RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 IQCA1LA6NCM1 817 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 RBAK-RBAKDNI3L0D1 243 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 GJA5P36382 358 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 ALCAMQ13740 583 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 NFIL3Q16649 462 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 XKR3Q5GH77 459 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 SLC39A4Q6P5W5 647 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 PALB2Q86YC2 1186 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 SLC9A9Q8IVB4 645 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 RDM1Q8NG50 284 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 ZBTB10Q96DT7 871 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 TLR10Q9BXR5 811 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 ANKFY1Q9P2R3 1169 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 EXOC7Q9UPT5 735 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 MYPNQ86TC9 1320 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 PTPRFP10586 1907 aa19.47■□□□□ 0.71
CAPN1-201ENST00000279247 LOXHD1Q8IVV2 1947 aa19.47■□□□□ 0.71
CAPN1-201ENST00000279247 CETN1Q12798 172 aa19.47■□□□□ 0.71
CAPN1-201ENST00000279247 C1orf220Q5T0J3 134 aa19.47■□□□□ 0.71
CAPN1-201ENST00000279247 DNERQ8NFT8 737 aa19.47■□□□□ 0.71
CAPN1-201ENST00000279247 COPS5Q92905 334 aa19.47■□□□□ 0.71
CAPN1-201ENST00000279247 IWS1Q96ST2 819 aa19.47■□□□□ 0.71
CAPN1-201ENST00000279247 TMEM117Q9H0C3 514 aa19.47■□□□□ 0.71
CAPN1-201ENST00000279247 FBXO40Q9UH90 709 aa19.47■□□□□ 0.71
CAPN1-201ENST00000279247 SYNGAP1Q96PV0 1343 aa19.47■□□□□ 0.71
CAPN1-201ENST00000279247 MCM3APO60318 1980 aa19.47■□□□□ 0.71
CAPN1-201ENST00000279247 ANO9A1A5B4 782 aa19.47■□□□□ 0.71
CAPN1-201ENST00000279247 GTPBP10A4D1E9 387 aaKnown RBP19.47■□□□□ 0.71
CAPN1-201ENST00000279247 PJA2O43164 708 aa19.47■□□□□ 0.71
CAPN1-201ENST00000279247 ARIH2O95376 493 aa19.47■□□□□ 0.71
CAPN1-201ENST00000279247 DRP2Q13474 957 aa19.47■□□□□ 0.71
CAPN1-201ENST00000279247 GSPT2Q8IYD1 628 aaKnown RBP19.47■□□□□ 0.71
CAPN1-201ENST00000279247 SLC20A1Q8WUM9 679 aa19.47■□□□□ 0.71
CAPN1-201ENST00000279247 SENP7Q9BQF6 1050 aa19.47■□□□□ 0.71
CAPN1-201ENST00000279247 PI4K2AQ9BTU6 479 aa19.47■□□□□ 0.71
CAPN1-201ENST00000279247 STK33Q9BYT3 514 aa19.47■□□□□ 0.71
CAPN1-201ENST00000279247 RBPJLQ9UBG7 517 aa19.47■□□□□ 0.71
CAPN1-201ENST00000279247 SPDYE5A6NIY4 337 aa19.46■□□□□ 0.71
CAPN1-201ENST00000279247 OATP04181 439 aa19.46■□□□□ 0.71
CAPN1-201ENST00000279247 TCF7P36402 384 aaPredicted RBP19.46■□□□□ 0.71
CAPN1-201ENST00000279247 ACOT2P49753 483 aa19.46■□□□□ 0.71
CAPN1-201ENST00000279247 NAB2Q15742 525 aa19.46■□□□□ 0.71
CAPN1-201ENST00000279247 MCPH1Q8NEM0 835 aa19.46■□□□□ 0.71
CAPN1-201ENST00000279247 LNX1Q8TBB1 728 aaPredicted RBP19.46■□□□□ 0.71
CAPN1-201ENST00000279247 ZBTB45Q96K62 511 aaPredicted RBP19.46■□□□□ 0.71
CAPN1-201ENST00000279247 EFCC1Q9HA90 598 aa19.46■□□□□ 0.71
CAPN1-201ENST00000279247 TAS2R14Q9NYV8 317 aa19.46■□□□□ 0.71
CAPN1-201ENST00000279247 OGFRQ9NZT2 677 aa19.46■□□□□ 0.71
CAPN1-201ENST00000279247 NFASCO94856 1347 aa19.46■□□□□ 0.71
CAPN1-201ENST00000279247 DKC1O60832 514 aaKnown RBP eCLIP19.46■□□□□ 0.71
CAPN1-201ENST00000279247 SASH3O75995 380 aa19.46■□□□□ 0.71
CAPN1-201ENST00000279247 CALCAP01258 141 aa19.46■□□□□ 0.71
CAPN1-201ENST00000279247 MAPTP10636 758 aaKnown RBP19.46■□□□□ 0.71
CAPN1-201ENST00000279247 FERP16591 822 aa19.46■□□□□ 0.71
CAPN1-201ENST00000279247 MAP4K3Q8IVH8 894 aa19.46■□□□□ 0.71
CAPN1-201ENST00000279247 ASAP3Q8TDY4 903 aa19.46■□□□□ 0.71
CAPN1-201ENST00000279247 SLC7A3Q8WY07 619 aa19.46■□□□□ 0.71
CAPN1-201ENST00000279247 FARP2O94887 1054 aaPredicted RBP19.46■□□□□ 0.71
CAPN1-201ENST00000279247 LIG4P49917 911 aa19.46■□□□□ 0.71
CAPN1-201ENST00000279247 KCTD2Q14681 263 aa19.46■□□□□ 0.71
CAPN1-201ENST00000279247 HSDL1Q3SXM5 330 aa19.46■□□□□ 0.71
CAPN1-201ENST00000279247 GJC2Q5T442 439 aaPredicted RBP19.46■□□□□ 0.71
CAPN1-201ENST00000279247 ZC3H15Q8WU90 426 aaKnown RBP19.46■□□□□ 0.71
CAPN1-201ENST00000279247 ABCB6Q9NP58 842 aa19.46■□□□□ 0.71
CAPN1-201ENST00000279247 AGTPBP1Q9UPW5 1226 aa19.46■□□□□ 0.71
CAPN1-201ENST00000279247 BZW2Q9Y6E2 419 aaKnown RBP19.46■□□□□ 0.71
CAPN1-201ENST00000279247 LCTP09848 1927 aa19.46■□□□□ 0.71
CAPN1-201ENST00000279247 OTOFQ9HC10 1997 aa19.45■□□□□ 0.7
CAPN1-201ENST00000279247 WDR90Q96KV7 1748 aa19.45■□□□□ 0.7
CAPN1-201ENST00000279247 GSTTP1A0A1W2PQM5 241 aa19.45■□□□□ 0.7
CAPN1-201ENST00000279247 CNMDO75829 334 aa19.45■□□□□ 0.7
CAPN1-201ENST00000279247 BMS1Q14692 1282 aaKnown RBP19.45■□□□□ 0.7
CAPN1-201ENST00000279247 CREG2Q8IUH2 290 aa19.45■□□□□ 0.7
CAPN1-201ENST00000279247 TXLNBQ8N3L3 684 aa19.45■□□□□ 0.7
CAPN1-201ENST00000279247 PROCA1Q8NCQ7 364 aaPredicted RBP19.45■□□□□ 0.7
CAPN1-201ENST00000279247 SEMA4DQ92854 862 aa19.45■□□□□ 0.7
CAPN1-201ENST00000279247 GPR88Q9GZN0 384 aa19.45■□□□□ 0.7
CAPN1-201ENST00000279247 NOP56O00567 594 aaKnown RBP19.45■□□□□ 0.7
CAPN1-201ENST00000279247 H2AFZP0C0S5 128 aa19.45■□□□□ 0.7
CAPN1-201ENST00000279247 STAT5BP51692 787 aa19.45■□□□□ 0.7
CAPN1-201ENST00000279247 SLC7A5Q01650 507 aa19.45■□□□□ 0.7
CAPN1-201ENST00000279247 CKAP4Q07065 602 aaKnown RBP19.45■□□□□ 0.7
CAPN1-201ENST00000279247 LONRF2Q1L5Z9 754 aa19.45■□□□□ 0.7
CAPN1-201ENST00000279247 H2AFVQ71UI9 128 aa19.45■□□□□ 0.7
CAPN1-201ENST00000279247 TAS1R3Q7RTX0 852 aa19.45■□□□□ 0.7
CAPN1-201ENST00000279247 LMO3Q8TAP4 145 aa19.45■□□□□ 0.7
CAPN1-201ENST00000279247 TIPINQ9BVW5 301 aa19.45■□□□□ 0.7
CAPN1-201ENST00000279247 PORCNQ9H237 461 aa19.45■□□□□ 0.7
CAPN1-201ENST00000279247 GRID2IPA4D2P6 1211 aa19.44■□□□□ 0.7
CAPN1-201ENST00000279247 STAM2O75886 525 aa19.44■□□□□ 0.7
CAPN1-201ENST00000279247 TNFAIP3P21580 790 aa19.44■□□□□ 0.7
CAPN1-201ENST00000279247 LRRC71Q8N4P6 559 aa19.44■□□□□ 0.7
CAPN1-201ENST00000279247 DEPTORQ8TB45 409 aa19.44■□□□□ 0.7
CAPN1-201ENST00000279247 TAS1R2Q8TE23 839 aa19.44■□□□□ 0.7
CAPN1-201ENST00000279247 SLC10A4Q96EP9 437 aa19.44■□□□□ 0.7
CAPN1-201ENST00000279247 MMP19Q99542 508 aa19.44■□□□□ 0.7
CAPN1-201ENST00000279247 OSGEPQ9NPF4 335 aa19.44■□□□□ 0.7
CAPN1-201ENST00000279247 LRRIQ3A6PVS8 624 aaPredicted RBP19.44■□□□□ 0.7
CAPN1-201ENST00000279247 TRAPPC12Q8WVT3 735 aa19.44■□□□□ 0.7
CAPN1-201ENST00000279247 PCYT2Q99447 389 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms