RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 ATXN2LQ8WWM7 1075 aaKnown RBP11.34□□□□□ -0.59
ERCC3-201ENST00000285398 SEC14L1Q92503 715 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 TBC1D5Q92609 795 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 PGM2Q96G03 612 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 SELENOSQ9BQE4 189 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.34□□□□□ -0.59
ERCC3-201ENST00000285398 CCDC134Q9H6E4 229 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 RPAP3Q9H6T3 665 aaPredicted RBP11.34□□□□□ -0.59
ERCC3-201ENST00000285398 HOMER2Q9NSB8 354 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 INTS9Q9NV88 658 aaKnown RBP11.34□□□□□ -0.59
ERCC3-201ENST00000285398 PCDHA6Q9UN73 950 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 PCDHA8Q9Y5H6 950 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 A6NHS1 94 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 TLR2O60603 784 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 CAND2O75155 1236 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 AP1G2O75843 785 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 VIMP08670 466 aaKnown RBP11.34□□□□□ -0.59
ERCC3-201ENST00000285398 KCNJ2P63252 427 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 LACTBP83111 547 aaPredicted RBP11.34□□□□□ -0.59
ERCC3-201ENST00000285398 LRRC63Q05C16 580 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 LRRC55Q6ZSA7 311 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 CROCCP2Q86T23 111 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 LRRC34Q8IZ02 419 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 HPS3Q969F9 1004 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 AP1M1Q9BXS5 423 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 DDX47Q9H0S4 455 aaKnown RBP11.34□□□□□ -0.59
ERCC3-201ENST00000285398 NLRC4Q9NPP4 1024 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 ZFATQ9P243 1243 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 CSADQ9Y600 493 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 PPFIA2O75334 1257 aa11.33□□□□□ -0.59
ERCC3-201ENST00000285398 FERP16591 822 aa11.33□□□□□ -0.59
ERCC3-201ENST00000285398 HOXA13P31271 388 aaPredicted RBP11.33□□□□□ -0.59
ERCC3-201ENST00000285398 PDE6CP51160 858 aa11.33□□□□□ -0.59
ERCC3-201ENST00000285398 NCALDP61601 193 aa11.33□□□□□ -0.59
ERCC3-201ENST00000285398 PDCD2Q16342 344 aaPredicted RBP11.33□□□□□ -0.59
ERCC3-201ENST00000285398 CCDC38Q502W7 563 aa11.33□□□□□ -0.59
ERCC3-201ENST00000285398 GALNT17Q6IS24 598 aa11.33□□□□□ -0.59
ERCC3-201ENST00000285398 APLFQ8IW19 511 aaPredicted RBP11.33□□□□□ -0.59
ERCC3-201ENST00000285398 KLHL29Q96CT2 875 aa11.33□□□□□ -0.59
ERCC3-201ENST00000285398 AGBL1Q96MI9 1066 aa11.33□□□□□ -0.59
ERCC3-201ENST00000285398 FMO2Q99518 471 aa11.33□□□□□ -0.59
ERCC3-201ENST00000285398 KIAA1683Q9H0B3 1180 aa11.33□□□□□ -0.59
ERCC3-201ENST00000285398 RAB17Q9H0T7 212 aa11.33□□□□□ -0.59
ERCC3-201ENST00000285398 ECT2Q9H8V3 914 aa11.33□□□□□ -0.59
ERCC3-201ENST00000285398 AMACRQ9UHK6 382 aa11.33□□□□□ -0.59
ERCC3-201ENST00000285398 AGAP1Q9UPQ3 857 aa11.33□□□□□ -0.59
ERCC3-201ENST00000285398 ATP8A1Q9Y2Q0 1164 aa11.33□□□□□ -0.59
ERCC3-201ENST00000285398 NOC2LQ9Y3T9 749 aaKnown RBP11.33□□□□□ -0.59
ERCC3-201ENST00000285398 NUDT17P0C025 328 aa11.33□□□□□ -0.6
ERCC3-201ENST00000285398 OR52Z1P0C646 297 aa11.33□□□□□ -0.6
ERCC3-201ENST00000285398 RARAP10276 462 aa11.33□□□□□ -0.6
ERCC3-201ENST00000285398 KCNMA1Q12791 1236 aa11.33□□□□□ -0.6
ERCC3-201ENST00000285398 TREML2Q5T2D2 321 aa11.33□□□□□ -0.6
ERCC3-201ENST00000285398 THEMIS2Q5TEJ8 643 aa11.33□□□□□ -0.6
ERCC3-201ENST00000285398 GUF1Q8N442 669 aaKnown RBP11.33□□□□□ -0.6
ERCC3-201ENST00000285398 ABCF3Q9NUQ8 709 aa11.33□□□□□ -0.6
ERCC3-201ENST00000285398 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.33□□□□□ -0.6
ERCC3-201ENST00000285398 IGF2BP3O00425 579 aaKnown RBP eCLIP11.33□□□□□ -0.6
ERCC3-201ENST00000285398 UBOX5O94941 541 aa11.33□□□□□ -0.6
ERCC3-201ENST00000285398 CDC25CP30307 473 aa11.33□□□□□ -0.6
ERCC3-201ENST00000285398 HOXA7P31268 230 aaPredicted RBP11.33□□□□□ -0.6
ERCC3-201ENST00000285398 RPS6KA3P51812 740 aa11.33□□□□□ -0.6
ERCC3-201ENST00000285398 COPS2P61201 443 aa11.33□□□□□ -0.6
ERCC3-201ENST00000285398 FOXR2Q6PJQ5 311 aa11.33□□□□□ -0.6
ERCC3-201ENST00000285398 MFN1Q8IWA4 741 aa11.33□□□□□ -0.6
ERCC3-201ENST00000285398 P2RX7Q99572 595 aaKnown RBP11.33□□□□□ -0.6
ERCC3-201ENST00000285398 ZMYND12Q9H0C1 365 aa11.33□□□□□ -0.6
ERCC3-201ENST00000285398 ADAMTS1Q9UHI8 967 aa11.33□□□□□ -0.6
ERCC3-201ENST00000285398 AFG3L2Q9Y4W6 797 aa11.33□□□□□ -0.6
ERCC3-201ENST00000285398 ATAD5Q96QE3 1844 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 SCN4AP35499 1836 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 A0A087X0T9 212 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 DCAF8L1A6NGE4 600 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 LINGO3P0C6S8 592 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 FAM228BP0C875 321 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 IREB2P48200 963 aaKnown RBP11.32□□□□□ -0.6
ERCC3-201ENST00000285398 PAPOLAP51003 745 aaKnown RBP11.32□□□□□ -0.6
ERCC3-201ENST00000285398 RAB27AP51159 221 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 KLHL30Q0D2K2 578 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 TAF11Q15544 211 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 UNC13DQ70J99 1090 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 ERICH1Q86X53 443 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 ATG4CQ96DT6 458 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 NAF1Q96HR8 494 aaKnown RBP11.32□□□□□ -0.6
ERCC3-201ENST00000285398 TSC22D3Q99576 134 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 PRMT1Q99873 361 aaKnown RBP11.32□□□□□ -0.6
ERCC3-201ENST00000285398 OSBPL1AQ9BXW6 950 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 STMN4Q9H169 189 aaPredicted RBP11.32□□□□□ -0.6
ERCC3-201ENST00000285398 MYH7BA7E2Y1 1941 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 PVALEFA0A1B0GWK0 134 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 ABLIM1O14639 778 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 RGS16O15492 202 aaPredicted RBP11.32□□□□□ -0.6
ERCC3-201ENST00000285398 TTI1O43156 1089 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 EVI5O60447 810 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 SNX3O60493 162 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 NOL4O94818 638 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 CELF2O95319 508 aaKnown RBP11.32□□□□□ -0.6
ERCC3-201ENST00000285398 ATP4AP20648 1035 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 MSH2P43246 934 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 GALNTL6Q49A17 601 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms