RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 ZBED1O96006 694 aa12.46□□□□□ -0.42
SNIP1-201ENST00000296215 INHBEP58166 350 aa12.46□□□□□ -0.42
SNIP1-201ENST00000296215 SLC39A14Q15043 492 aa12.46□□□□□ -0.42
SNIP1-201ENST00000296215 PERM1Q5SV97 790 aa12.46□□□□□ -0.42
SNIP1-201ENST00000296215 HAUS3Q68CZ6 603 aa12.46□□□□□ -0.42
SNIP1-201ENST00000296215 SLC7A5P1Q8MH63 180 aa12.46□□□□□ -0.42
SNIP1-201ENST00000296215 PPP4R1Q8TF05 950 aa12.46□□□□□ -0.42
SNIP1-201ENST00000296215 C8orf48Q96LL4 319 aa12.46□□□□□ -0.42
SNIP1-201ENST00000296215 C2orf49Q9BVC5 232 aaPredicted RBP12.46□□□□□ -0.42
SNIP1-201ENST00000296215 ACAT2Q9BWD1 397 aa12.46□□□□□ -0.42
SNIP1-201ENST00000296215 CYP4F11Q9HBI6 524 aa12.46□□□□□ -0.42
SNIP1-201ENST00000296215 ZNF277Q9NRM2 450 aaPredicted RBP12.46□□□□□ -0.42
SNIP1-201ENST00000296215 RSL24D1Q9UHA3 163 aaKnown RBP12.46□□□□□ -0.42
SNIP1-201ENST00000296215 LNPEPQ9UIQ6 1025 aa12.46□□□□□ -0.42
SNIP1-201ENST00000296215 STK32CQ86UX6 486 aa12.46□□□□□ -0.42
SNIP1-201ENST00000296215 ZCCHC7Q8N3Z6 543 aaKnown RBP12.46□□□□□ -0.42
SNIP1-201ENST00000296215 PLEKHA5Q9HAU0 1116 aa12.46□□□□□ -0.42
SNIP1-201ENST00000296215 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.46□□□□□ -0.42
SNIP1-201ENST00000296215 ZNF233A6NK53 670 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 ITGAXP20702 1163 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 SARSP49591 514 aaKnown RBP12.45□□□□□ -0.42
SNIP1-201ENST00000296215 PTH1RQ03431 593 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 ANKDD1AQ495B1 522 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 NLRP10Q86W26 655 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 TRPV6Q9H1D0 765 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 ARMCX3Q9UH62 379 aaPredicted RBP12.45□□□□□ -0.42
SNIP1-201ENST00000296215 DBR1Q9UK59 544 aaKnown RBP12.45□□□□□ -0.42
SNIP1-201ENST00000296215 KLHL20Q9Y2M5 609 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 PTPN22Q9Y2R2 807 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 TIAM1Q13009 1591 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 C16orf96A6NNT2 1141 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 CFLARO15519 480 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 ZBTB43O43298 467 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 ENO1P06733 434 aaKnown RBP12.45□□□□□ -0.42
SNIP1-201ENST00000296215 IL32P24001 234 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 GJA9P57773 515 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 PPP2R5CQ13362 524 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 MAPK11Q15759 364 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 ELMOD2Q8IZ81 293 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 ASAP3Q8TDY4 903 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 COG3Q96JB2 828 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 STX18Q9P2W9 335 aaKnown RBP12.45□□□□□ -0.42
SNIP1-201ENST00000296215 PIK3R4Q99570 1358 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 M0R3G1 203 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 FARP2O94887 1054 aaPredicted RBP12.45□□□□□ -0.42
SNIP1-201ENST00000296215 BCL10O95999 233 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 HSPA13P48723 471 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 NR1H2P55055 460 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 SLC9C2Q5TAH2 1124 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 CYP4F22Q6NT55 531 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 ISLR2Q6UXK2 745 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 CCDC81Q6ZN84 652 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 TRMT10CQ7L0Y3 403 aaKnown RBP12.45□□□□□ -0.42
SNIP1-201ENST00000296215 AKAP14Q86UN6 197 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 PIAS4Q8N2W9 510 aaPredicted RBP12.45□□□□□ -0.42
SNIP1-201ENST00000296215 TSPYL6Q8N831 410 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 TTC8Q8TAM2 541 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 INPP5DQ92835 1189 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 MS4A14Q96JA4 679 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 CHP1Q99653 195 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 LSG1Q9H089 658 aaKnown RBP12.45□□□□□ -0.42
SNIP1-201ENST00000296215 ISCUQ9H1K1 167 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 BLZF1Q9H2G9 400 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 NPHS2Q9NP85 383 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 COMMD10Q9Y6G5 202 aa12.45□□□□□ -0.42
SNIP1-201ENST00000296215 A0A1W2PQ72 361 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 SNX3O60493 162 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 FKBP6O75344 327 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 GSSP48637 474 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 ARHGAP4P98171 946 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 TBC1D10BQ4KMP7 808 aaPredicted RBP12.44□□□□□ -0.42
SNIP1-201ENST00000296215 PAPD7Q5XG87 772 aaKnown RBP12.44□□□□□ -0.42
SNIP1-201ENST00000296215 MCM10Q7L590 875 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 TBATAQ96M53 351 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 FERD3LQ96RJ6 166 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 IRF2BPLQ9H1B7 796 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 SESN1Q9Y6P5 492 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 CUX1P39880 1505 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 CALM1P0DP23 149 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 CALM2P0DP24 149 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 CALM3P0DP25 149 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 PSMC3P17980 439 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 IL12RB1P42701 662 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 LGSNQ5TDP6 509 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 LRRC6Q86X45 466 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 CNPY3Q9BT09 278 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 ING2Q9H160 280 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 OSBPL3Q9H4L5 887 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 PKD2L2Q9NZM6 624 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 SNX5Q9Y5X3 404 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 NSD3Q9BZ95 1437 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 CENPXA8MT69 81 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 TTC34A8MYJ7 566 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 H3BRJ5 948 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 PALMO75781 387 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 IDH1O75874 414 aaKnown RBP12.44□□□□□ -0.42
SNIP1-201ENST00000296215 CRYZL1O95825 349 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 SRGAP2CP0DJJ0 459 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 SRGAP2BP0DMP2 458 aa12.44□□□□□ -0.42
SNIP1-201ENST00000296215 CCT3P49368 545 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms