RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 ERVK-9P63128 1117 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 GHRHRQ02643 423 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 GPS2Q13227 327 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 R3HDM1Q15032 1099 aaKnown RBP12.76□□□□□ -0.37
RHO-201ENST00000296271 PPP2R5AQ15172 486 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 NIPA1Q7RTP0 329 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 SLC47A2Q86VL8 602 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 SLC9A9Q8IVB4 645 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 C4orf19Q8IY42 314 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 KCTD17Q8N5Z5 321 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 CEP170P1Q96L14 293 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 VPS33BQ9H267 617 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 A1CFQ9NQ94 594 aaKnown RBP12.76□□□□□ -0.37
RHO-201ENST00000296271 GGA3Q9NZ52 723 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 TMOD4Q9NZQ9 345 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 WDR81Q562E7 1941 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 PARP14Q460N5 1801 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 CYP26A1O43174 497 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 KRT14P02533 472 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 KCNA2P16389 499 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 CAPN2P17655 700 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 TNFAIP3P21580 790 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 MKRN4PQ13434 485 aaPredicted RBP12.76□□□□□ -0.37
RHO-201ENST00000296271 SNRNP35Q16560 246 aaKnown RBP12.76□□□□□ -0.37
RHO-201ENST00000296271 CCDC70Q6NSX1 233 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 PHLDB2Q86SQ0 1253 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 PPM1KQ8N3J5 372 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 TXLNBQ8N3L3 684 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 SH2D3CQ8N5H7 860 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 NEK9Q8TD19 979 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 MOV10L1Q9BXT6 1211 aaKnown RBP12.76□□□□□ -0.37
RHO-201ENST00000296271 XPNPEP1Q9NQW7 623 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 AMACRQ9UHK6 382 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 TBX20Q9UMR3 447 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 UBE4BO95155 1302 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 DLATP10515 647 aaKnown RBP12.76□□□□□ -0.37
RHO-201ENST00000296271 CHRNB2P17787 502 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 FLT3P36888 993 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 PRPF4BQ13523 1007 aaKnown RBP12.76□□□□□ -0.37
RHO-201ENST00000296271 C2CD6Q53TS8 623 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 KCTD16Q68DU8 428 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 TAS1R3Q7RTX0 852 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 NOP9Q86U38 636 aaKnown RBP12.76□□□□□ -0.37
RHO-201ENST00000296271 NLRX1Q86UT6 975 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 RPUSD2Q8IZ73 545 aaKnown RBP12.76□□□□□ -0.37
RHO-201ENST00000296271 TAS1R2Q8TE23 839 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 SLC16A10Q8TF71 515 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 TATDN2Q93075 761 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 EXOC4Q96A65 974 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 GDF3Q9NR23 364 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 PICK1Q9NRD5 415 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 TSKSQ9UJT2 592 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 TMEM59LQ9UK28 342 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 BTNL10A8MVZ5 291 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 FZD9O00144 591 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 MCM3P25205 808 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 SSTR3P32745 418 aaPredicted RBP12.75□□□□□ -0.37
RHO-201ENST00000296271 NCKAP1LP55160 1127 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 SLFN11Q7Z7L1 901 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 VPS36Q86VN1 386 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 ALG3Q92685 438 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 ZIM3Q96PE6 472 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 AGPAT1Q99943 283 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 TMEM206Q9H813 350 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 VIPAS39Q9H9C1 493 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 ERVK-5Q9HDB9 667 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 CYP39A1Q9NYL5 469 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 SEPT9Q9UHD8 586 aaPredicted RBP12.75□□□□□ -0.37
RHO-201ENST00000296271 SART1O43290 800 aaKnown RBP12.75□□□□□ -0.37
RHO-201ENST00000296271 LYPLA2O95372 231 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 FTLP02792 175 aaPredicted RBP12.75□□□□□ -0.37
RHO-201ENST00000296271 DSG3P32926 999 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 MXI1P50539 228 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 MTERF2Q49AM1 385 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 SEZ6Q53EL9 994 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 TTMPQ5BVD1 217 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 C10orf76Q5T2E6 689 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 LLGL2Q6P1M3 1020 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 INTS8Q75QN2 995 aaKnown RBP12.75□□□□□ -0.37
RHO-201ENST00000296271 SCFD2Q8WU76 684 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 KRT35Q92764 455 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 TMEM143Q96AN5 459 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 TRIM31Q9BZY9 425 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 LRRC4CQ9HCJ2 640 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 KMT5AQ9NQR1 393 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 PCDHA10Q9Y5I2 948 aa12.75□□□□□ -0.37
RHO-201ENST00000296271 KRIT1O00522 736 aa12.74□□□□□ -0.37
RHO-201ENST00000296271 DDX3YO15523 660 aaKnown RBP12.74□□□□□ -0.37
RHO-201ENST00000296271 MMEP08473 750 aa12.74□□□□□ -0.37
RHO-201ENST00000296271 ATP4AP20648 1035 aa12.74□□□□□ -0.37
RHO-201ENST00000296271 ECHS1P30084 290 aa12.74□□□□□ -0.37
RHO-201ENST00000296271 PPATQ06203 517 aa12.74□□□□□ -0.37
RHO-201ENST00000296271 KIF22Q14807 665 aa12.74□□□□□ -0.37
RHO-201ENST00000296271 TREML2Q5T2D2 321 aa12.74□□□□□ -0.37
RHO-201ENST00000296271 EEPD1Q7L9B9 569 aa12.74□□□□□ -0.37
RHO-201ENST00000296271 MSL3Q8N5Y2 521 aaKnown RBP12.74□□□□□ -0.37
RHO-201ENST00000296271 OR2W6PQ8NHA6 318 aa12.74□□□□□ -0.37
RHO-201ENST00000296271 GOLGA5Q8TBA6 731 aa12.74□□□□□ -0.37
RHO-201ENST00000296271 PIK3R5Q8WYR1 880 aa12.74□□□□□ -0.37
RHO-201ENST00000296271 BRCA1P38398 1863 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms