RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 DYRK4Q9NR20 520 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 C6orf203Q9P0P8 240 aaPredicted RBP9.24□□□□□ -0.93
NIPBL-201ENST00000282516 HOXC9P31274 260 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 GTF2IP78347 998 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 BFSP2Q13515 415 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 CUL3Q13618 768 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 FAM162AQ96A26 154 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 ADAM22Q9P0K1 906 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 LLGL1Q15334 1064 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 NUDT18Q6ZVK8 323 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 MTMR6Q9Y217 621 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 BIRC5O15392 142 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 HSPA13P48723 471 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 ADCK5Q3MIX3 580 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 GIMAP8Q8ND71 665 aaPredicted RBP9.24□□□□□ -0.93
NIPBL-201ENST00000282516 FLAD1Q8NFF5 587 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 WDR48Q8TAF3 677 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 USP44Q9H0E7 712 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 PSD3Q9NYI0 1048 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 PNMA3Q9UL41 463 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 FOXP2O15409 715 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 MAP3K13O43283 966 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 SDC4P31431 198 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 NUP93Q8N1F7 819 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 BRD8Q9H0E9 1235 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 CCDC134Q9H6E4 229 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 CLIC4Q9Y696 253 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 ZNF518AQ6AHZ1 1483 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 LMTK3Q96Q04 1460 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 TCP10L2B9ZVM9 353 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 AP3B1O00203 1094 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 IYDQ6PHW0 289 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 OR6P1Q8NGX9 317 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 FAM167BQ9BTA0 163 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 BBS2Q9BXC9 721 aa9.24□□□□□ -0.93
NIPBL-201ENST00000282516 GMNCA6NCL1 334 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 SEC24DO94855 1032 aaPredicted RBP9.23□□□□□ -0.93
NIPBL-201ENST00000282516 SEC24BO95487 1268 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 ZNF235Q14590 738 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 KRT78Q8N1N4 520 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 MRPL48Q96GC5 212 aaKnown RBP9.23□□□□□ -0.93
NIPBL-201ENST00000282516 SYBUQ9NX95 663 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 UTP6Q9NYH9 597 aaKnown RBP9.23□□□□□ -0.93
NIPBL-201ENST00000282516 A0A0D9SFI3 127 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 TARSL2A2RTX5 802 aaKnown RBP9.23□□□□□ -0.93
NIPBL-201ENST00000282516 TRIM16LQ309B1 348 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 PROM2Q8N271 834 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 EME1Q96AY2 570 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 PPP1R2P1Q96PQ5 205 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 AFF4Q9UHB7 1163 aaKnown RBP9.23□□□□□ -0.93
NIPBL-201ENST00000282516 HEY1Q9Y5J3 304 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 POTEFA5A3E0 1075 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 BTBD18B2RXH4 712 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 SLC30A9Q6PML9 568 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 PRUNE1Q86TP1 453 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 CMTR1Q8N1G2 835 aaKnown RBP9.23□□□□□ -0.93
NIPBL-201ENST00000282516 THOC1Q96FV9 657 aaKnown RBP9.23□□□□□ -0.93
NIPBL-201ENST00000282516 KANSL2Q9H9L4 492 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 POLIQ9UNA4 740 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 MFAP3LO75121 409 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 EIF2B5Q13144 721 aaKnown RBP9.23□□□□□ -0.93
NIPBL-201ENST00000282516 RASGRF1Q13972 1273 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 DNAL1Q4LDG9 190 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 CEP72Q9P209 647 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 ARHGAP31Q2M1Z3 1444 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 LDHAP00338 332 aaKnown RBP9.23□□□□□ -0.93
NIPBL-201ENST00000282516 PLCG1P19174 1290 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 SCNN1DP51172 638 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 SLC44A4Q53GD3 710 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 C6orf10Q5SRN2 563 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 NLRP14Q86W24 1093 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 PPM1NQ8N819 430 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 CABLES1Q8TDN4 633 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 INPP5DQ92835 1189 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 SH3GL1Q99961 368 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 SPTLC3Q9NUV7 552 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 ZFATQ9P243 1243 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 PALMO75781 387 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 NCKAP1LP55160 1127 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 RABGAP1LQ5R372 815 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 KRT77Q7Z794 578 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 PLB1Q6P1J6 1458 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 KIAA0232Q92628 1395 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 NEURL1BA8MQ27 555 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 GGPS1O95749 300 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 HMOX2P30519 316 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 ARL4DP49703 201 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 TMEM35BQ8NCS4 154 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 SIKE1Q9BRV8 207 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 ZSWIM6Q9HCJ5 1215 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 NDUFB9Q9Y6M9 179 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 CLIC2O15247 247 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 SNAP25P60880 206 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 DPCR1Q3MIW9 517 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 SYDE2Q5VT97 1194 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 ANKRD49Q8WVL7 239 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 EEF2KMTQ96G04 330 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 ABCB6Q9NP58 842 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 AP4S1Q9Y587 144 aa9.23□□□□□ -0.93
NIPBL-201ENST00000282516 KDM5DQ9BY66 1539 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms