RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 TCF25Q9BQ70 676 aa18.21■□□□□ 0.51
NPM1-201ENST00000296930 ENTPD7Q9NQZ7 604 aa18.21■□□□□ 0.51
NPM1-201ENST00000296930 CARNS1A5YM72 827 aa18.2■□□□□ 0.5
NPM1-201ENST00000296930 ZBTB39O15060 712 aa18.2■□□□□ 0.5
NPM1-201ENST00000296930 LYPLA2O95372 231 aa18.2■□□□□ 0.5
NPM1-201ENST00000296930 MCM4P33991 863 aa18.2■□□□□ 0.5
NPM1-201ENST00000296930 TXKP42681 527 aa18.2■□□□□ 0.5
NPM1-201ENST00000296930 ALDH7A1P49419 539 aaKnown RBP18.2■□□□□ 0.5
NPM1-201ENST00000296930 PLPP4Q5VZY2 271 aa18.2■□□□□ 0.5
NPM1-201ENST00000296930 GLB1LQ6UWU2 654 aa18.2■□□□□ 0.5
NPM1-201ENST00000296930 BRAPQ7Z569 592 aa18.2■□□□□ 0.5
NPM1-201ENST00000296930 SLC39A11Q8N1S5 342 aa18.2■□□□□ 0.5
NPM1-201ENST00000296930 FOXP1Q9H334 677 aaPredicted RBP18.2■□□□□ 0.5
NPM1-201ENST00000296930 BMP2KQ9NSY1 1161 aaPredicted RBP18.2■□□□□ 0.5
NPM1-201ENST00000296930 BARX2Q9UMQ3 279 aaPredicted RBP18.2■□□□□ 0.5
NPM1-201ENST00000296930 SRGAP2BP0DMP2 458 aa18.19■□□□□ 0.5
NPM1-201ENST00000296930 TMC7Q7Z402 723 aa18.19■□□□□ 0.5
NPM1-201ENST00000296930 RNF149Q8NC42 400 aa18.19■□□□□ 0.5
NPM1-201ENST00000296930 PGBD4Q96DM1 585 aa18.19■□□□□ 0.5
NPM1-201ENST00000296930 MTMR9Q96QG7 549 aa18.19■□□□□ 0.5
NPM1-201ENST00000296930 ANKEF1Q9NU02 776 aa18.19■□□□□ 0.5
NPM1-201ENST00000296930 WNT7AO00755 349 aa18.19■□□□□ 0.5
NPM1-201ENST00000296930 BCAR1P56945 870 aa18.19■□□□□ 0.5
NPM1-201ENST00000296930 MXD4Q14582 209 aaPredicted RBP18.19■□□□□ 0.5
NPM1-201ENST00000296930 NOSTRINQ8IVI9 506 aa18.19■□□□□ 0.5
NPM1-201ENST00000296930 LPPQ93052 612 aa18.19■□□□□ 0.5
NPM1-201ENST00000296930 MINDY3Q9H8M7 445 aa18.19■□□□□ 0.5
NPM1-201ENST00000296930 C11orf16Q9NQ32 467 aa18.19■□□□□ 0.5
NPM1-201ENST00000296930 PCDHB2Q9Y5E7 798 aa18.19■□□□□ 0.5
NPM1-201ENST00000296930 DCXO43602 365 aa18.18■□□□□ 0.5
NPM1-201ENST00000296930 GNL2Q13823 731 aaKnown RBP18.18■□□□□ 0.5
NPM1-201ENST00000296930 PCBP1Q15365 356 aaKnown RBP eCLIP18.18■□□□□ 0.5
NPM1-201ENST00000296930 LONRF3Q496Y0 759 aa18.18■□□□□ 0.5
NPM1-201ENST00000296930 NOMO2Q5JPE7 1267 aa18.18■□□□□ 0.5
NPM1-201ENST00000296930 CCDC43Q96MW1 224 aaKnown RBP18.18■□□□□ 0.5
NPM1-201ENST00000296930 RAPGEFL1Q9UHV5 662 aa18.18■□□□□ 0.5
NPM1-201ENST00000296930 FAM86C2PA6NEL3 165 aa18.17■□□□□ 0.5
NPM1-201ENST00000296930 ZC3H11AO75152 810 aaKnown RBP eCLIP18.17■□□□□ 0.5
NPM1-201ENST00000296930 DGAT1O75907 488 aa18.17■□□□□ 0.5
NPM1-201ENST00000296930 RNASELQ05823 741 aaKnown RBP18.17■□□□□ 0.5
NPM1-201ENST00000296930 BMS1Q14692 1282 aaKnown RBP18.17■□□□□ 0.5
NPM1-201ENST00000296930 TMEM184AQ6ZMB5 413 aa18.17■□□□□ 0.5
NPM1-201ENST00000296930 VN1R2Q8NFZ6 395 aa18.17■□□□□ 0.5
NPM1-201ENST00000296930 TMEM169Q96HH4 297 aa18.17■□□□□ 0.5
NPM1-201ENST00000296930 XPNPEP1Q9NQW7 623 aa18.17■□□□□ 0.5
NPM1-201ENST00000296930 TBC1D13Q9NVG8 400 aa18.17■□□□□ 0.5
NPM1-201ENST00000296930 MEIS3P2A8K0S8 358 aa18.17■□□□□ 0.5
NPM1-201ENST00000296930 HIDE1A8MVS5 230 aa18.17■□□□□ 0.5
NPM1-201ENST00000296930 OFD1O75665 1012 aa18.17■□□□□ 0.5
NPM1-201ENST00000296930 ERLIN2O94905 339 aa18.17■□□□□ 0.5
NPM1-201ENST00000296930 XRCC6P12956 609 aaKnown RBP eCLIP18.17■□□□□ 0.57e-8■□□□□ 10.6
NPM1-201ENST00000296930 HOXA11P31270 313 aaPredicted RBP18.17■□□□□ 0.5
NPM1-201ENST00000296930 MCM7P33993 719 aa18.17■□□□□ 0.5
NPM1-201ENST00000296930 KRT85P78386 507 aa18.17■□□□□ 0.5
NPM1-201ENST00000296930 KCNC3Q14003 757 aa18.17■□□□□ 0.5
NPM1-201ENST00000296930 TFDP1Q14186 410 aa18.17■□□□□ 0.5
NPM1-201ENST00000296930 SMC1AQ14683 1233 aaKnown RBP18.17■□□□□ 0.5
NPM1-201ENST00000296930 MRPL10Q7Z7H8 261 aaKnown RBP18.17■□□□□ 0.5
NPM1-201ENST00000296930 GDPD2Q9HCC8 539 aa18.17■□□□□ 0.5
NPM1-201ENST00000296930 INPP5FQ9Y2H2 1132 aa18.17■□□□□ 0.5
NPM1-201ENST00000296930 USP15Q9Y4E8 981 aaPredicted RBP18.17■□□□□ 0.5
NPM1-201ENST00000296930 NT5C1B-RDH14C9J2C7 533 aa18.16■□□□□ 0.5
NPM1-201ENST00000296930 NCLP19338 710 aaKnown RBP18.16■□□□□ 0.5
NPM1-201ENST00000296930 ATP2B1P20020 1258 aa18.16■□□□□ 0.5
NPM1-201ENST00000296930 RARRES1P49788 294 aa18.16■□□□□ 0.5
NPM1-201ENST00000296930 PTENP60484 403 aa18.16■□□□□ 0.5
NPM1-201ENST00000296930 RBM10P98175 930 aaKnown RBP18.16■□□□□ 0.5
NPM1-201ENST00000296930 POU5F1BQ06416 359 aa18.16■□□□□ 0.5
NPM1-201ENST00000296930 MRPL43Q8N983 215 aaKnown RBP18.16■□□□□ 0.5
NPM1-201ENST00000296930 URGCPQ8TCY9 931 aa18.16■□□□□ 0.5
NPM1-201ENST00000296930 TMEM60Q9H2L4 133 aa18.16■□□□□ 0.5
NPM1-201ENST00000296930 NRDE2Q9H7Z3 1164 aa18.16■□□□□ 0.5
NPM1-201ENST00000296930 TFIP11Q9UBB9 837 aaKnown RBP18.16■□□□□ 0.5
NPM1-201ENST00000296930 CNTNAP2Q9UHC6 1331 aa18.16■□□□□ 0.5
NPM1-201ENST00000296930 POTEMA6NI47 508 aa18.15■□□□□ 0.5
NPM1-201ENST00000296930 AXLP30530 894 aa18.15■□□□□ 0.5
NPM1-201ENST00000296930 NCBP1Q09161 790 aaKnown RBP18.15■□□□□ 0.5
NPM1-201ENST00000296930 ORC2Q13416 577 aaPredicted RBP18.15■□□□□ 0.5
NPM1-201ENST00000296930 AGMOQ6ZNB7 445 aa18.15■□□□□ 0.5
NPM1-201ENST00000296930 IFNLR1Q8IU57 520 aaPredicted RBP18.15■□□□□ 0.5
NPM1-201ENST00000296930 CNNM3Q8NE01 707 aa18.15■□□□□ 0.5
NPM1-201ENST00000296930 USP28Q96RU2 1077 aa18.15■□□□□ 0.5
NPM1-201ENST00000296930 RSAD1Q9HA92 442 aa18.15■□□□□ 0.5
NPM1-201ENST00000296930 HCN4Q9Y3Q4 1203 aa18.15■□□□□ 0.5
NPM1-201ENST00000296930 PRR33A8MZF0 331 aa18.14■□□□□ 0.5
NPM1-201ENST00000296930 GALTP07902 379 aa18.14■□□□□ 0.5
NPM1-201ENST00000296930 ARL2P36404 184 aa18.14■□□□□ 0.5
NPM1-201ENST00000296930 TECP42680 631 aa18.14■□□□□ 0.5
NPM1-201ENST00000296930 UBXN11Q5T124 520 aa18.14■□□□□ 0.5
NPM1-201ENST00000296930 ATL3Q6DD88 541 aa18.14■□□□□ 0.5
NPM1-201ENST00000296930 ANKRD54Q6NXT1 300 aa18.14■□□□□ 0.5
NPM1-201ENST00000296930 PIGOQ8TEQ8 1089 aa18.14■□□□□ 0.5
NPM1-201ENST00000296930 CCDC51Q96ER9 411 aa18.14■□□□□ 0.5
NPM1-201ENST00000296930 IGSF21Q96ID5 467 aa18.14■□□□□ 0.5
NPM1-201ENST00000296930 TUFT1Q9NNX1 390 aa18.14■□□□□ 0.5
NPM1-201ENST00000296930 KANSL3Q9P2N6 904 aa18.14■□□□□ 0.5
NPM1-201ENST00000296930 C2orf71A6NGG8 1288 aa18.14■□□□□ 0.49
NPM1-201ENST00000296930 GOLGA6L22H0YM25 854 aa18.14■□□□□ 0.49
NPM1-201ENST00000296930 HOXB8P17481 243 aaPredicted RBP18.14■□□□□ 0.49
NPM1-201ENST00000296930 NOTUMQ6P988 496 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms