RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 FAM47EQ6ZV65 393 aa18.54■□□□□ 0.56
NOTCH3-201ENST00000263388 MAGI3Q5TCQ9 1506 aa18.54■□□□□ 0.56
NOTCH3-201ENST00000263388 GNA15P30679 374 aa18.54■□□□□ 0.56
NOTCH3-201ENST00000263388 ROR1Q01973 937 aa18.54■□□□□ 0.56
NOTCH3-201ENST00000263388 GPR162Q16538 588 aa18.54■□□□□ 0.56
NOTCH3-201ENST00000263388 CCDC137Q6PK04 289 aaKnown RBP18.54■□□□□ 0.56
NOTCH3-201ENST00000263388 FOXP4Q8IVH2 680 aaPredicted RBP18.54■□□□□ 0.56
NOTCH3-201ENST00000263388 ATP6V1G3Q96LB4 118 aa18.54■□□□□ 0.56
NOTCH3-201ENST00000263388 TBC1D22BQ9NU19 505 aa18.54■□□□□ 0.56
NOTCH3-201ENST00000263388 NSUN2Q08J23 767 aaKnown RBP eCLIP18.54■□□□□ 0.56
NOTCH3-201ENST00000263388 MAPRE2Q15555 327 aa18.54■□□□□ 0.56
NOTCH3-201ENST00000263388 RAD54LQ92698 747 aa18.54■□□□□ 0.56
NOTCH3-201ENST00000263388 MTRQ99707 1265 aa18.54■□□□□ 0.56
NOTCH3-201ENST00000263388 GDAQ9Y2T3 454 aa18.54■□□□□ 0.56
NOTCH3-201ENST00000263388 MCAMP43121 646 aa18.54■□□□□ 0.56
NOTCH3-201ENST00000263388 PATL1Q86TB9 770 aaKnown RBP18.54■□□□□ 0.56
NOTCH3-201ENST00000263388 MMTAG2Q9BU76 263 aaKnown RBP18.54■□□□□ 0.56
NOTCH3-201ENST00000263388 RNF103-CHMP3A0A140T963 221 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 EIF3DO15371 548 aaKnown RBP eCLIP18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 PLEKHA8P1O95397 391 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 RASSF3Q86WH2 238 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 PARVAQ9NVD7 372 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 COASYQ13057 564 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 MRGBPQ9NV56 204 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 GOLGA8IPA6NC78 632 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 GOLGA8JA6NMD2 632 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 MRPS15P82914 257 aaKnown RBP18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 PTPN12Q05209 780 aaKnown RBP18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 HIF1AQ16665 826 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 ITPRIPL1Q6GPH6 555 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 RMDN3Q96TC7 470 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 SEC31BQ9NQW1 1179 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 PARP9Q8IXQ6 854 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 CAMSAP1Q5T5Y3 1602 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 SLC27A3Q5K4L6 730 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 SYDE1Q6ZW31 735 aaPredicted RBP18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 KIAA2013Q8IYS2 634 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 EPAS1Q99814 870 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 DBNDD1Q9H9R9 158 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 SLC9A2Q9UBY0 812 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 DCTN4Q9UJW0 460 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 SNX24Q9Y343 169 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 HUS1O60921 280 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 SFNP31947 248 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 DTNBP1Q96EV8 351 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 COA1Q9GZY4 146 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 E9PCH4 1651 aa18.53■□□□□ 0.56
NOTCH3-201ENST00000263388 ZNF568Q3ZCX4 644 aa18.52■□□□□ 0.56
NOTCH3-201ENST00000263388 ULK4Q96C45 1275 aa18.52■□□□□ 0.56
NOTCH3-201ENST00000263388 OTUB1Q96FW1 271 aaPredicted RBP18.52■□□□□ 0.56
NOTCH3-201ENST00000263388 TSPY1Q01534 308 aa18.52■□□□□ 0.56
NOTCH3-201ENST00000263388 AP1B1Q10567 949 aa18.52■□□□□ 0.56
NOTCH3-201ENST00000263388 PRKAG2Q9UGJ0 569 aa18.52■□□□□ 0.56
NOTCH3-201ENST00000263388 FEM1BQ9UK73 627 aa18.52■□□□□ 0.56
NOTCH3-201ENST00000263388 RHOT1Q8IXI2 618 aa18.52■□□□□ 0.56
NOTCH3-201ENST00000263388 SFMBT1Q9UHJ3 866 aa18.52■□□□□ 0.56
NOTCH3-201ENST00000263388 AP3B1O00203 1094 aa18.52■□□□□ 0.56
NOTCH3-201ENST00000263388 NFRKBQ6P4R8 1299 aa18.52■□□□□ 0.56
NOTCH3-201ENST00000263388 DYNLL2Q96FJ2 89 aa18.52■□□□□ 0.56
NOTCH3-201ENST00000263388 AIFM3Q96NN9 605 aa18.52■□□□□ 0.56
NOTCH3-201ENST00000263388 STAP1Q9ULZ2 295 aa18.52■□□□□ 0.56
NOTCH3-201ENST00000263388 TARBP1Q13395 1621 aaKnown RBP18.52■□□□□ 0.56
NOTCH3-201ENST00000263388 HSPA9P38646 679 aaKnown RBP18.52■□□□□ 0.56
NOTCH3-201ENST00000263388 MED21Q13503 144 aa18.52■□□□□ 0.56
NOTCH3-201ENST00000263388 PCDHA6Q9UN73 950 aa18.52■□□□□ 0.56
NOTCH3-201ENST00000263388 PCDHA8Q9Y5H6 950 aa18.52■□□□□ 0.56
NOTCH3-201ENST00000263388 HAUS5O94927 633 aa18.52■□□□□ 0.55
NOTCH3-201ENST00000263388 EIF2AK2P19525 551 aaKnown RBP18.52■□□□□ 0.55
NOTCH3-201ENST00000263388 GPC3P51654 580 aa18.52■□□□□ 0.55
NOTCH3-201ENST00000263388 BEST2Q8NFU1 509 aa18.52■□□□□ 0.55
NOTCH3-201ENST00000263388 UNC13BO14795 1591 aa18.52■□□□□ 0.55
NOTCH3-201ENST00000263388 ELMOD1Q8N336 334 aa18.52■□□□□ 0.55
NOTCH3-201ENST00000263388 SUGT1Q9Y2Z0 365 aa18.52■□□□□ 0.55
NOTCH3-201ENST00000263388 FBXW4P57775 412 aa18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 KCNA1Q09470 495 aa18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 ALKBH8Q96BT7 664 aaKnown RBP18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 ZNF521Q96K83 1311 aa18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 ACAP3Q96P50 834 aa18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 STRBPQ96SI9 672 aaKnown RBP18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 SLC13A1Q9BZW2 595 aa18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 C2orf40Q9H1Z8 148 aa18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 A2ML1A8K2U0 1454 aa18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 SLC10A5Q5PT55 438 aa18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 FAM83BQ5T0W9 1011 aa18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 TOB2Q14106 344 aaPredicted RBP18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 KYAT1Q16773 422 aa18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 CYP2D7A0A087X1C5 515 aa18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 A0A1W2PQC6 194 aa18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 BRAFP15056 766 aa18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 CARSP49589 748 aaKnown RBP18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 NLRP14Q86W24 1093 aa18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 DHX40Q8IX18 779 aaKnown RBP18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 FMR1NBQ8N0W7 255 aaPredicted RBP18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 SFI1A8K8P3 1242 aa18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 IL10P22301 178 aa18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 LY9Q9HBG7 655 aa18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 DIABLOQ9NR28 239 aa18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 ABCF3Q9NUQ8 709 aa18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 TTC7AQ9ULT0 858 aaPredicted RBP18.51■□□□□ 0.55
NOTCH3-201ENST00000263388 PVALEFA0A1B0GWK0 134 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms