RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 TPM3P06753 285 aa26.96■■□□□ 1.91
GTF2A1-201ENST00000298173 CYP2C9P11712 490 aa26.96■■□□□ 1.91
GTF2A1-201ENST00000298173 MTIF2P46199 727 aaKnown RBP26.96■■□□□ 1.91
GTF2A1-201ENST00000298173 TRIM59Q8IWR1 403 aa26.96■■□□□ 1.91
GTF2A1-201ENST00000298173 ZBTB8OSQ8IWT0 167 aa26.96■■□□□ 1.91
GTF2A1-201ENST00000298173 PBX1P40424 430 aa26.95■■□□□ 1.91
GTF2A1-201ENST00000298173 GPC3P51654 580 aa26.95■■□□□ 1.91
GTF2A1-201ENST00000298173 CDC42EP1Q00587 391 aa26.95■■□□□ 1.91
GTF2A1-201ENST00000298173 RUFY4Q6ZNE9 571 aa26.95■■□□□ 1.91
GTF2A1-201ENST00000298173 A0A087WZ62 844 aa26.95■■□□□ 1.9
GTF2A1-201ENST00000298173 HNRNPDLO14979 420 aaKnown RBP26.95■■□□□ 1.9
GTF2A1-201ENST00000298173 CABYRO75952 493 aa26.95■■□□□ 1.9
GTF2A1-201ENST00000298173 PSMC2P35998 433 aaKnown RBP26.95■■□□□ 1.9
GTF2A1-201ENST00000298173 ACLYP53396 1101 aa26.95■■□□□ 1.9
GTF2A1-201ENST00000298173 MBTD1Q05BQ5 628 aa26.95■■□□□ 1.9
GTF2A1-201ENST00000298173 MAN2A1Q16706 1144 aa26.95■■□□□ 1.9
GTF2A1-201ENST00000298173 CCDC40Q4G0X9 1142 aa26.95■■□□□ 1.9
GTF2A1-201ENST00000298173 CEP135Q66GS9 1140 aa26.95■■□□□ 1.9
GTF2A1-201ENST00000298173 ZNF410Q86VK4 478 aa26.95■■□□□ 1.9
GTF2A1-201ENST00000298173 VSTM4Q8IW00 320 aa26.95■■□□□ 1.9
GTF2A1-201ENST00000298173 ZNF668Q96K58 619 aaPredicted RBP26.95■■□□□ 1.9
GTF2A1-201ENST00000298173 FDXACB1Q9BRP7 624 aaPredicted RBP26.95■■□□□ 1.9
GTF2A1-201ENST00000298173 NOC4LQ9BVI4 516 aaKnown RBP26.95■■□□□ 1.9
GTF2A1-201ENST00000298173 UNC93B1Q9H1C4 597 aa26.95■■□□□ 1.9
GTF2A1-201ENST00000298173 MINDY3Q9H8M7 445 aa26.95■■□□□ 1.9
GTF2A1-201ENST00000298173 METTL14Q9HCE5 456 aaKnown RBP26.95■■□□□ 1.9
GTF2A1-201ENST00000298173 PAK6Q9NQU5 681 aaPredicted RBP26.95■■□□□ 1.9
GTF2A1-201ENST00000298173 HSPBP1Q9NZL4 362 aa26.95■■□□□ 1.9
GTF2A1-201ENST00000298173 MOXD2PA6NHM9 499 aa26.94■■□□□ 1.9
GTF2A1-201ENST00000298173 LGALS16A8MUM7 142 aa26.94■■□□□ 1.9
GTF2A1-201ENST00000298173 HSPA8P11142 646 aaKnown RBP26.94■■□□□ 1.9
GTF2A1-201ENST00000298173 PRKCSHP14314 528 aaPredicted RBP26.94■■□□□ 1.9
GTF2A1-201ENST00000298173 GARTP22102 1010 aa26.94■■□□□ 1.9
GTF2A1-201ENST00000298173 CYP2J2P51589 502 aa26.94■■□□□ 1.9
GTF2A1-201ENST00000298173 MCCD1P59942 119 aaPredicted RBP26.94■■□□□ 1.9
GTF2A1-201ENST00000298173 MAPK6Q16659 721 aa26.94■■□□□ 1.9
GTF2A1-201ENST00000298173 ARMCX5Q6P1M9 558 aa26.94■■□□□ 1.9
GTF2A1-201ENST00000298173 ZPBP2Q6X784 338 aa26.94■■□□□ 1.9
GTF2A1-201ENST00000298173 ADAMTS10Q9H324 1103 aa26.94■■□□□ 1.9
GTF2A1-201ENST00000298173 PCIF1Q9H4Z3 704 aa26.94■■□□□ 1.9
GTF2A1-201ENST00000298173 USP20Q9Y2K6 914 aa26.94■■□□□ 1.9
GTF2A1-201ENST00000298173 ACKR2O00590 384 aa26.93■■□□□ 1.9
GTF2A1-201ENST00000298173 GPR32O75388 356 aa26.93■■□□□ 1.9
GTF2A1-201ENST00000298173 MYCNP04198 464 aaPredicted RBP26.93■■□□□ 1.9
GTF2A1-201ENST00000298173 IQCF3P0C7M6 154 aa26.93■■□□□ 1.9
GTF2A1-201ENST00000298173 PHKA2P46019 1235 aa26.93■■□□□ 1.9
GTF2A1-201ENST00000298173 NLRP11P59045 1033 aaKnown RBP26.93■■□□□ 1.9
GTF2A1-201ENST00000298173 FAM187BQ17R55 369 aa26.93■■□□□ 1.9
GTF2A1-201ENST00000298173 VWA3BQ502W6 1294 aa26.93■■□□□ 1.9
GTF2A1-201ENST00000298173 XXYLT1Q8NBI6 393 aa26.93■■□□□ 1.9
GTF2A1-201ENST00000298173 TARS2Q9BW92 718 aaKnown RBP26.93■■□□□ 1.9
GTF2A1-201ENST00000298173 ARMCX3Q9UH62 379 aaPredicted RBP26.93■■□□□ 1.9
GTF2A1-201ENST00000298173 FRMD4BQ9Y2L6 1034 aa26.93■■□□□ 1.9
GTF2A1-201ENST00000298173 TTLL13PA6NNM8 815 aa26.92■■□□□ 1.9
GTF2A1-201ENST00000298173 MAPK13O15264 365 aa26.92■■□□□ 1.9
GTF2A1-201ENST00000298173 EXOC3O60645 756 aa26.92■■□□□ 1.9
GTF2A1-201ENST00000298173 EPB41P11171 864 aaKnown RBP26.92■■□□□ 1.9
GTF2A1-201ENST00000298173 LIG4P49917 911 aa26.92■■□□□ 1.9
GTF2A1-201ENST00000298173 SLC9C1Q4G0N8 1177 aa26.92■■□□□ 1.9
GTF2A1-201ENST00000298173 GDF6Q6KF10 455 aaPredicted RBP26.92■■□□□ 1.9
GTF2A1-201ENST00000298173 SPC24Q8NBT2 197 aa26.92■■□□□ 1.9
GTF2A1-201ENST00000298173 ARRDC4Q8NCT1 418 aa26.92■■□□□ 1.9
GTF2A1-201ENST00000298173 FBXL18Q96ME1 805 aa26.92■■□□□ 1.9
GTF2A1-201ENST00000298173 FAM49AQ9H0Q0 323 aaPredicted RBP26.92■■□□□ 1.9
GTF2A1-201ENST00000298173 NDST4Q9H3R1 872 aa26.92■■□□□ 1.9
GTF2A1-201ENST00000298173 PRKCBP05771 671 aa26.92■■□□□ 1.9
GTF2A1-201ENST00000298173 FAM186BQ8IYM0 893 aa26.92■■□□□ 1.9
GTF2A1-201ENST00000298173 NME8Q8N427 588 aa26.92■■□□□ 1.9
GTF2A1-201ENST00000298173 ZSWIM2Q8NEG5 633 aa26.92■■□□□ 1.9
GTF2A1-201ENST00000298173 DNAJB3Q8WWF6 145 aa26.92■■□□□ 1.9
GTF2A1-201ENST00000298173 BICD1Q96G01 975 aa26.92■■□□□ 1.9
GTF2A1-201ENST00000298173 MRPL4Q9BYD3 311 aaKnown RBP26.92■■□□□ 1.9
GTF2A1-201ENST00000298173 TPM2P07951 284 aa26.91■■□□□ 1.9
GTF2A1-201ENST00000298173 MTFR1Q15390 333 aa26.91■■□□□ 1.9
GTF2A1-201ENST00000298173 PTPN21Q16825 1174 aa26.91■■□□□ 1.9
GTF2A1-201ENST00000298173 SLFN12LQ6IEE8 588 aa26.91■■□□□ 1.9
GTF2A1-201ENST00000298173 TAF2Q6P1X5 1199 aa26.91■■□□□ 1.9
GTF2A1-201ENST00000298173 DRC7Q8IY82 874 aa26.91■■□□□ 1.9
GTF2A1-201ENST00000298173 POMGNT1Q8WZA1 660 aa26.91■■□□□ 1.9
GTF2A1-201ENST00000298173 ACO2Q99798 780 aaKnown RBP26.91■■□□□ 1.9
GTF2A1-201ENST00000298173 HAPLN2Q9GZV7 340 aa26.91■■□□□ 1.9
GTF2A1-201ENST00000298173 INO80B-WBP1J3KQ70 363 aa26.9■■□□□ 1.9
GTF2A1-201ENST00000298173 UBXN1Q04323 297 aa26.9■■□□□ 1.9
GTF2A1-201ENST00000298173 AMHR2Q16671 573 aa26.9■■□□□ 1.9
GTF2A1-201ENST00000298173 SRGAP1Q7Z6B7 1085 aa26.9■■□□□ 1.9
GTF2A1-201ENST00000298173 CTU1Q7Z7A3 348 aaKnown RBP26.9■■□□□ 1.9
GTF2A1-201ENST00000298173 ZNF710Q8N1W2 664 aa26.9■■□□□ 1.9
GTF2A1-201ENST00000298173 NLRP7Q8WX94 980 aa26.9■■□□□ 1.9
GTF2A1-201ENST00000298173 ZBTB45Q96K62 511 aaPredicted RBP26.9■■□□□ 1.9
GTF2A1-201ENST00000298173 INO80BQ9C086 356 aaPredicted RBP26.9■■□□□ 1.9
GTF2A1-201ENST00000298173 PRMT7Q9NVM4 692 aaPredicted RBP26.9■■□□□ 1.9
GTF2A1-201ENST00000298173 PTPN11Q06124 597 aaPredicted RBP26.89■■□□□ 1.9
GTF2A1-201ENST00000298173 ITGA7Q13683 1181 aa26.89■■□□□ 1.9
GTF2A1-201ENST00000298173 TSHZ1Q6ZSZ6 1077 aa26.89■■□□□ 1.9
GTF2A1-201ENST00000298173 PPP1R16BQ96T49 567 aa26.89■■□□□ 1.9
GTF2A1-201ENST00000298173 PTPRHQ9HD43 1115 aa26.89■■□□□ 1.9
GTF2A1-201ENST00000298173 IMPACTQ9P2X3 320 aa26.89■■□□□ 1.9
GTF2A1-201ENST00000298173 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.89■■□□□ 1.9
GTF2A1-201ENST00000298173 BRCA2P51587 3418 aa26.89■■□□□ 1.89
GTF2A1-201ENST00000298173 A0A0B4J269 797 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms