RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 LRRC4CQ9HCJ2 640 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 OSGEPQ9NPF4 335 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 SLC12A6Q9UHW9 1150 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 ATP6V0A2Q9Y487 856 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 DAAM1Q9Y4D1 1078 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 FGGP02679 453 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 LDHCP07864 332 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 PEX5P50542 639 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 ERVK-9P63128 1117 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 GRAMD4Q6IC98 578 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 ZNF804AQ7Z570 1209 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 GLYCTKQ8IVS8 523 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 NSRP1Q9H0G5 558 aaKnown RBP15.2■□□□□ 0.02
SCARF1-201ENST00000263071 ABCF3Q9NUQ8 709 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 TJP1Q07157 1748 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 TAF1P21675 1872 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 GRID2IPA4D2P6 1211 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 NCALDP61601 193 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 BIRC3Q13489 604 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 EXOC3L4Q17RC7 722 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 AMIGO3Q86WK7 504 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 SFR1Q86XK3 245 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 TRIM50Q86XT4 487 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 MAP7D3Q8IWC1 876 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 ADGRF4Q8IZF3 695 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 GUF1Q8N442 669 aaKnown RBP15.2■□□□□ 0.02
SCARF1-201ENST00000263071 ZMYND8Q9ULU4 1186 aaPredicted RBP15.2■□□□□ 0.02
SCARF1-201ENST00000263071 R3HDM2Q9Y2K5 976 aaKnown RBP15.2■□□□□ 0.02
SCARF1-201ENST00000263071 PCDHA1Q9Y5I3 950 aa15.2■□□□□ 0.02
SCARF1-201ENST00000263071 PHRF1Q9P1Y6 1649 aaKnown RBP15.19■□□□□ 0.02
SCARF1-201ENST00000263071 ZBTB39O15060 712 aa15.19■□□□□ 0.02
SCARF1-201ENST00000263071 CCNG1P51959 295 aa15.19■□□□□ 0.02
SCARF1-201ENST00000263071 ZFYVE27Q5T4F4 411 aa15.19■□□□□ 0.02
SCARF1-201ENST00000263071 RBM26Q5T8P6 1007 aaKnown RBP15.19■□□□□ 0.02
SCARF1-201ENST00000263071 IRGCQ6NXR0 463 aa15.19■□□□□ 0.02
SCARF1-201ENST00000263071 TPH2Q8IWU9 490 aa15.19■□□□□ 0.02
SCARF1-201ENST00000263071 UCMAQ8WVF2 138 aa15.19■□□□□ 0.02
SCARF1-201ENST00000263071 ADAM33Q9BZ11 813 aa15.19■□□□□ 0.02
SCARF1-201ENST00000263071 BHMT2Q9H2M3 363 aa15.19■□□□□ 0.02
SCARF1-201ENST00000263071 SNX24Q9Y343 169 aa15.19■□□□□ 0.02
SCARF1-201ENST00000263071 TRIM49P0CI25 452 aa15.19■□□□□ 0.02
SCARF1-201ENST00000263071 TRIM49CP0CI26 452 aa15.19■□□□□ 0.02
SCARF1-201ENST00000263071 MYBP10242 640 aa15.19■□□□□ 0.02
SCARF1-201ENST00000263071 XRCC5P13010 732 aaKnown RBP15.19■□□□□ 0.02
SCARF1-201ENST00000263071 CLCN2P51788 898 aa15.19■□□□□ 0.02
SCARF1-201ENST00000263071 SH3BGRP55822 239 aaPredicted RBP15.19■□□□□ 0.02
SCARF1-201ENST00000263071 KIF1AQ12756 1690 aa15.19■□□□□ 0.02
SCARF1-201ENST00000263071 SDR16C5Q8N3Y7 309 aa15.19■□□□□ 0.02
SCARF1-201ENST00000263071 XPO6Q96QU8 1125 aaKnown RBP15.19■□□□□ 0.02
SCARF1-201ENST00000263071 NEUROG2Q9H2A3 272 aa15.19■□□□□ 0.02
SCARF1-201ENST00000263071 SH3GLB2Q9NR46 395 aa15.19■□□□□ 0.02
SCARF1-201ENST00000263071 P4HA2O15460 535 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 TROVE2P10155 538 aaKnown RBP eCLIP15.18■□□□□ 0.02
SCARF1-201ENST00000263071 PCP11498 1178 aaKnown RBP15.18■□□□□ 0.02
SCARF1-201ENST00000263071 HSD17B3P37058 310 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 CCNFP41002 786 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 ITIH4Q14624 930 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 LRRC55Q6ZSA7 311 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 ZNF571Q7Z3V5 609 aaPredicted RBP15.18■□□□□ 0.02
SCARF1-201ENST00000263071 ZC3H18Q86VM9 953 aaKnown RBP15.18■□□□□ 0.02
SCARF1-201ENST00000263071 ABHD8Q96I13 439 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 ZMAT2Q96NC0 199 aaKnown RBP15.18■□□□□ 0.02
SCARF1-201ENST00000263071 RAB17Q9H0T7 212 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 ZNF180Q9UJW8 692 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 CCNL1Q9UK58 526 aaPredicted RBP15.18■□□□□ 0.02
SCARF1-201ENST00000263071 NOC2LQ9Y3T9 749 aaKnown RBP15.18■□□□□ 0.02
SCARF1-201ENST00000263071 SKIP12755 728 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 GJC1P36383 396 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 ZC2HC1CQ53FD0 456 aaPredicted RBP15.18■□□□□ 0.02
SCARF1-201ENST00000263071 HGSNATQ68CP4 663 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 IQCF2Q8IXL9 164 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 SIKE1Q9BRV8 207 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 GCNT4Q9P109 453 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 LAD1O00515 517 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 NDUFB5O43674 189 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 TBCAO75347 108 aaKnown RBP15.18■□□□□ 0.02
SCARF1-201ENST00000263071 GDF11O95390 407 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 ZNF131P52739 623 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 BTG3Q14201 252 aaPredicted RBP15.18■□□□□ 0.02
SCARF1-201ENST00000263071 CTTNQ14247 550 aaKnown RBP15.18■□□□□ 0.02
SCARF1-201ENST00000263071 LRRC14Q15048 493 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 SLC18A3Q16572 532 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 OR52E8Q6IFG1 317 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 EXOC8Q8IYI6 725 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 CYP2W1Q8TAV3 490 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 NUDCD1Q96RS6 583 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 FAM192AQ9GZU8 254 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 PCIF1Q9H4Z3 704 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 ALS2Q96Q42 1657 aa15.18■□□□□ 0.02
SCARF1-201ENST00000263071 CALB2P22676 271 aa15.17■□□□□ 0.02
SCARF1-201ENST00000263071 GSTO1P78417 241 aa15.17■□□□□ 0.02
SCARF1-201ENST00000263071 ZNF554Q86TJ5 538 aa15.17■□□□□ 0.02
SCARF1-201ENST00000263071 METTL13Q8N6R0 699 aa15.17■□□□□ 0.02
SCARF1-201ENST00000263071 RAB3IPQ96QF0 476 aaPredicted RBP15.17■□□□□ 0.02
SCARF1-201ENST00000263071 CUEDC2Q9H467 287 aa15.17■□□□□ 0.02
SCARF1-201ENST00000263071 CEP72Q9P209 647 aa15.17■□□□□ 0.02
SCARF1-201ENST00000263071 CNOT8Q9UFF9 292 aaKnown RBP15.17■□□□□ 0.02
SCARF1-201ENST00000263071 MYH6P13533 1939 aa15.17■□□□□ 0.02
SCARF1-201ENST00000263071 UBAP1LF5GYI3 381 aa15.17■□□□□ 0.02
SCARF1-201ENST00000263071 ETS2P15036 469 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms