RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 TMEM143Q96AN5 459 aa18.08■□□□□ 0.49
CCDC40-201ENST00000269318 SAAL1Q96ER3 474 aa18.08■□□□□ 0.49
CCDC40-201ENST00000269318 ZNF408Q9H9D4 720 aa18.08■□□□□ 0.49
CCDC40-201ENST00000269318 LUC7LQ9NQ29 371 aaKnown RBP18.08■□□□□ 0.49
CCDC40-201ENST00000269318 SAR1BQ9Y6B6 198 aa18.08■□□□□ 0.49
CCDC40-201ENST00000269318 RFX1P22670 979 aa18.08■□□□□ 0.48
CCDC40-201ENST00000269318 GLRA2P23416 452 aa18.08■□□□□ 0.48
CCDC40-201ENST00000269318 DRAP1Q14919 205 aaPredicted RBP18.08■□□□□ 0.48
CCDC40-201ENST00000269318 CELF3Q5SZQ8 465 aaKnown RBP18.08■□□□□ 0.48
CCDC40-201ENST00000269318 CCDC62Q6P9F0 684 aa18.08■□□□□ 0.48
CCDC40-201ENST00000269318 ANKRD13CQ8N6S4 541 aa18.08■□□□□ 0.48
CCDC40-201ENST00000269318 OLIG1Q8TAK6 271 aa18.08■□□□□ 0.48
CCDC40-201ENST00000269318 RABGGTAQ92696 567 aa18.08■□□□□ 0.48
CCDC40-201ENST00000269318 GPR20Q99678 358 aa18.08■□□□□ 0.48
CCDC40-201ENST00000269318 TMEM117Q9H0C3 514 aa18.08■□□□□ 0.48
CCDC40-201ENST00000269318 EFCC1Q9HA90 598 aa18.08■□□□□ 0.48
CCDC40-201ENST00000269318 PUF60Q9UHX1 559 aaKnown RBP18.08■□□□□ 0.48
CCDC40-201ENST00000269318 USP20Q9Y2K6 914 aa18.08■□□□□ 0.48
CCDC40-201ENST00000269318 SLC45A1Q9Y2W3 748 aa18.08■□□□□ 0.48
CCDC40-201ENST00000269318 JRKLQ9Y4A0 524 aa18.08■□□□□ 0.48
CCDC40-201ENST00000269318 GARTP22102 1010 aa18.07■□□□□ 0.48
CCDC40-201ENST00000269318 RFC5P40937 340 aa18.07■□□□□ 0.48
CCDC40-201ENST00000269318 C10orf76Q5T2E6 689 aa18.07■□□□□ 0.48
CCDC40-201ENST00000269318 SLC7A3Q8WY07 619 aa18.07■□□□□ 0.48
CCDC40-201ENST00000269318 MFSD14AQ96MC6 490 aa18.07■□□□□ 0.48
CCDC40-201ENST00000269318 NRBP2Q9NSY0 501 aa18.07■□□□□ 0.48
CCDC40-201ENST00000269318 SIP14410 1827 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 HNRNPDLO14979 420 aaKnown RBP18.06■□□□□ 0.48
CCDC40-201ENST00000269318 EVI5O60447 810 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 LGR5O75473 907 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 GFPT2O94808 682 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 CETPP11597 493 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 SCP2P22307 547 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 NAMPTP43490 491 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 CETN1Q12798 172 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 NAB2Q15742 525 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 HSDL1Q3SXM5 330 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 TEX35Q5T0J7 233 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 WDR78Q5VTH9 848 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 FBXO16Q8IX29 292 aaPredicted RBP18.06■□□□□ 0.48
CCDC40-201ENST00000269318 PARD3BQ8TEW8 1205 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 POMGNT1Q8WZA1 660 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 PACSIN1Q9BY11 444 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 NAGPAQ9UK23 515 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 ATP8B3O60423 1300 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 PDHXO00330 501 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 LRRN2O75325 713 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 ZSCAN20P17040 1043 aaPredicted RBP18.06■□□□□ 0.48
CCDC40-201ENST00000269318 KLRC1P26715 233 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 MXI1P50539 228 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 ENPEPQ07075 957 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 HSP90AA2PQ14568 343 aaPredicted RBP18.06■□□□□ 0.48
CCDC40-201ENST00000269318 GPR161Q8N6U8 529 aaKnown RBP18.06■□□□□ 0.48
CCDC40-201ENST00000269318 GPRC5AQ8NFJ5 357 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 TMC2Q8TDI7 906 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 NOX5Q96PH1 765 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 ALS2CR12Q96Q35 445 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 SYT11Q9BT88 431 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 EPC1Q9H2F5 836 aa18.06■□□□□ 0.48
CCDC40-201ENST00000269318 ZNFX1Q9P2E3 1918 aaKnown RBP18.05■□□□□ 0.48
CCDC40-201ENST00000269318 BTNL10A8MVZ5 291 aa18.05■□□□□ 0.48
CCDC40-201ENST00000269318 BTBD19C9JJ37 291 aa18.05■□□□□ 0.48
CCDC40-201ENST00000269318 SRGAP2O75044 1071 aa18.05■□□□□ 0.48
CCDC40-201ENST00000269318 CYP24A1Q07973 514 aa18.05■□□□□ 0.48
CCDC40-201ENST00000269318 KIAA0753Q2KHM9 967 aa18.05■□□□□ 0.48
CCDC40-201ENST00000269318 FMNL3Q8IVF7 1028 aa18.05■□□□□ 0.48
CCDC40-201ENST00000269318 FAM167AQ96KS9 214 aa18.05■□□□□ 0.48
CCDC40-201ENST00000269318 PPME1Q9Y570 386 aa18.05■□□□□ 0.48
CCDC40-201ENST00000269318 STYXL1Q9Y6J8 313 aa18.05■□□□□ 0.48
CCDC40-201ENST00000269318 LRRIQ3A6PVS8 624 aaPredicted RBP18.04■□□□□ 0.48
CCDC40-201ENST00000269318 DDX3XO00571 662 aaKnown RBP eCLIP18.04■□□□□ 0.48
CCDC40-201ENST00000269318 MAFO75444 373 aaPredicted RBP18.04■□□□□ 0.48
CCDC40-201ENST00000269318 PIGRP01833 764 aa18.04■□□□□ 0.48
CCDC40-201ENST00000269318 GTF2A2P52657 109 aa18.04■□□□□ 0.48
CCDC40-201ENST00000269318 FKBP1BP68106 108 aa18.04■□□□□ 0.48
CCDC40-201ENST00000269318 BMS1Q14692 1282 aaKnown RBP18.04■□□□□ 0.48
CCDC40-201ENST00000269318 ARHGEF19Q8IW93 802 aa18.04■□□□□ 0.48
CCDC40-201ENST00000269318 GPD1LQ8N335 351 aa18.04■□□□□ 0.48
CCDC40-201ENST00000269318 SLC30A5Q8TAD4 765 aa18.04■□□□□ 0.48
CCDC40-201ENST00000269318 BRI3BPQ8WY22 251 aa18.04■□□□□ 0.48
CCDC40-201ENST00000269318 AZI2Q9H6S1 392 aa18.04■□□□□ 0.48
CCDC40-201ENST00000269318 SNX12Q9UMY4 172 aa18.04■□□□□ 0.48
CCDC40-201ENST00000269318 COQ4Q9Y3A0 265 aa18.04■□□□□ 0.48
CCDC40-201ENST00000269318 CCL15-CCL14A0A0B4J2E2 113 aa18.04■□□□□ 0.48
CCDC40-201ENST00000269318 CTAGE15A4D2H0 777 aa18.04■□□□□ 0.48
CCDC40-201ENST00000269318 BUB1O43683 1085 aa18.04■□□□□ 0.48
CCDC40-201ENST00000269318 CTAGE8P0CG41 777 aa18.04■□□□□ 0.48
CCDC40-201ENST00000269318 TUBB4BP68371 445 aa18.04■□□□□ 0.48
CCDC40-201ENST00000269318 CCL15Q16663 113 aa18.04■□□□□ 0.48
CCDC40-201ENST00000269318 ALKBH5Q6P6C2 394 aaKnown RBP18.04■□□□□ 0.48
CCDC40-201ENST00000269318 PLPPR4Q7Z2D5 763 aa18.04■□□□□ 0.48
CCDC40-201ENST00000269318 CTAGE6Q86UF2 777 aa18.04■□□□□ 0.48
CCDC40-201ENST00000269318 CTAGE4Q8IX94 777 aa18.04■□□□□ 0.48
CCDC40-201ENST00000269318 BBXQ8WY36 941 aaPredicted RBP18.04■□□□□ 0.48
CCDC40-201ENST00000269318 CCDC127Q96BQ5 260 aa18.04■□□□□ 0.48
CCDC40-201ENST00000269318 BICD1Q96G01 975 aa18.04■□□□□ 0.48
CCDC40-201ENST00000269318 TMEM8AQ9HCN3 771 aa18.04■□□□□ 0.48
CCDC40-201ENST00000269318 MCM3APO60318 1980 aa18.03■□□□□ 0.48
CCDC40-201ENST00000269318 ASB14A6NK59 587 aa18.03■□□□□ 0.48
CCDC40-201ENST00000269318 ZBTB42B2RXF5 422 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms