RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 SEZ6LQ9BYH1 1024 aa20.73■□□□□ 0.91
PDLIM3-202ENST00000284770 CLIC2O15247 247 aa20.72■□□□□ 0.91
PDLIM3-202ENST00000284770 TFRCP02786 760 aaKnown RBP20.72■□□□□ 0.91
PDLIM3-202ENST00000284770 NR3C1P04150 777 aa20.72■□□□□ 0.91
PDLIM3-202ENST00000284770 RPLP2P05387 115 aaKnown RBP20.72■□□□□ 0.91
PDLIM3-202ENST00000284770 CDK11BP21127 795 aaKnown RBP20.72■□□□□ 0.91
PDLIM3-202ENST00000284770 NR2F2P24468 414 aa20.72■□□□□ 0.91
PDLIM3-202ENST00000284770 RPL13P26373 211 aaKnown RBP20.72■□□□□ 0.91
PDLIM3-202ENST00000284770 TMEM62Q0P6H9 643 aa20.72■□□□□ 0.91
PDLIM3-202ENST00000284770 KIZQ2M2Z5 673 aa20.72■□□□□ 0.91
PDLIM3-202ENST00000284770 TMEM174Q8WUU8 243 aa20.72■□□□□ 0.91
PDLIM3-202ENST00000284770 CEP63Q96MT8 703 aa20.72■□□□□ 0.91
PDLIM3-202ENST00000284770 SCLT1Q96NL6 688 aa20.72■□□□□ 0.91
PDLIM3-202ENST00000284770 FZD8Q9H461 694 aa20.72■□□□□ 0.91
PDLIM3-202ENST00000284770 INO80B-WBP1J3KQ70 363 aa20.72■□□□□ 0.91
PDLIM3-202ENST00000284770 ARVCFO00192 962 aa20.72■□□□□ 0.91
PDLIM3-202ENST00000284770 HNRNPDLO14979 420 aaKnown RBP20.72■□□□□ 0.91
PDLIM3-202ENST00000284770 MBTD1Q05BQ5 628 aa20.72■□□□□ 0.91
PDLIM3-202ENST00000284770 RPAINQ86UA6 219 aa20.72■□□□□ 0.91
PDLIM3-202ENST00000284770 RSPH3Q86UC2 560 aa20.72■□□□□ 0.91
PDLIM3-202ENST00000284770 BICD1Q96G01 975 aa20.72■□□□□ 0.91
PDLIM3-202ENST00000284770 INO80BQ9C086 356 aaPredicted RBP20.72■□□□□ 0.91
PDLIM3-202ENST00000284770 MINDY3Q9H8M7 445 aa20.72■□□□□ 0.91
PDLIM3-202ENST00000284770 TRIP12Q14669 1992 aaPredicted RBP20.71■□□□□ 0.91
PDLIM3-202ENST00000284770 CETN3O15182 167 aa20.71■□□□□ 0.91
PDLIM3-202ENST00000284770 PIGRP01833 764 aa20.71■□□□□ 0.91
PDLIM3-202ENST00000284770 PRKCBP05771 671 aa20.71■□□□□ 0.91
PDLIM3-202ENST00000284770 MYBPC2Q14324 1141 aa20.71■□□□□ 0.91
PDLIM3-202ENST00000284770 SRGAP1Q7Z6B7 1085 aa20.71■□□□□ 0.91
PDLIM3-202ENST00000284770 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.71■□□□□ 0.91
PDLIM3-202ENST00000284770 FILIP1Q7Z7B0 1213 aa20.71■□□□□ 0.91
PDLIM3-202ENST00000284770 SLC9A9Q8IVB4 645 aa20.71■□□□□ 0.91
PDLIM3-202ENST00000284770 FAM114A1Q8IWE2 563 aa20.71■□□□□ 0.91
PDLIM3-202ENST00000284770 C12orf56Q8IXR9 622 aa20.71■□□□□ 0.91
PDLIM3-202ENST00000284770 TRMT13Q9NUP7 481 aaKnown RBP20.71■□□□□ 0.91
PDLIM3-202ENST00000284770 DMAC2Q9NW81 257 aa20.71■□□□□ 0.91
PDLIM3-202ENST00000284770 IFNKQ9P0W0 207 aa20.71■□□□□ 0.91
PDLIM3-202ENST00000284770 TISP43B9A030 160 aa20.7■□□□□ 0.9
PDLIM3-202ENST00000284770 ANKRD63C9JTQ0 380 aa20.7■□□□□ 0.9
PDLIM3-202ENST00000284770 ACKR2O00590 384 aa20.7■□□□□ 0.9
PDLIM3-202ENST00000284770 CDC25BP30305 580 aa20.7■□□□□ 0.9
PDLIM3-202ENST00000284770 GJA8P48165 433 aa20.7■□□□□ 0.9
PDLIM3-202ENST00000284770 MNX1P50219 401 aaPredicted RBP20.7■□□□□ 0.9
PDLIM3-202ENST00000284770 SPAG1Q07617 926 aa20.7■□□□□ 0.9
PDLIM3-202ENST00000284770 FAM187BQ17R55 369 aa20.7■□□□□ 0.9
PDLIM3-202ENST00000284770 TCP11X2Q5H9J9 407 aa20.7■□□□□ 0.9
PDLIM3-202ENST00000284770 SLC39A4Q6P5W5 647 aa20.7■□□□□ 0.9
PDLIM3-202ENST00000284770 APTXQ7Z2E3 356 aaKnown RBP20.7■□□□□ 0.9
PDLIM3-202ENST00000284770 MRPL4Q9BYD3 311 aaKnown RBP20.7■□□□□ 0.9
PDLIM3-202ENST00000284770 GCOM2Q9BZD3 368 aaPredicted RBP20.7■□□□□ 0.9
PDLIM3-202ENST00000284770 XPO4Q9C0E2 1151 aaKnown RBP20.7■□□□□ 0.9
PDLIM3-202ENST00000284770 PRMT7Q9NVM4 692 aaPredicted RBP20.7■□□□□ 0.9
PDLIM3-202ENST00000284770 NOD1Q9Y239 953 aa20.7■□□□□ 0.9
PDLIM3-202ENST00000284770 SIP14410 1827 aa20.7■□□□□ 0.9
PDLIM3-202ENST00000284770 KCNJ18B7U540 433 aa20.69■□□□□ 0.9
PDLIM3-202ENST00000284770 EDN1P05305 212 aa20.69■□□□□ 0.9
PDLIM3-202ENST00000284770 IQCF3P0C7M6 154 aa20.69■□□□□ 0.9
PDLIM3-202ENST00000284770 EEF1GP26641 437 aaKnown RBP20.69■□□□□ 0.9
PDLIM3-202ENST00000284770 ADSSP30520 456 aa20.69■□□□□ 0.9
PDLIM3-202ENST00000284770 LIG4P49917 911 aa20.69■□□□□ 0.9
PDLIM3-202ENST00000284770 CDK7P50613 346 aa20.69■□□□□ 0.9
PDLIM3-202ENST00000284770 PTK7Q13308 1070 aa20.69■□□□□ 0.9
PDLIM3-202ENST00000284770 KCNJ12Q14500 433 aa20.69■□□□□ 0.9
PDLIM3-202ENST00000284770 ZPBP2Q6X784 338 aa20.69■□□□□ 0.9
PDLIM3-202ENST00000284770 WNT8BQ93098 351 aa20.69■□□□□ 0.9
PDLIM3-202ENST00000284770 TARS2Q9BW92 718 aaKnown RBP20.69■□□□□ 0.9
PDLIM3-202ENST00000284770 CDHR5Q9HBB8 845 aa20.69■□□□□ 0.9
PDLIM3-202ENST00000284770 MAGEC2Q9UBF1 373 aaPredicted RBP20.69■□□□□ 0.9
PDLIM3-202ENST00000284770 GINS2Q9Y248 185 aa20.69■□□□□ 0.9
PDLIM3-202ENST00000284770 CSDE1O75534 798 aaKnown RBP20.69■□□□□ 0.9
PDLIM3-202ENST00000284770 GNA14O95837 355 aa20.69■□□□□ 0.9
PDLIM3-202ENST00000284770 ARMCX5Q6P1M9 558 aa20.69■□□□□ 0.9
PDLIM3-202ENST00000284770 CNOT6LQ96LI5 555 aaKnown RBP20.69■□□□□ 0.9
PDLIM3-202ENST00000284770 PRIMPOLQ96LW4 560 aa20.69■□□□□ 0.9
PDLIM3-202ENST00000284770 CBWD1Q9BRT8 395 aa20.69■□□□□ 0.9
PDLIM3-202ENST00000284770 USP20Q9Y2K6 914 aa20.69■□□□□ 0.9
PDLIM3-202ENST00000284770 STYXL1Q9Y6J8 313 aa20.69■□□□□ 0.9
PDLIM3-202ENST00000284770 LRRC10BA6NIK2 292 aa20.68■□□□□ 0.9
PDLIM3-202ENST00000284770 B4GALT4O60513 344 aa20.68■□□□□ 0.9
PDLIM3-202ENST00000284770 SERPINC1P01008 464 aa20.68■□□□□ 0.9
PDLIM3-202ENST00000284770 DARSP14868 501 aaKnown RBP20.68■□□□□ 0.9
PDLIM3-202ENST00000284770 GARTP22102 1010 aa20.68■□□□□ 0.9
PDLIM3-202ENST00000284770 CRYBB1P53674 252 aaPredicted RBP20.68■□□□□ 0.9
PDLIM3-202ENST00000284770 MRPS6P82932 125 aaKnown RBP20.68■□□□□ 0.9
PDLIM3-202ENST00000284770 CREBRFQ8IUR6 639 aa20.68■□□□□ 0.9
PDLIM3-202ENST00000284770 ANKRD20A12PQ8NF67 263 aa20.68■□□□□ 0.9
PDLIM3-202ENST00000284770 NAP1L5Q96NT1 182 aaPredicted RBP20.68■□□□□ 0.9
PDLIM3-202ENST00000284770 OSMRQ99650 979 aa20.68■□□□□ 0.9
PDLIM3-202ENST00000284770 ACO2Q99798 780 aaKnown RBP20.68■□□□□ 0.9
PDLIM3-202ENST00000284770 CELF4Q9BZC1 486 aaKnown RBP20.68■□□□□ 0.9
PDLIM3-202ENST00000284770 SENP6Q9GZR1 1112 aaPredicted RBP20.68■□□□□ 0.9
PDLIM3-202ENST00000284770 MCOLN1Q9GZU1 580 aa20.68■□□□□ 0.9
PDLIM3-202ENST00000284770 TRPV6Q9H1D0 765 aa20.68■□□□□ 0.9
PDLIM3-202ENST00000284770 LIMA1Q9UHB6 759 aaKnown RBP20.68■□□□□ 0.9
PDLIM3-202ENST00000284770 TTLL13PA6NNM8 815 aa20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 M0QZ92 97 aa20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 AKAP3O75969 853 aa20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 EIF4BP23588 611 aaKnown RBP20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 CYP2J2P51589 502 aa20.67■□□□□ 0.9
PDLIM3-202ENST00000284770 UBASH3AP57075 661 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms