RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 ZNF131P52739 623 aa15.67■□□□□ 0.1
CNOT9-201ENST00000273064 ORC2Q13416 577 aaPredicted RBP15.67■□□□□ 0.1
CNOT9-201ENST00000273064 NAB2Q15742 525 aa15.67■□□□□ 0.1
CNOT9-201ENST00000273064 EDRF1Q3B7T1 1238 aa15.67■□□□□ 0.1
CNOT9-201ENST00000273064 KRT39Q6A163 491 aa15.67■□□□□ 0.1
CNOT9-201ENST00000273064 FOXR1Q6PIV2 292 aa15.67■□□□□ 0.1
CNOT9-201ENST00000273064 LRRC71Q8N4P6 559 aa15.67■□□□□ 0.1
CNOT9-201ENST00000273064 LBHD1Q9BQE6 289 aaPredicted RBP15.67■□□□□ 0.1
CNOT9-201ENST00000273064 FAM114A2Q9NRY5 505 aa15.67■□□□□ 0.1
CNOT9-201ENST00000273064 PPFIA4O75335 1185 aa15.67■□□□□ 0.1
CNOT9-201ENST00000273064 CCDC137Q6PK04 289 aaKnown RBP15.67■□□□□ 0.1
CNOT9-201ENST00000273064 TAOK1Q7L7X3 1001 aa15.67■□□□□ 0.1
CNOT9-201ENST00000273064 PALM2Q8IXS6 379 aa15.67■□□□□ 0.1
CNOT9-201ENST00000273064 MXRA8Q9BRK3 442 aa15.67■□□□□ 0.1
CNOT9-201ENST00000273064 TLR10Q9BXR5 811 aa15.67■□□□□ 0.1
CNOT9-201ENST00000273064 TBC1D22BQ9NU19 505 aa15.67■□□□□ 0.1
CNOT9-201ENST00000273064 MAD1L1Q9Y6D9 718 aa15.67■□□□□ 0.1
CNOT9-201ENST00000273064 FAM169AQ9Y6X4 670 aa15.67■□□□□ 0.1
CNOT9-201ENST00000273064 H7C0C1 242 aa15.66■□□□□ 0.1
CNOT9-201ENST00000273064 MEIS2O14770 477 aa15.66■□□□□ 0.1
CNOT9-201ENST00000273064 FAM153BP0C7A2 387 aa15.66■□□□□ 0.1
CNOT9-201ENST00000273064 ATP5OP48047 213 aa15.66■□□□□ 0.1
CNOT9-201ENST00000273064 BASP1P80723 227 aaKnown RBP15.66■□□□□ 0.1
CNOT9-201ENST00000273064 ORC1Q13415 861 aa15.66■□□□□ 0.1
CNOT9-201ENST00000273064 TRADDQ15628 312 aa15.66■□□□□ 0.1
CNOT9-201ENST00000273064 FAM153CQ494X1 144 aa15.66■□□□□ 0.1
CNOT9-201ENST00000273064 DNAJC24Q6P3W2 148 aa15.66■□□□□ 0.1
CNOT9-201ENST00000273064 ZNF507Q8TCN5 953 aa15.66■□□□□ 0.1
CNOT9-201ENST00000273064 WHAMMQ8TF30 809 aa15.66■□□□□ 0.1
CNOT9-201ENST00000273064 TARS2Q9BW92 718 aaKnown RBP15.66■□□□□ 0.1
CNOT9-201ENST00000273064 FAM153AQ9UHL3 310 aa15.66■□□□□ 0.1
CNOT9-201ENST00000273064 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.66■□□□□ 0.1
CNOT9-201ENST00000273064 SPDYE2BA6NHP3 402 aa15.66■□□□□ 0.1
CNOT9-201ENST00000273064 STAM2O75886 525 aa15.66■□□□□ 0.1
CNOT9-201ENST00000273064 SPDYE6P0CI01 402 aa15.66■□□□□ 0.1
CNOT9-201ENST00000273064 CNGA1P29973 690 aa15.66■□□□□ 0.1
CNOT9-201ENST00000273064 GMPSP49915 693 aaPredicted RBP15.66■□□□□ 0.1
CNOT9-201ENST00000273064 R3HDM1Q15032 1099 aaKnown RBP15.66■□□□□ 0.1
CNOT9-201ENST00000273064 FBXL13Q8NEE6 735 aa15.66■□□□□ 0.1
CNOT9-201ENST00000273064 NGRNQ9NPE2 291 aaKnown RBP15.66■□□□□ 0.1
CNOT9-201ENST00000273064 SLITRK3O94933 977 aa15.66■□□□□ 0.1
CNOT9-201ENST00000273064 NT5C2P49902 561 aa15.66■□□□□ 0.1
CNOT9-201ENST00000273064 BBS9Q3SYG4 887 aa15.66■□□□□ 0.1
CNOT9-201ENST00000273064 RNF34Q969K3 372 aa15.66■□□□□ 0.1
CNOT9-201ENST00000273064 DNAJC19Q96DA6 116 aa15.66■□□□□ 0.1
CNOT9-201ENST00000273064 ZRANB2O95218 330 aaKnown RBP eCLIP15.65■□□□□ 0.1
CNOT9-201ENST00000273064 SREBF1P36956 1147 aa15.65■□□□□ 0.1
CNOT9-201ENST00000273064 IRX4P78413 519 aa15.65■□□□□ 0.1
CNOT9-201ENST00000273064 ALS2CLQ60I27 953 aa15.65■□□□□ 0.1
CNOT9-201ENST00000273064 MSANTD4Q8NCY6 345 aa15.65■□□□□ 0.1
CNOT9-201ENST00000273064 MDM1Q8TC05 714 aa15.65■□□□□ 0.1
CNOT9-201ENST00000273064 TXNDC16Q9P2K2 825 aa15.65■□□□□ 0.1
CNOT9-201ENST00000273064 RNF8O76064 485 aa15.65■□□□□ 0.1
CNOT9-201ENST00000273064 COMTP21964 271 aa15.65■□□□□ 0.1
CNOT9-201ENST00000273064 SCP2P22307 547 aa15.65■□□□□ 0.1
CNOT9-201ENST00000273064 SMARCA1P28370 1054 aa15.65■□□□□ 0.1
CNOT9-201ENST00000273064 KCNMA1Q12791 1236 aa15.65■□□□□ 0.1
CNOT9-201ENST00000273064 SRRM1Q8IYB3 904 aaKnown RBP15.65■□□□□ 0.1
CNOT9-201ENST00000273064 ATG4AQ8WYN0 398 aa15.65■□□□□ 0.1
CNOT9-201ENST00000273064 C9orf72Q96LT7 481 aa15.65■□□□□ 0.1
CNOT9-201ENST00000273064 STK33Q9BYT3 514 aa15.65■□□□□ 0.1
CNOT9-201ENST00000273064 MYOZ2Q9NPC6 264 aa15.65■□□□□ 0.1
CNOT9-201ENST00000273064 PEX10O60683 326 aa15.65■□□□□ 0.1
CNOT9-201ENST00000273064 SGPL1O95470 568 aa15.65■□□□□ 0.1
CNOT9-201ENST00000273064 CAP2P40123 477 aa15.65■□□□□ 0.1
CNOT9-201ENST00000273064 YWHAGP61981 247 aaKnown RBP eCLIP15.65■□□□□ 0.1
CNOT9-201ENST00000273064 SLC15A2Q16348 729 aa15.65■□□□□ 0.1
CNOT9-201ENST00000273064 AADACL2Q6P093 401 aa15.65■□□□□ 0.1
CNOT9-201ENST00000273064 DPP9Q86TI2 863 aa15.65■□□□□ 0.1
CNOT9-201ENST00000273064 RHOT2Q8IXI1 618 aa15.65■□□□□ 0.1
CNOT9-201ENST00000273064 FAM163AQ96GL9 167 aaPredicted RBP15.65■□□□□ 0.1
CNOT9-201ENST00000273064 HOMER3Q9NSC5 361 aa15.65■□□□□ 0.1
CNOT9-201ENST00000273064 RBAKQ9NYW8 714 aaPredicted RBP15.65■□□□□ 0.1
CNOT9-201ENST00000273064 FEZ2Q9UHY8 353 aaPredicted RBP15.65■□□□□ 0.1
CNOT9-201ENST00000273064 DBR1Q9UK59 544 aaKnown RBP15.65■□□□□ 0.1
CNOT9-201ENST00000273064 SAT1P21673 171 aa15.64■□□□□ 0.09
CNOT9-201ENST00000273064 SETDB1Q15047 1291 aa15.64■□□□□ 0.09
CNOT9-201ENST00000273064 STXBP2Q15833 593 aa15.64■□□□□ 0.09
CNOT9-201ENST00000273064 PPP6R3Q5H9R7 873 aaPredicted RBP15.64■□□□□ 0.09
CNOT9-201ENST00000273064 RNF149Q8NC42 400 aa15.64■□□□□ 0.09
CNOT9-201ENST00000273064 HSPH1Q92598 858 aa15.64■□□□□ 0.09
CNOT9-201ENST00000273064 TUFT1Q9NNX1 390 aa15.64■□□□□ 0.09
CNOT9-201ENST00000273064 SEPT10Q9P0V9 454 aa15.64■□□□□ 0.09
CNOT9-201ENST00000273064 ZNF263O14978 683 aa15.64■□□□□ 0.09
CNOT9-201ENST00000273064 MYCP01106 439 aaPredicted RBP15.64■□□□□ 0.09
CNOT9-201ENST00000273064 ERFP50548 548 aa15.64■□□□□ 0.09
CNOT9-201ENST00000273064 KRT76Q01546 638 aa15.64■□□□□ 0.09
CNOT9-201ENST00000273064 NUGGCQ68CJ6 796 aa15.64■□□□□ 0.09
CNOT9-201ENST00000273064 SPOPLQ6IQ16 392 aa15.64■□□□□ 0.09
CNOT9-201ENST00000273064 CASKIN2Q8WXE0 1202 aa15.64■□□□□ 0.09
CNOT9-201ENST00000273064 GGA3Q9NZ52 723 aa15.64■□□□□ 0.09
CNOT9-201ENST00000273064 AGO2Q9UKV8 859 aaKnown RBP15.64■□□□□ 0.09
CNOT9-201ENST00000273064 GOLGA4Q13439 2230 aaKnown RBP15.64■□□□□ 0.09
CNOT9-201ENST00000273064 ATRNO75882 1429 aa15.64■□□□□ 0.09
CNOT9-201ENST00000273064 MAP3K6O95382 1288 aa15.64■□□□□ 0.09
CNOT9-201ENST00000273064 WEE2P0C1S8 567 aa15.64■□□□□ 0.09
CNOT9-201ENST00000273064 KRT81Q14533 505 aa15.64■□□□□ 0.09
CNOT9-201ENST00000273064 SPATA31A6Q5VVP1 1343 aa15.64■□□□□ 0.09
CNOT9-201ENST00000273064 LRRC55Q6ZSA7 311 aa15.64■□□□□ 0.09
CNOT9-201ENST00000273064 RFX6Q8HWS3 928 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms