RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 RBSNQ9H1K0 784 aa14.84□□□□□ -0.03
SGCA-201ENST00000262018 ATP6V0A4Q9HBG4 840 aa14.84□□□□□ -0.03
SGCA-201ENST00000262018 GPR179Q6PRD1 2367 aa14.84□□□□□ -0.03
SGCA-201ENST00000262018 GSTTP1A0A1W2PQM5 241 aa14.83□□□□□ -0.03
SGCA-201ENST00000262018 SP9P0CG40 484 aa14.83□□□□□ -0.03
SGCA-201ENST00000262018 SDHBP21912 280 aa14.83□□□□□ -0.03
SGCA-201ENST00000262018 ADCY7P51828 1080 aa14.83□□□□□ -0.03
SGCA-201ENST00000262018 ATP2C1P98194 919 aaPredicted RBP14.83□□□□□ -0.03
SGCA-201ENST00000262018 KRT76Q01546 638 aa14.83□□□□□ -0.03
SGCA-201ENST00000262018 ZNF174Q15697 407 aa14.83□□□□□ -0.03
SGCA-201ENST00000262018 CAMK4Q16566 473 aa14.83□□□□□ -0.03
SGCA-201ENST00000262018 SPECC1Q5M775 1068 aa14.83□□□□□ -0.03
SGCA-201ENST00000262018 XRRA1Q6P2D8 792 aa14.83□□□□□ -0.03
SGCA-201ENST00000262018 SLC24A5Q71RS6 500 aa14.83□□□□□ -0.03
SGCA-201ENST00000262018 SEPT1Q8WYJ6 367 aa14.83□□□□□ -0.03
SGCA-201ENST00000262018 ANP32BQ92688 251 aaKnown RBP14.83□□□□□ -0.03
SGCA-201ENST00000262018 TIGD1Q96MW7 591 aa14.83□□□□□ -0.03
SGCA-201ENST00000262018 CLIC6Q96NY7 704 aa14.83□□□□□ -0.03
SGCA-201ENST00000262018 SMARCAD1Q9H4L7 1026 aa14.83□□□□□ -0.03
SGCA-201ENST00000262018 KCNK12Q9HB15 430 aa14.83□□□□□ -0.03
SGCA-201ENST00000262018 RIC8AQ9NPQ8 531 aa14.83□□□□□ -0.03
SGCA-201ENST00000262018 RGS18Q9NS28 235 aa14.83□□□□□ -0.03
SGCA-201ENST00000262018 C1orf112Q9NSG2 853 aa14.83□□□□□ -0.03
SGCA-201ENST00000262018 DZANK1Q9NVP4 752 aa14.83□□□□□ -0.03
SGCA-201ENST00000262018 GINS2Q9Y248 185 aa14.83□□□□□ -0.03
SGCA-201ENST00000262018 C9IYK1 514 aa14.83□□□□□ -0.04
SGCA-201ENST00000262018 MEIS2O14770 477 aa14.83□□□□□ -0.04
SGCA-201ENST00000262018 NARSO43776 548 aaKnown RBP14.83□□□□□ -0.04
SGCA-201ENST00000262018 CFHP08603 1231 aa14.83□□□□□ -0.04
SGCA-201ENST00000262018 PPM1AP35813 382 aa14.83□□□□□ -0.04
SGCA-201ENST00000262018 TBC1D8BQ0IIM8 1120 aa14.83□□□□□ -0.04
SGCA-201ENST00000262018 OTOP3Q7RTS5 596 aa14.83□□□□□ -0.04
SGCA-201ENST00000262018 GIMAP8Q8ND71 665 aaPredicted RBP14.83□□□□□ -0.04
SGCA-201ENST00000262018 TRAPPC12Q8WVT3 735 aa14.83□□□□□ -0.04
SGCA-201ENST00000262018 SPG21Q9NZD8 308 aa14.83□□□□□ -0.04
SGCA-201ENST00000262018 RALYQ9UKM9 306 aaKnown RBP14.83□□□□□ -0.04
SGCA-201ENST00000262018 NOC2LQ9Y3T9 749 aaKnown RBP14.83□□□□□ -0.04
SGCA-201ENST00000262018 LOXHD1Q8IVV2 1947 aa14.82□□□□□ -0.04
SGCA-201ENST00000262018 ATRXP46100 2492 aa14.82□□□□□ -0.04
SGCA-201ENST00000262018 FRMPD4Q14CM0 1322 aa14.82□□□□□ -0.04
SGCA-201ENST00000262018 KDM3AQ9Y4C1 1321 aa14.82□□□□□ -0.04
SGCA-201ENST00000262018 FRYLO94915 3013 aa14.82□□□□□ -0.04
SGCA-201ENST00000262018 KRBA1A5PL33 1030 aa14.82□□□□□ -0.04
SGCA-201ENST00000262018 RPS6KA5O75582 802 aa14.82□□□□□ -0.04
SGCA-201ENST00000262018 ZNF202O95125 648 aa14.82□□□□□ -0.04
SGCA-201ENST00000262018 CXCL14O95715 111 aa14.82□□□□□ -0.04
SGCA-201ENST00000262018 CCDC192P0DO97 292 aa14.82□□□□□ -0.04
SGCA-201ENST00000262018 SYKP43405 635 aa14.82□□□□□ -0.04
SGCA-201ENST00000262018 NONOQ15233 471 aaKnown RBP eCLIP14.82□□□□□ -0.04
SGCA-201ENST00000262018 USP17L6PQ6QN14 398 aa14.82□□□□□ -0.04
SGCA-201ENST00000262018 TMC5Q6UXY8 1006 aa14.82□□□□□ -0.04
SGCA-201ENST00000262018 LRRC55Q6ZSA7 311 aa14.82□□□□□ -0.04
SGCA-201ENST00000262018 NLRX1Q86UT6 975 aa14.82□□□□□ -0.04
SGCA-201ENST00000262018 REXO1Q8N1G1 1221 aaKnown RBP14.82□□□□□ -0.04
SGCA-201ENST00000262018 C4orf32Q8N8J7 132 aa14.82□□□□□ -0.04
SGCA-201ENST00000262018 SUMF1Q8NBK3 374 aa14.82□□□□□ -0.04
SGCA-201ENST00000262018 FEZF2Q8TBJ5 459 aa14.82□□□□□ -0.04
SGCA-201ENST00000262018 TMEM161AQ9NX61 479 aa14.82□□□□□ -0.04
SGCA-201ENST00000262018 NCDNQ9UBB6 729 aa14.82□□□□□ -0.04
SGCA-201ENST00000262018 CA14Q9ULX7 337 aa14.82□□□□□ -0.04
SGCA-201ENST00000262018 PCDHA2Q9Y5H9 948 aa14.82□□□□□ -0.04
SGCA-201ENST00000262018 ZFHX4Q86UP3 3567 aa14.82□□□□□ -0.04
SGCA-201ENST00000262018 DCDC2BA2VCK2 349 aa14.81□□□□□ -0.04
SGCA-201ENST00000262018 ATP9AO75110 1047 aa14.81□□□□□ -0.04
SGCA-201ENST00000262018 DCNP07585 359 aaKnown RBP14.81□□□□□ -0.04
SGCA-201ENST00000262018 EPCAMP16422 314 aa14.81□□□□□ -0.04
SGCA-201ENST00000262018 CLK2P49760 499 aaKnown RBP14.81□□□□□ -0.04
SGCA-201ENST00000262018 GRIN1Q05586 938 aa14.81□□□□□ -0.04
SGCA-201ENST00000262018 PTGDRQ13258 359 aa14.81□□□□□ -0.04
SGCA-201ENST00000262018 ORC2Q13416 577 aaPredicted RBP14.81□□□□□ -0.04
SGCA-201ENST00000262018 COL9A2Q14055 689 aaPredicted RBP14.81□□□□□ -0.04
SGCA-201ENST00000262018 INF2Q27J81 1249 aa14.81□□□□□ -0.04
SGCA-201ENST00000262018 ARL6IP4Q66PJ3 421 aaKnown RBP14.81□□□□□ -0.04
SGCA-201ENST00000262018 CCDC149Q6ZUS6 474 aa14.81□□□□□ -0.04
SGCA-201ENST00000262018 CKAP2LQ8IYA6 745 aa14.81□□□□□ -0.04
SGCA-201ENST00000262018 TMEM117Q9H0C3 514 aa14.81□□□□□ -0.04
SGCA-201ENST00000262018 TBC1D17Q9HA65 648 aa14.81□□□□□ -0.04
SGCA-201ENST00000262018 FAM13BQ9NYF5 915 aa14.81□□□□□ -0.04
SGCA-201ENST00000262018 PKD2L1Q9P0L9 805 aa14.81□□□□□ -0.04
SGCA-201ENST00000262018 WNT16Q9UBV4 365 aa14.81□□□□□ -0.04
SGCA-201ENST00000262018 CDV3Q9UKY7 258 aaKnown RBP14.81□□□□□ -0.04
SGCA-201ENST00000262018 USP24Q9UPU5 2620 aa14.81□□□□□ -0.04
SGCA-201ENST00000262018 SPDYE3A6NKU9 549 aa14.8□□□□□ -0.04
SGCA-201ENST00000262018 FOSP01100 380 aaPredicted RBP14.8□□□□□ -0.04
SGCA-201ENST00000262018 MCM7P33993 719 aa14.8□□□□□ -0.04
SGCA-201ENST00000262018 AP3B2Q13367 1082 aa14.8□□□□□ -0.04
SGCA-201ENST00000262018 BMS1Q14692 1282 aaKnown RBP14.8□□□□□ -0.04
SGCA-201ENST00000262018 UBE2SQ16763 222 aa14.8□□□□□ -0.04
SGCA-201ENST00000262018 C1orf210Q8IVY1 113 aa14.8□□□□□ -0.04
SGCA-201ENST00000262018 ELOA2Q8IYF1 753 aaPredicted RBP14.8□□□□□ -0.04
SGCA-201ENST00000262018 NME8Q8N427 588 aa14.8□□□□□ -0.04
SGCA-201ENST00000262018 CASD1Q96PB1 797 aa14.8□□□□□ -0.04
SGCA-201ENST00000262018 CSRNP2Q9H175 543 aa14.8□□□□□ -0.04
SGCA-201ENST00000262018 CDHR5Q9HBB8 845 aa14.8□□□□□ -0.04
SGCA-201ENST00000262018 KCNH3Q9ULD8 1083 aa14.8□□□□□ -0.04
SGCA-201ENST00000262018 ST3GAL5Q9UNP4 418 aa14.8□□□□□ -0.04
SGCA-201ENST00000262018 CFAP47Q6ZTR5 3102 aa14.79□□□□□ -0.04
SGCA-201ENST00000262018 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.79□□□□□ -0.04
SGCA-201ENST00000262018 SMIM35A0A1B0GVV1 85 aa14.79□□□□□ -0.04
SGCA-201ENST00000262018 SPDYE4A6NLX3 237 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms