RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 RNF25Q96BH1 459 aaPredicted RBP18.19■□□□□ 0.5
CHRNE-201ENST00000293780 TLCD1Q96CP7 247 aa18.19■□□□□ 0.5
CHRNE-201ENST00000293780 CBWD1Q9BRT8 395 aa18.19■□□□□ 0.5
CHRNE-201ENST00000293780 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.19■□□□□ 0.5
CHRNE-201ENST00000293780 RBBP6Q7Z6E9 1792 aaKnown RBP18.19■□□□□ 0.5
CHRNE-201ENST00000293780 KIAA0391O15091 583 aaKnown RBP18.18■□□□□ 0.5
CHRNE-201ENST00000293780 ATMINO43313 823 aaPredicted RBP18.18■□□□□ 0.5
CHRNE-201ENST00000293780 NPM3O75607 178 aaKnown RBP18.18■□□□□ 0.5
CHRNE-201ENST00000293780 VIL1P09327 827 aaKnown RBP18.18■□□□□ 0.5
CHRNE-201ENST00000293780 PDE6BP35913 854 aa18.18■□□□□ 0.5
CHRNE-201ENST00000293780 PTGIRP43119 386 aa18.18■□□□□ 0.5
CHRNE-201ENST00000293780 SEC16BQ96JE7 1060 aa18.18■□□□□ 0.5
CHRNE-201ENST00000293780 PCDHB18PQ96TA0 734 aa18.18■□□□□ 0.5
CHRNE-201ENST00000293780 PMS2P54278 862 aa18.18■□□□□ 0.5
CHRNE-201ENST00000293780 ACTN3Q08043 901 aaPredicted RBP18.18■□□□□ 0.5
CHRNE-201ENST00000293780 PADI6Q6TGC4 694 aa18.18■□□□□ 0.5
CHRNE-201ENST00000293780 PRELID2Q8N945 189 aa18.18■□□□□ 0.5
CHRNE-201ENST00000293780 PLEKHO2Q8TD55 490 aa18.18■□□□□ 0.5
CHRNE-201ENST00000293780 NAP1L3Q99457 506 aaPredicted RBP18.18■□□□□ 0.5
CHRNE-201ENST00000293780 GGA2Q9UJY4 613 aa18.18■□□□□ 0.5
CHRNE-201ENST00000293780 SLX4Q8IY92 1834 aa18.18■□□□□ 0.5
CHRNE-201ENST00000293780 TLDC2A0PJX2 215 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 SMIM23A6NLE4 172 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 TCP10L2B9ZVM9 353 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 IPO5O00410 1097 aaKnown RBP18.17■□□□□ 0.5
CHRNE-201ENST00000293780 MMP10P09238 476 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 BCRP11274 1271 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 MESDQ14696 234 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 TBC1D10BQ4KMP7 808 aaPredicted RBP18.17■□□□□ 0.5
CHRNE-201ENST00000293780 C1orf220Q5T0J3 134 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 TTC27Q6P3X3 843 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 B3GNT9Q6UX72 402 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 SLC9A9Q8IVB4 645 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 CCDC13Q8IYE1 715 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 UHMK1Q8TAS1 419 aaKnown RBP18.17■□□□□ 0.5
CHRNE-201ENST00000293780 BTBD6Q96KE9 485 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 MYCBPQ99417 103 aaPredicted RBP18.17■□□□□ 0.5
CHRNE-201ENST00000293780 TEKT3Q9BXF9 490 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 OSBPL7Q9BZF2 842 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 VCPKMTQ9H867 229 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 COL11A2P13942 1736 aaPredicted RBP18.17■□□□□ 0.5
CHRNE-201ENST00000293780 LOC102724159A0A0B4J2E5 919 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 TCRBV7S2A1N4TA0A589 114 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 FAM187AA6NFU0 413 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 SGPL1O95470 568 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 PAEPP09466 180 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 COMTP21964 271 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 VAMP7P51809 220 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 MNAT1P51948 309 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 PWP2Q15269 919 aaKnown RBP18.17■□□□□ 0.5
CHRNE-201ENST00000293780 AOC3Q16853 763 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 TRMT1LQ7Z2T5 733 aaKnown RBP18.17■□□□□ 0.5
CHRNE-201ENST00000293780 RHOT2Q8IXI1 618 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 NLGN1Q8N2Q7 840 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 FBXO28Q9NVF7 368 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 GRHL1Q9NZI5 618 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 ATRNL1Q5VV63 1379 aa18.17■□□□□ 0.5
CHRNE-201ENST00000293780 ENTPD3O75355 529 aa18.16■□□□□ 0.5
CHRNE-201ENST00000293780 RPL21P46778 160 aaKnown RBP18.16■□□□□ 0.5
CHRNE-201ENST00000293780 DHX34Q14147 1143 aaKnown RBP18.16■□□□□ 0.5
CHRNE-201ENST00000293780 SLC29A2Q14542 456 aa18.16■□□□□ 0.5
CHRNE-201ENST00000293780 SWT1Q5T5J6 900 aaKnown RBP18.16■□□□□ 0.5
CHRNE-201ENST00000293780 MSL1Q68DK7 614 aa18.16■□□□□ 0.5
CHRNE-201ENST00000293780 CCDC121Q6ZUS5 278 aa18.16■□□□□ 0.5
CHRNE-201ENST00000293780 WDR11Q9BZH6 1224 aa18.16■□□□□ 0.5
CHRNE-201ENST00000293780 PABPC3Q9H361 631 aaKnown RBP18.16■□□□□ 0.5
CHRNE-201ENST00000293780 ARHGEF10LQ9HCE6 1279 aa18.16■□□□□ 0.5
CHRNE-201ENST00000293780 KCND2Q9NZV8 630 aa18.16■□□□□ 0.5
CHRNE-201ENST00000293780 PHF2O75151 1096 aa18.16■□□□□ 0.5
CHRNE-201ENST00000293780 EIF3BP55884 814 aaKnown RBP18.16■□□□□ 0.5
CHRNE-201ENST00000293780 FKBP1AP62942 108 aaKnown RBP18.16■□□□□ 0.5
CHRNE-201ENST00000293780 GPC5P78333 572 aa18.16■□□□□ 0.5
CHRNE-201ENST00000293780 SF3A3Q12874 501 aaKnown RBP eCLIP18.16■□□□□ 0.5
CHRNE-201ENST00000293780 CABS1Q96KC9 395 aa18.16■□□□□ 0.5
CHRNE-201ENST00000293780 ZSWIM1Q9BR11 485 aa18.16■□□□□ 0.5
CHRNE-201ENST00000293780 RANBP17Q9H2T7 1088 aaKnown RBP18.16■□□□□ 0.5
CHRNE-201ENST00000293780 SEMA4AQ9H3S1 761 aa18.16■□□□□ 0.5
CHRNE-201ENST00000293780 TMX2Q9Y320 296 aa18.16■□□□□ 0.5
CHRNE-201ENST00000293780 RPTORQ8N122 1335 aa18.16■□□□□ 0.5
CHRNE-201ENST00000293780 C5orf60A6NFR6 353 aa18.15■□□□□ 0.5
CHRNE-201ENST00000293780 DNM1LO00429 736 aa18.15■□□□□ 0.5
CHRNE-201ENST00000293780 PYGMP11217 842 aa18.15■□□□□ 0.5
CHRNE-201ENST00000293780 CHRNB2P17787 502 aa18.15■□□□□ 0.5
CHRNE-201ENST00000293780 ITGB5P18084 799 aa18.15■□□□□ 0.5
CHRNE-201ENST00000293780 PEX5P50542 639 aa18.15■□□□□ 0.5
CHRNE-201ENST00000293780 IFI35P80217 286 aaPredicted RBP18.15■□□□□ 0.5
CHRNE-201ENST00000293780 LLGL1Q15334 1064 aa18.15■□□□□ 0.5
CHRNE-201ENST00000293780 PPP2R5EQ16537 467 aa18.15■□□□□ 0.5
CHRNE-201ENST00000293780 EPC2Q52LR7 807 aa18.15■□□□□ 0.5
CHRNE-201ENST00000293780 CEP89Q96ST8 783 aa18.15■□□□□ 0.5
CHRNE-201ENST00000293780 CLRN2A0PK11 232 aa18.15■□□□□ 0.5
CHRNE-201ENST00000293780 TMEM150BA6NC51 233 aa18.15■□□□□ 0.5
CHRNE-201ENST00000293780 ANKRD63C9JTQ0 380 aa18.15■□□□□ 0.5
CHRNE-201ENST00000293780 DRD4P21917 467 aa18.15■□□□□ 0.5
CHRNE-201ENST00000293780 MKRN4PQ13434 485 aaPredicted RBP18.15■□□□□ 0.5
CHRNE-201ENST00000293780 GRIPAP1Q4V328 841 aa18.15■□□□□ 0.5
CHRNE-201ENST00000293780 C11orf63Q6NUN7 778 aa18.15■□□□□ 0.5
CHRNE-201ENST00000293780 INTS8Q75QN2 995 aaKnown RBP18.15■□□□□ 0.5
CHRNE-201ENST00000293780 NOP9Q86U38 636 aaKnown RBP18.15■□□□□ 0.5
CHRNE-201ENST00000293780 UBL4BQ8N7F7 174 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms