RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 UBXN2AP68543 259 aa13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 MTHFSDQ2M296 383 aaKnown RBP13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 ZNF790Q6PG37 636 aa13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 ZBED8Q8IZ13 594 aa13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 BEST2Q8NFU1 509 aa13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 CALR3Q96L12 384 aaKnown RBP13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 SPRTNQ9H040 489 aaPredicted RBP13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 YTHDC2Q9H6S0 1430 aaKnown RBP13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 RGS5O15539 181 aa13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 CDC27P30260 824 aa13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 RSPH1Q8WYR4 309 aa13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 OSBPL1AQ9BXW6 950 aa13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 SOAT1P35610 550 aa13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 PSMC6P62333 389 aa13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 CDC37Q16543 378 aaPredicted RBP13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 ZNF544Q6NX49 715 aa13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 P3H2Q8IVL5 708 aa13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 PPM1NQ8N819 430 aa13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 TRIM63Q969Q1 353 aa13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 IMPAD1Q9NX62 359 aa13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 GRIN2BQ13224 1484 aa13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 SOX6P35712 828 aa13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 KCNV2Q8TDN2 545 aa13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 FAM162AQ96A26 154 aa13.98□□□□□ -0.17
SMARCA5-201ENST00000283131 KRR1Q13601 381 aaKnown RBP13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 EIF4A2Q14240 407 aaKnown RBP13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 SDE2Q6IQ49 451 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 ASAP3Q8TDY4 903 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 UNC45AQ9H3U1 944 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 AKAP10O43572 662 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 BCAMP50895 628 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 ATXN3P54252 364 aaPredicted RBP13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 BFARQ9NZS9 450 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 LMTK3Q96Q04 1460 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 PHLPP2Q6ZVD8 1323 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 DYRK3O43781 588 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 CALB1P05937 261 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 TYK2P29597 1187 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 ARFIP2P53365 341 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 ATP12AP54707 1039 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 ALDH6A1Q02252 535 aaKnown RBP13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 HIC1Q14526 733 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 SMAD5Q99717 465 aaKnown RBP13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 SGSM2O43147 1006 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 IREB2P48200 963 aaKnown RBP13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 PDAP1Q13442 181 aaKnown RBP13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 COBLL1Q53SF7 1204 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 SDR42E1Q8WUS8 393 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 CNKSR1Q969H4 720 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 UBE4BO95155 1302 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 BTDP43251 543 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 NDUFA5Q16718 116 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 ANKRD40Q6AI12 368 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 MRPL1Q9BYD6 325 aaKnown RBP13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 ZNF699Q32M78 642 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 MOSPD2Q8NHP6 518 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 MAP3K20Q9NYL2 800 aaKnown RBP13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 ADAM22Q9P0K1 906 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 NRBP1Q9UHY1 535 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 PCDHA13Q9Y5I0 950 aa13.97□□□□□ -0.17
SMARCA5-201ENST00000283131 RASGRF1Q13972 1273 aa13.96□□□□□ -0.17
SMARCA5-201ENST00000283131 EFHC2Q5JST6 749 aa13.96□□□□□ -0.17
SMARCA5-201ENST00000283131 MAP10Q9P2G4 905 aa13.96□□□□□ -0.17
SMARCA5-201ENST00000283131 MBD2Q9UBB5 411 aa13.96□□□□□ -0.17
SMARCA5-201ENST00000283131 KRT76Q01546 638 aa13.96□□□□□ -0.17
SMARCA5-201ENST00000283131 NME3Q13232 169 aa13.96□□□□□ -0.17
SMARCA5-201ENST00000283131 IFNL3Q8IZI9 196 aa13.96□□□□□ -0.17
SMARCA5-201ENST00000283131 DTNBP1Q96EV8 351 aa13.96□□□□□ -0.17
SMARCA5-201ENST00000283131 TNKSO95271 1327 aa13.96□□□□□ -0.17
SMARCA5-201ENST00000283131 AQRO60306 1485 aaKnown RBP eCLIP13.96□□□□□ -0.179e-7■■■■■ 27.1
SMARCA5-201ENST00000283131 NEK10Q6ZWH5 1172 aa13.96□□□□□ -0.17
SMARCA5-201ENST00000283131 GIMAP8Q8ND71 665 aaPredicted RBP13.96□□□□□ -0.17
SMARCA5-201ENST00000283131 ELMO2Q96JJ3 720 aa13.96□□□□□ -0.17
SMARCA5-201ENST00000283131 PKP3Q9Y446 797 aa13.96□□□□□ -0.17
SMARCA5-201ENST00000283131 ASXL1Q8IXJ9 1541 aa13.96□□□□□ -0.17
SMARCA5-201ENST00000283131 FLT3P36888 993 aa13.96□□□□□ -0.17
SMARCA5-201ENST00000283131 MTFR1Q15390 333 aa13.96□□□□□ -0.17
SMARCA5-201ENST00000283131 ERAP2Q6P179 960 aa13.96□□□□□ -0.17
SMARCA5-201ENST00000283131 DFFAO00273 331 aa13.96□□□□□ -0.17
SMARCA5-201ENST00000283131 SERPINB3P29508 390 aa13.96□□□□□ -0.17
SMARCA5-201ENST00000283131 AASDHQ4L235 1098 aaPredicted RBP13.96□□□□□ -0.17
SMARCA5-201ENST00000283131 MICU2Q8IYU8 434 aa13.96□□□□□ -0.17
SMARCA5-201ENST00000283131 SAC3D1A6NKF1 404 aa13.96□□□□□ -0.18
SMARCA5-201ENST00000283131 PSMC3P17980 439 aa13.96□□□□□ -0.18
SMARCA5-201ENST00000283131 CTSWP56202 376 aa13.96□□□□□ -0.18
SMARCA5-201ENST00000283131 PWP1Q13610 501 aa13.96□□□□□ -0.18
SMARCA5-201ENST00000283131 KIRREL3Q8IZU9 778 aa13.96□□□□□ -0.18
SMARCA5-201ENST00000283131 ERAP1Q9NZ08 941 aa13.96□□□□□ -0.18
SMARCA5-201ENST00000283131 CCDC188H7C350 402 aa13.96□□□□□ -0.18
SMARCA5-201ENST00000283131 RBL2Q08999 1139 aa13.96□□□□□ -0.18
SMARCA5-201ENST00000283131 TRIM48Q8IWZ4 208 aa13.96□□□□□ -0.18
SMARCA5-201ENST00000283131 TMEM35BQ8NCS4 154 aa13.96□□□□□ -0.18
SMARCA5-201ENST00000283131 VPS37AQ8NEZ2 397 aa13.96□□□□□ -0.18
SMARCA5-201ENST00000283131 AGR3Q8TD06 166 aa13.96□□□□□ -0.18
SMARCA5-201ENST00000283131 PDCD10Q9BUL8 212 aa13.96□□□□□ -0.18
SMARCA5-201ENST00000283131 SPATA2Q9UM82 520 aa13.96□□□□□ -0.18
SMARCA5-201ENST00000283131 AK9Q5TCS8 1911 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms