RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 SPDYE7PQ495Y7 208 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 ACCSLQ4AC99 568 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 TEX2Q8IWB9 1127 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 FAM133AQ8N9E0 248 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 OR6P1Q8NGX9 317 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 PANX2Q96RD6 677 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 ZMYND12Q9H0C1 365 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 MAN1C1Q9NR34 630 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 WARS2Q9UGM6 360 aaKnown RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 NRBP1Q9UHY1 535 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 UTYO14607 1347 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 SNTNA6NMZ2 147 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 SH2B2O14492 632 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 HOXC6P09630 235 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 JAK1P23458 1154 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 CHRNA3P32297 505 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 ATP1A2P50993 1020 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 GPC3P51654 580 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 ARHGEF7Q14155 803 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 DTX3LQ8TDB6 740 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 RMDN1Q96DB5 314 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 PLEKHA5Q9HAU0 1116 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 DBNLQ9UJU6 430 aaKnown RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 STK36Q9NRP7 1315 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 HEG1Q9ULI3 1381 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 PFDN1O60925 122 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 PLCG1P19174 1290 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 HLA-DPA1P20036 260 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 QARSP47897 775 aaKnown RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 RGS4P49798 205 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 SKP1P63208 163 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 KCNB1Q14721 858 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 CEP55Q53EZ4 464 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 IER5Q5VY09 327 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 EEPD1Q7L9B9 569 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 EXT2Q93063 718 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 FAF2Q96CS3 445 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 FRMD8Q9BZ67 464 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 SFMBT1Q9UHJ3 866 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 CLCA2Q9UQC9 943 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 SPAG6O75602 509 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 GGPS1O95749 300 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 ESRRAP11474 423 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 TCF3P15923 654 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 VCLP18206 1134 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 OSTNP61366 133 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 NSUN2Q08J23 767 aaKnown RBP eCLIP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 ZBTB41Q5SVQ8 909 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 MTHFD1LQ6UB35 978 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 GLB1LQ6UWU2 654 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 CCNYL1Q8N7R7 359 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 BANK1Q8NDB2 785 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 KLHL29Q96CT2 875 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 MMP19Q99542 508 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 LATS2Q9NRM7 1088 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 SPATS2LQ9NUQ6 558 aaKnown RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 TMEM51Q9NW97 253 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 COL15A1P39059 1388 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 SAMD9Q5K651 1589 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 USP17L15C9J2P7 530 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 USP17L13C9JLJ4 530 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 USP17L11C9JVI0 530 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 USP17L18D6R9N7 530 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 USP17L22D6RA61 530 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 USP17L17D6RBQ6 530 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 USP17L19D6RCP7 530 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 USP17L20D6RJB6 530 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 MAPK13O15264 365 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 STAG3L1P0CL83 205 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 ETFBP38117 255 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 EIF4A3P38919 411 aaKnown RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 HADHAP40939 763 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 IFNAR2P48551 515 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 USP17L24Q0WX57 530 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 NR5A1Q13285 461 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 GRAMD1BQ3KR37 738 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 CENPPQ6IPU0 288 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 ARHGAP18Q8N392 663 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 ATPAF2Q8N5M1 289 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 TNIP2Q8NFZ5 429 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 ALKBH8Q96BT7 664 aaKnown RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 CFAP36Q96G28 342 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 SLITRK1Q96PX8 696 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 POLR3FQ9H1D9 316 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 RUBCNLQ9H714 662 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 CASS4Q9NQ75 786 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 GINM1Q9NU53 330 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 SLC9A2Q9UBY0 812 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 ZC3H4Q9UPT8 1303 aaKnown RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 ANGPT2O15123 496 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 ECE2O60344 883 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 RNASEH1O60930 286 aaKnown RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 CDK8P49336 464 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 KCNQ4P56696 695 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 KIF23Q02241 960 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 KCNH2Q12809 1159 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 KRT72Q14CN4 511 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 NLRP10Q86W26 655 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms