RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 RGL1Q9NZL6 768 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 ZMYND8Q9ULU4 1186 aaPredicted RBP11.82□□□□□ -0.52
CHFR-201ENST00000266880 WDR7Q9Y4E6 1490 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 ZFP42Q96MM3 310 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 MRPL11Q9Y3B7 192 aaKnown RBP11.82□□□□□ -0.52
CHFR-201ENST00000266880 RGS5O15539 181 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 STX3Q13277 289 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 TFDP1Q14186 410 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 NGRNQ9NPE2 291 aaKnown RBP11.82□□□□□ -0.52
CHFR-201ENST00000266880 IQGAP2Q13576 1575 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 E5RI56 91 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 CHN1P15882 459 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 MXI1P50539 228 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 TTC30AQ86WT1 665 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 ZNF786Q8N393 782 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 ZNF556Q9HAH1 456 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 GPBP1L1Q9HC44 474 aaPredicted RBP11.82□□□□□ -0.52
CHFR-201ENST00000266880 PAPOLBQ9NRJ5 636 aaKnown RBP11.82□□□□□ -0.52
CHFR-201ENST00000266880 PHF20L1A8MW92 1017 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 ATP1A4Q13733 1029 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 C1orf228Q6PIY5 440 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 MRPL1Q9BYD6 325 aaKnown RBP11.81□□□□□ -0.52
CHFR-201ENST00000266880 ERBB4Q15303 1308 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 CROCCQ5TZA2 2017 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 PLCG1P19174 1290 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 PPARGP37231 505 aaPredicted RBP11.81□□□□□ -0.52
CHFR-201ENST00000266880 HSPA9P38646 679 aaKnown RBP11.81□□□□□ -0.52
CHFR-201ENST00000266880 COG2Q14746 738 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 SH2D3CQ8N5H7 860 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 ANKRD49Q8WVL7 239 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 BRIP1Q9BX63 1249 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 ZSWIM6Q9HCJ5 1215 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 USP40Q9NVE5 1235 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 PDP2Q9P2J9 529 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 PRDM4Q9UKN5 801 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 PARD3Q8TEW0 1356 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 E2F8A0AVK6 867 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 TTC33Q6PID6 262 aaPredicted RBP11.81□□□□□ -0.52
CHFR-201ENST00000266880 GLMNQ92990 594 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 KRT16P08779 473 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 ANXA13P27216 316 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 OSTNP61366 133 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 SNF8Q96H20 258 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 DEPDC7Q96QD5 511 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 CCT8L2Q96SF2 557 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 THTPAQ9BU02 230 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 CCDC134Q9H6E4 229 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 POLD4Q9HCU8 107 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 SLC40A1Q9NP59 571 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 PDZK1P1A8MUH7 402 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 ASNA1O43681 348 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 ANKMY2Q8IV38 441 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 FAM129AQ9BZQ8 928 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 MOSPD1Q9UJG1 213 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 UBXN2AP68543 259 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 BNIPLQ7Z465 357 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 IFNEQ86WN2 208 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 ITFG2Q969R8 447 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 PAGE5Q96GU1 130 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 FAM32AQ9Y421 112 aaKnown RBP11.81□□□□□ -0.52
CHFR-201ENST00000266880 MAST3O60307 1309 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 SMNDC1O75940 238 aaKnown RBP eCLIP11.81□□□□□ -0.52
CHFR-201ENST00000266880 CAPZA2P47755 286 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 CYLDQ9NQC7 956 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 UBN2Q6ZU65 1347 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 APLFQ8IW19 511 aaPredicted RBP11.81□□□□□ -0.52
CHFR-201ENST00000266880 PNMA1Q8ND90 353 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 RAD21L1Q9H4I0 556 aa11.81□□□□□ -0.52
CHFR-201ENST00000266880 EML4Q9HC35 981 aaKnown RBP11.81□□□□□ -0.52
CHFR-201ENST00000266880 AP3B1O00203 1094 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 DNALI1O14645 258 aaPredicted RBP11.8□□□□□ -0.52
CHFR-201ENST00000266880 SNPHO15079 494 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 RASSF9O75901 435 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 CDC27P30260 824 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 PPP1R2P3Q6NXS1 205 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 C16orf89Q6UX73 402 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 FHDC1Q9C0D6 1143 aaPredicted RBP11.8□□□□□ -0.52
CHFR-201ENST00000266880 C6orf10Q5SRN2 563 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 FBXO11Q86XK2 927 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 RTL3Q8N8U3 475 aaKnown RBP11.8□□□□□ -0.52
CHFR-201ENST00000266880 CHURC1Q8WUH1 139 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 SNAP25P60880 206 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 GALNT17Q6IS24 598 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 USP44Q9H0E7 712 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 CNTRLQ7Z7A1 2325 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 KLRF2D3W0D1 207 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 OTUD4Q01804 1114 aaKnown RBP11.8□□□□□ -0.52
CHFR-201ENST00000266880 SDR42E1Q8WUS8 393 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 CCDC24Q8N4L8 307 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 IFT43Q96FT9 208 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 MRPL39Q9NYK5 338 aaKnown RBP11.8□□□□□ -0.52
CHFR-201ENST00000266880 PODXLO00592 558 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 KRT26Q7Z3Y9 468 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 LRRC39Q96DD0 335 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 C20orf96Q9NUD7 363 aaPredicted RBP11.8□□□□□ -0.52
CHFR-201ENST00000266880 PCDHGA3Q9Y5H0 932 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 STMND1H3BQB6 276 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 P4HA2O15460 535 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 TAS2R42Q7RTR8 314 aa11.8□□□□□ -0.52
CHFR-201ENST00000266880 CYP26B1Q9NR63 512 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms