RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 KRT33BQ14525 404 aa19.78■□□□□ 0.76
PCDH1-201ENST00000287008 RASSF4Q9H2L5 321 aa19.78■□□□□ 0.76
PCDH1-201ENST00000287008 ABHD10Q9NUJ1 306 aa19.78■□□□□ 0.76
PCDH1-201ENST00000287008 UBE2Q2LH0YL09 131 aa19.77■□□□□ 0.76
PCDH1-201ENST00000287008 IRX4P78413 519 aa19.77■□□□□ 0.76
PCDH1-201ENST00000287008 GLT1D1Q96MS3 346 aa19.77■□□□□ 0.76
PCDH1-201ENST00000287008 BAIAP2L1Q9UHR4 511 aa19.77■□□□□ 0.76
PCDH1-201ENST00000287008 NCOA3Q9Y6Q9 1424 aa19.77■□□□□ 0.76
PCDH1-201ENST00000287008 MYO3AQ8NEV4 1616 aa19.77■□□□□ 0.76
PCDH1-201ENST00000287008 SUN1O94901 812 aa19.77■□□□□ 0.76
PCDH1-201ENST00000287008 SMARCA1P28370 1054 aa19.77■□□□□ 0.76
PCDH1-201ENST00000287008 EFHC2Q5JST6 749 aa19.77■□□□□ 0.76
PCDH1-201ENST00000287008 BTBD8Q5XKL5 378 aa19.77■□□□□ 0.76
PCDH1-201ENST00000287008 ZNF746Q6NUN9 644 aaPredicted RBP19.77■□□□□ 0.76
PCDH1-201ENST00000287008 PRMT6Q96LA8 375 aaPredicted RBP19.77■□□□□ 0.76
PCDH1-201ENST00000287008 HEMGNQ9BXL5 484 aa19.77■□□□□ 0.76
PCDH1-201ENST00000287008 PPRC1Q5VV67 1664 aaKnown RBP19.77■□□□□ 0.76
PCDH1-201ENST00000287008 PODXLO00592 558 aa19.77■□□□□ 0.75
PCDH1-201ENST00000287008 MOCS2O96007 188 aaPredicted RBP19.77■□□□□ 0.75
PCDH1-201ENST00000287008 RAD51Q06609 339 aa19.77■□□□□ 0.75
PCDH1-201ENST00000287008 FAM102AQ5T9C2 384 aaPredicted RBP19.77■□□□□ 0.75
PCDH1-201ENST00000287008 CALR3Q96L12 384 aaKnown RBP19.77■□□□□ 0.75
PCDH1-201ENST00000287008 MAP3K14Q99558 947 aa19.77■□□□□ 0.75
PCDH1-201ENST00000287008 FSD1LQ9BXM9 530 aa19.77■□□□□ 0.75
PCDH1-201ENST00000287008 JMJD4Q9H9V9 463 aa19.77■□□□□ 0.75
PCDH1-201ENST00000287008 IRAK4Q9NWZ3 460 aa19.77■□□□□ 0.75
PCDH1-201ENST00000287008 FRMPD1Q5SYB0 1578 aa19.77■□□□□ 0.75
PCDH1-201ENST00000287008 CREB3O43889 395 aa19.76■□□□□ 0.75
PCDH1-201ENST00000287008 PAMP19021 973 aa19.76■□□□□ 0.75
PCDH1-201ENST00000287008 KIAA1755Q5JYT7 1200 aa19.76■□□□□ 0.75
PCDH1-201ENST00000287008 FRMD5Q7Z6J6 570 aa19.76■□□□□ 0.75
PCDH1-201ENST00000287008 MOSPD1Q9UJG1 213 aa19.76■□□□□ 0.75
PCDH1-201ENST00000287008 AGAP1Q9UPQ3 857 aa19.76■□□□□ 0.75
PCDH1-201ENST00000287008 STK38LQ9Y2H1 464 aa19.76■□□□□ 0.75
PCDH1-201ENST00000287008 ADARB2Q9NS39 739 aaKnown RBP19.76■□□□□ 0.75
PCDH1-201ENST00000287008 ERAP1Q9NZ08 941 aa19.76■□□□□ 0.75
PCDH1-201ENST00000287008 RASGRF2O14827 1237 aa19.76■□□□□ 0.75
PCDH1-201ENST00000287008 FTLP02792 175 aaPredicted RBP19.76■□□□□ 0.75
PCDH1-201ENST00000287008 CYP2C9P11712 490 aa19.76■□□□□ 0.75
PCDH1-201ENST00000287008 ERO1BQ86YB8 467 aa19.76■□□□□ 0.75
PCDH1-201ENST00000287008 PDE11AQ9HCR9 933 aa19.76■□□□□ 0.75
PCDH1-201ENST00000287008 ATXN8OSP0DMR3 200 aa19.76■□□□□ 0.75
PCDH1-201ENST00000287008 RBP5P82980 135 aa19.76■□□□□ 0.75
PCDH1-201ENST00000287008 PHLDB3Q6NSJ2 640 aa19.76■□□□□ 0.75
PCDH1-201ENST00000287008 KLC3Q6P597 504 aa19.76■□□□□ 0.75
PCDH1-201ENST00000287008 ZNF564Q8TBZ8 553 aaPredicted RBP19.76■□□□□ 0.75
PCDH1-201ENST00000287008 AGBL1Q96MI9 1066 aa19.76■□□□□ 0.75
PCDH1-201ENST00000287008 MXRA8Q9BRK3 442 aa19.76■□□□□ 0.75
PCDH1-201ENST00000287008 TBK1Q9UHD2 729 aa19.76■□□□□ 0.75
PCDH1-201ENST00000287008 RPS6KA5O75582 802 aa19.75■□□□□ 0.75
PCDH1-201ENST00000287008 PALMO75781 387 aa19.75■□□□□ 0.75
PCDH1-201ENST00000287008 SLCO1A2P46721 670 aa19.75■□□□□ 0.75
PCDH1-201ENST00000287008 CFAP61Q8NHU2 1237 aa19.75■□□□□ 0.75
PCDH1-201ENST00000287008 WHAMMQ8TF30 809 aa19.75■□□□□ 0.75
PCDH1-201ENST00000287008 CFAP36Q96G28 342 aa19.75■□□□□ 0.75
PCDH1-201ENST00000287008 SIK2Q9H0K1 926 aa19.75■□□□□ 0.75
PCDH1-201ENST00000287008 KCND2Q9NZV8 630 aa19.75■□□□□ 0.75
PCDH1-201ENST00000287008 HBP1O60381 514 aa19.75■□□□□ 0.75
PCDH1-201ENST00000287008 SRGNP10124 158 aa19.75■□□□□ 0.75
PCDH1-201ENST00000287008 RALAP11233 206 aa19.75■□□□□ 0.75
PCDH1-201ENST00000287008 PAPOLAP51003 745 aaKnown RBP19.75■□□□□ 0.75
PCDH1-201ENST00000287008 GTF2A2P52657 109 aa19.75■□□□□ 0.75
PCDH1-201ENST00000287008 RPS6P62753 249 aaKnown RBP19.75■□□□□ 0.75
PCDH1-201ENST00000287008 LMBRD2Q68DH5 695 aaPredicted RBP19.75■□□□□ 0.75
PCDH1-201ENST00000287008 RNF25Q96BH1 459 aaPredicted RBP19.75■□□□□ 0.75
PCDH1-201ENST00000287008 POLLQ9UGP5 575 aa19.75■□□□□ 0.75
PCDH1-201ENST00000287008 FBXO2Q9UK22 296 aaPredicted RBP19.75■□□□□ 0.75
PCDH1-201ENST00000287008 SNX9Q9Y5X1 595 aa19.75■□□□□ 0.75
PCDH1-201ENST00000287008 RFC5P40937 340 aa19.75■□□□□ 0.75
PCDH1-201ENST00000287008 BCAR1P56945 870 aa19.75■□□□□ 0.75
PCDH1-201ENST00000287008 PRKCEQ02156 737 aa19.75■□□□□ 0.75
PCDH1-201ENST00000287008 GLB1LQ6UWU2 654 aa19.75■□□□□ 0.75
PCDH1-201ENST00000287008 FAM205CA6NFA0 338 aa19.75■□□□□ 0.75
PCDH1-201ENST00000287008 RNF10Q8N5U6 811 aaKnown RBP19.75■□□□□ 0.75
PCDH1-201ENST00000287008 NRXN1Q9ULB1 1477 aa19.75■□□□□ 0.75
PCDH1-201ENST00000287008 CCDC151A5D8V7 595 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 KRT37O76014 449 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 CAP2P40123 477 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 BPIFA3Q9BQP9 254 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 MAGEB5Q9BZ81 275 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 EDEM3Q9BZQ6 932 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 FAM8A1Q9UBU6 413 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 TADA2AO75478 443 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 ARL4CP56559 192 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 CCDC38Q502W7 563 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 TTC30AQ86WT1 665 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 DEPDC1BQ8WUY9 529 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 ABCF3Q9NUQ8 709 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 IP6K2Q9UHH9 426 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 ZKSCAN8Q15776 578 aaPredicted RBP19.74■□□□□ 0.75
PCDH1-201ENST00000287008 CC2D1AQ6P1N0 951 aaPredicted RBP19.74■□□□□ 0.75
PCDH1-201ENST00000287008 ZKSCAN4Q969J2 545 aaPredicted RBP19.74■□□□□ 0.75
PCDH1-201ENST00000287008 IFT43Q96FT9 208 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 CYP26B1Q9NR63 512 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 FBXO28Q9NVF7 368 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 PXDNLA1KZ92 1463 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 RIMBP3CA6NJZ7 1639 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 RIMBP3BA6NNM3 1639 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 RIMBP3Q9UFD9 1639 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 KLRK1P26718 216 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms