RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 SLC35G2Q8TBE7 412 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 TXLNGYQ9BZA5 131 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 ARHGAP28Q9P2N2 729 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 TISP43B9A030 160 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 PGRMC1O00264 195 aaKnown RBP12.09□□□□□ -0.47
MSH3-201ENST00000265081 ZNF862O60290 1169 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 EXOC3O60645 756 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 GMPSP49915 693 aaPredicted RBP12.09□□□□□ -0.47
MSH3-201ENST00000265081 SKOR1P84550 965 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 CUL1Q13616 776 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 CLUL1Q15846 466 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 HELQQ8TDG4 1101 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 BSNDQ8WZ55 320 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 DDX1Q92499 740 aaKnown RBP12.09□□□□□ -0.47
MSH3-201ENST00000265081 ZFP91Q96JP5 570 aaPredicted RBP12.09□□□□□ -0.47
MSH3-201ENST00000265081 PKNOX2Q96KN3 472 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 CARD9Q9H257 536 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 CCDC66A2RUB6 948 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 NPTX2P47972 431 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 GYS2P54840 703 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 TNNC1P63316 161 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 SLC7A5Q01650 507 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 NBPF12Q5TAG4 269 aaPredicted RBP12.09□□□□□ -0.47
MSH3-201ENST00000265081 PALB2Q86YC2 1186 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 GLYCTKQ8IVS8 523 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 ATG4CQ96DT6 458 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 CYP39A1Q9NYL5 469 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 NOC2LQ9Y3T9 749 aaKnown RBP12.09□□□□□ -0.47
MSH3-201ENST00000265081 AFG3L2Q9Y4W6 797 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 PCDHA10Q9Y5I2 948 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 TULP1O00294 542 aaPredicted RBP12.09□□□□□ -0.47
MSH3-201ENST00000265081 GRIN3BO60391 1043 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 GARTP22102 1010 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 ACTN2P35609 894 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 PAK2Q13177 524 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 APOBEC3FQ8IUX4 373 aaKnown RBP12.09□□□□□ -0.47
MSH3-201ENST00000265081 RHOT2Q8IXI1 618 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 EFCAB13Q8IY85 973 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 MORC4Q8TE76 937 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 JDP2Q8WYK2 163 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 ARHGEF26Q96DR7 871 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 KREMEN1Q96MU8 473 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 FAM204AQ9H8W3 233 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 CD2APQ9Y5K6 639 aa12.09□□□□□ -0.47
MSH3-201ENST00000265081 ANKRD63C9JTQ0 380 aa12.08□□□□□ -0.48
MSH3-201ENST00000265081 H0YGN5 161 aa12.08□□□□□ -0.48
MSH3-201ENST00000265081 BUB1BO60566 1050 aaPredicted RBP12.08□□□□□ -0.48
MSH3-201ENST00000265081 ZC3H11AO75152 810 aaKnown RBP eCLIP12.08□□□□□ -0.48
MSH3-201ENST00000265081 HEXIM1O94992 359 aaKnown RBP12.08□□□□□ -0.48
MSH3-201ENST00000265081 CYP1A2P05177 515 aa12.08□□□□□ -0.48
MSH3-201ENST00000265081 CARSP49589 748 aaKnown RBP12.08□□□□□ -0.48
MSH3-201ENST00000265081 TMEM132BQ14DG7 1078 aa12.08□□□□□ -0.48
MSH3-201ENST00000265081 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.08□□□□□ -0.48
MSH3-201ENST00000265081 EPS8L1Q8TE68 723 aa12.08□□□□□ -0.48
MSH3-201ENST00000265081 PARD3BQ8TEW8 1205 aa12.08□□□□□ -0.48
MSH3-201ENST00000265081 TAF1DQ9H5J8 278 aaPredicted RBP12.08□□□□□ -0.48
MSH3-201ENST00000265081 TMEM8AQ9HCN3 771 aa12.08□□□□□ -0.48
MSH3-201ENST00000265081 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.08□□□□□ -0.48
MSH3-201ENST00000265081 TAS2R14Q9NYV8 317 aa12.08□□□□□ -0.48
MSH3-201ENST00000265081 EXOC7Q9UPT5 735 aa12.08□□□□□ -0.48
MSH3-201ENST00000265081 NFS1Q9Y697 457 aa12.08□□□□□ -0.48
MSH3-201ENST00000265081 ADGRA3Q8IWK6 1321 aa12.08□□□□□ -0.48
MSH3-201ENST00000265081 GOLGA6BA6NDN3 693 aa12.08□□□□□ -0.48
MSH3-201ENST00000265081 EIF2AK2P19525 551 aaKnown RBP12.08□□□□□ -0.48
MSH3-201ENST00000265081 ERVK-9P63128 1117 aa12.08□□□□□ -0.48
MSH3-201ENST00000265081 LRIG3Q6UXM1 1119 aa12.08□□□□□ -0.48
MSH3-201ENST00000265081 U2AF1L4Q8WU68 220 aaKnown RBP12.08□□□□□ -0.48
MSH3-201ENST00000265081 KLRG1Q96E93 195 aa12.08□□□□□ -0.48
MSH3-201ENST00000265081 RPS6KC1Q96S38 1066 aa12.08□□□□□ -0.48
MSH3-201ENST00000265081 PSMB7Q99436 277 aa12.08□□□□□ -0.48
MSH3-201ENST00000265081 XPNPEP1Q9NQW7 623 aa12.08□□□□□ -0.48
MSH3-201ENST00000265081 RNF146Q9NTX7 359 aa12.08□□□□□ -0.48
MSH3-201ENST00000265081 RNF216Q9NWF9 866 aaPredicted RBP12.08□□□□□ -0.48
MSH3-201ENST00000265081 MAFBQ9Y5Q3 323 aaPredicted RBP12.08□□□□□ -0.48
MSH3-201ENST00000265081 DDX39AO00148 427 aaKnown RBP12.08□□□□□ -0.48
MSH3-201ENST00000265081 NR3C2P08235 984 aa12.08□□□□□ -0.48
MSH3-201ENST00000265081 KRT13P13646 458 aa12.08□□□□□ -0.48
MSH3-201ENST00000265081 MTFR1LQ9H019 292 aa12.08□□□□□ -0.48
MSH3-201ENST00000265081 OSGEPQ9NPF4 335 aa12.08□□□□□ -0.48
MSH3-201ENST00000265081 ZHX1Q9UKY1 873 aaPredicted RBP12.08□□□□□ -0.48
MSH3-201ENST00000265081 KCNK3O14649 394 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 FAM153BP0C7A2 387 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 FAM153CQ494X1 144 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 TTMPQ5BVD1 217 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 SEMA4DQ92854 862 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 FAM153AQ9UHL3 310 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 DKC1O60832 514 aaKnown RBP eCLIP12.07□□□□□ -0.48
MSH3-201ENST00000265081 RTN2O75298 545 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 EDNRBP24530 442 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 CTNNA2P26232 953 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 PTENP60484 403 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 BAATQ14032 418 aaPredicted RBP12.07□□□□□ -0.48
MSH3-201ENST00000265081 SNRNP35Q16560 246 aaKnown RBP12.07□□□□□ -0.48
MSH3-201ENST00000265081 ARHGEF16Q5VV41 709 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 NLRX1Q86UT6 975 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 CDHR1Q96JP9 859 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 PCDHB18PQ96TA0 734 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 KRT12Q99456 494 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 THAP2Q9H0W7 228 aa12.07□□□□□ -0.48
MSH3-201ENST00000265081 CNOT7Q9UIV1 285 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms