A2-201ENST00000298428 FIGNQ5HY92 759 aa20.19■□□□□ 0.82
SEC61A2-201ENST00000298428 SLFN12LQ6IEE8 588 aa20.19■□□□□ 0.82
SEC61A2-201ENST00000298428 CBWD2Q8IUF1 395 aa20.19■□□□□ 0.82
SEC61A2-201ENST00000298428 IQCDQ96DY2 449 aa20.19■□□□□ 0.82
SEC61A2-201ENST00000298428 PANX2Q96RD6 677 aa20.19■□□□□ 0.82
SEC61A2-201ENST00000298428 MRPL4Q9BYD3 311 aaKnown RBP20.19■□□□□ 0.82
SEC61A2-201ENST00000298428 NFKBIZQ9BYH8 718 aa20.19■□□□□ 0.82
SEC61A2-201ENST00000298428 XPNPEP3Q9NQH7 507 aa20.19■□□□□ 0.82
SEC61A2-201ENST00000298428 FAM207AQ9NSI2 230 aaPredicted RBP20.19■□□□□ 0.82
SEC61A2-201ENST00000298428 CAPN11Q9UMQ6 739 aa20.19■□□□□ 0.82
SEC61A2-201ENST00000298428 INO80B-WBP1J3KQ70 363 aa20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 RNF225M0QZC1 329 aaPredicted RBP20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 TRIM49P0CI25 452 aa20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 TRIM49CP0CI26 452 aa20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 PHKA2P46019 1235 aa20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 NKX3-2P78367 333 aa20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 MAP3K21Q5TCX8 1036 aa20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 ZPBP2Q6X784 338 aa20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 GPD1LQ8N335 351 aa20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 CCDC51Q96ER9 411 aa20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 FBXL18Q96ME1 805 aa20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 PPP1R16BQ96T49 567 aa20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 CRACR2AQ9BSW2 395 aa20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 INO80BQ9C086 356 aaPredicted RBP20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 TMX1Q9H3N1 280 aa20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 ANKFY1Q9P2R3 1169 aa20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 LUC7L2Q9Y383 392 aaKnown RBP20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 MBLAC1A4D2B0 266 aaPredicted RBP20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 KIAA0391O15091 583 aaKnown RBP20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 ZEB2O60315 1214 aa20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 ADAMTS4O75173 837 aa20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 ADRB2P07550 413 aa20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 KRT9P35527 623 aa20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 VAMP7P51809 220 aa20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 MBTD1Q05BQ5 628 aa20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 KIAA0319LQ8IZA0 1049 aa20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 BAG1Q99933 345 aaPredicted RBP20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 MTG1Q9BT17 334 aaPredicted RBP20.18■□□□□ 0.82
SEC61A2-201ENST00000298428 IFT122Q9HBG6 1241 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms