RNA–Protein interactions for RNA: ENST00000261203.7

LIN7A-201, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 989 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-201ENST00000261203 FBXO18Q8NFZ0 1043 aa10.3□□□□□ -0.76
LIN7A-201ENST00000261203 ERMNQ8TAM6 284 aa10.3□□□□□ -0.76
LIN7A-201ENST00000261203 URGCPQ8TCY9 931 aa10.3□□□□□ -0.76
LIN7A-201ENST00000261203 SPOCK2Q92563 424 aa10.3□□□□□ -0.76
LIN7A-201ENST00000261203 CCDC51Q96ER9 411 aa10.3□□□□□ -0.76
LIN7A-201ENST00000261203 TUFT1Q9NNX1 390 aa10.3□□□□□ -0.76
LIN7A-201ENST00000261203 BMP2KQ9NSY1 1161 aaPredicted RBP10.3□□□□□ -0.76
LIN7A-201ENST00000261203 KANSL3Q9P2N6 904 aa10.3□□□□□ -0.76
LIN7A-201ENST00000261203 STK39Q9UEW8 545 aa10.3□□□□□ -0.76
LIN7A-201ENST00000261203 BARX2Q9UMQ3 279 aaPredicted RBP10.3□□□□□ -0.76
LIN7A-201ENST00000261203 PCDHB2Q9Y5E7 798 aa10.3□□□□□ -0.76
LIN7A-201ENST00000261203 POTEMA6NI47 508 aa10.29□□□□□ -0.76
LIN7A-201ENST00000261203 PRR33A8MZF0 331 aa10.29□□□□□ -0.76
LIN7A-201ENST00000261203 WNT7AO00755 349 aa10.29□□□□□ -0.76
LIN7A-201ENST00000261203 PER2O15055 1255 aa10.29□□□□□ -0.76
LIN7A-201ENST00000261203 DCXO43602 365 aa10.29□□□□□ -0.76
LIN7A-201ENST00000261203 ZC3H11AO75152 810 aaKnown RBP eCLIP10.29□□□□□ -0.76
LIN7A-201ENST00000261203 OR52Z1P0C646 297 aa10.29□□□□□ -0.76
LIN7A-201ENST00000261203 HOXA11P31270 313 aaPredicted RBP10.29□□□□□ -0.76
LIN7A-201ENST00000261203 PBX3P40426 434 aa10.29□□□□□ -0.76
LIN7A-201ENST00000261203 TRAPPC10P48553 1259 aa10.29□□□□□ -0.76
LIN7A-201ENST00000261203 RARRES1P49788 294 aa10.29□□□□□ -0.76
LIN7A-201ENST00000261203 PTENP60484 403 aa10.29□□□□□ -0.76
LIN7A-201ENST00000261203 GNL2Q13823 731 aaKnown RBP10.29□□□□□ -0.76
LIN7A-201ENST00000261203 NOTUMQ6P988 496 aa10.29□□□□□ -0.76
LIN7A-201ENST00000261203 ALYREFQ86V81 257 aaKnown RBP10.29□□□□□ -0.76
LIN7A-201ENST00000261203 LPPQ93052 612 aa10.29□□□□□ -0.76
LIN7A-201ENST00000261203 TMEM169Q96HH4 297 aa10.29□□□□□ -0.76
LIN7A-201ENST00000261203 KIF2CQ99661 725 aa10.29□□□□□ -0.76
LIN7A-201ENST00000261203 NFKBIZQ9BYH8 718 aa10.29□□□□□ -0.76
LIN7A-201ENST00000261203 TMEM60Q9H2L4 133 aa10.29□□□□□ -0.76
LIN7A-201ENST00000261203 MINDY3Q9H8M7 445 aa10.29□□□□□ -0.76
LIN7A-201ENST00000261203 RSAD1Q9HA92 442 aa10.29□□□□□ -0.76
LIN7A-201ENST00000261203 UBN1Q9NPG3 1134 aa10.29□□□□□ -0.76
LIN7A-201ENST00000261203 XPNPEP1Q9NQW7 623 aa10.29□□□□□ -0.76
LIN7A-201ENST00000261203 TBC1D13Q9NVG8 400 aa10.29□□□□□ -0.76
LIN7A-201ENST00000261203 NOL7Q9UMY1 257 aaKnown RBP10.29□□□□□ -0.76
LIN7A-201ENST00000261203 INPP5FQ9Y2H2 1132 aa10.29□□□□□ -0.76
LIN7A-201ENST00000261203 HIDE1A8MVS5 230 aa10.28□□□□□ -0.76
LIN7A-201ENST00000261203 OFD1O75665 1012 aa10.28□□□□□ -0.76
LIN7A-201ENST00000261203 SPATA31C1P0DKV0 1188 aa10.28□□□□□ -0.76
LIN7A-201ENST00000261203 HOXB8P17481 243 aaPredicted RBP10.28□□□□□ -0.76
LIN7A-201ENST00000261203 NCLP19338 710 aaKnown RBP10.28□□□□□ -0.76
LIN7A-201ENST00000261203 ATP2B1P20020 1258 aa10.28□□□□□ -0.76
LIN7A-201ENST00000261203 MUTP22033 750 aa10.28□□□□□ -0.76
LIN7A-201ENST00000261203 ARL2P36404 184 aa10.28□□□□□ -0.76
LIN7A-201ENST00000261203 KCNC3Q14003 757 aa10.28□□□□□ -0.76
LIN7A-201ENST00000261203 GIT2Q14161 759 aa10.28□□□□□ -0.76
LIN7A-201ENST00000261203 LONRF3Q496Y0 759 aa10.28□□□□□ -0.76
LIN7A-201ENST00000261203 AGMOQ6ZNB7 445 aa10.28□□□□□ -0.76
LIN7A-201ENST00000261203 DDX53Q86TM3 631 aaKnown RBP10.28□□□□□ -0.76
LIN7A-201ENST00000261203 NOSTRINQ8IVI9 506 aa10.28□□□□□ -0.76
LIN7A-201ENST00000261203 MRPL43Q8N983 215 aaKnown RBP10.28□□□□□ -0.76
LIN7A-201ENST00000261203 MCPH1Q8NEM0 835 aa10.28□□□□□ -0.76
LIN7A-201ENST00000261203 VN1R2Q8NFZ6 395 aa10.28□□□□□ -0.76
LIN7A-201ENST00000261203 PIGOQ8TEQ8 1089 aa10.28□□□□□ -0.76
LIN7A-201ENST00000261203 CASP10Q92851 521 aa10.28□□□□□ -0.76
LIN7A-201ENST00000261203 NACC1Q96RE7 527 aa10.28□□□□□ -0.76
LIN7A-201ENST00000261203 TMEM175Q9BSA9 504 aa10.28□□□□□ -0.76
LIN7A-201ENST00000261203 POLR3CQ9BUI4 534 aaPredicted RBP10.28□□□□□ -0.76
LIN7A-201ENST00000261203 NRDE2Q9H7Z3 1164 aa10.28□□□□□ -0.76
LIN7A-201ENST00000261203 DBR1Q9UK59 544 aaKnown RBP10.28□□□□□ -0.76
LIN7A-201ENST00000261203 KIF3AQ9Y496 699 aa10.28□□□□□ -0.76
LIN7A-201ENST00000261203 USP15Q9Y4E8 981 aaPredicted RBP10.28□□□□□ -0.76
LIN7A-201ENST00000261203 WDFY4Q6ZS81 3184 aa10.28□□□□□ -0.76
LIN7A-201ENST00000261203 FAM86C2PA6NEL3 165 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 C2orf71A6NGG8 1288 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 MEIS3P2A8K0S8 358 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 NT5C1B-RDH14C9J2C7 533 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 INO80B-WBP1J3KQ70 363 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 ST18O60284 1047 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 TSPAN1O60635 241 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 USO1O60763 962 aaKnown RBP10.27□□□□□ -0.77
LIN7A-201ENST00000261203 GALTP07902 379 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 ITGA4P13612 1032 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 U2AF2P26368 475 aaKnown RBP eCLIP10.27□□□□□ -0.77
LIN7A-201ENST00000261203 RPA1P27694 616 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 TECP42680 631 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 MBTD1Q05BQ5 628 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 CAPSQ13938 189 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 RABEP1Q15276 862 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 ZNF174Q15697 407 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 TPRNQ4KMQ1 711 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 TTC38Q5R3I4 469 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 UBXN11Q5T124 520 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 HAUS3Q68CZ6 603 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 ANKRD54Q6NXT1 300 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 CATSPER3Q86XQ3 398 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 HACE1Q8IYU2 909 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 VPS52Q8N1B4 723 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 ASAP3Q8TDY4 903 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 SUSD6Q92537 303 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 IGSF21Q96ID5 467 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 FAM193BQ96PV7 902 aaPredicted RBP10.27□□□□□ -0.77
LIN7A-201ENST00000261203 PHF7Q9BWX1 381 aaPredicted RBP10.27□□□□□ -0.77
LIN7A-201ENST00000261203 GBP3Q9H0R5 595 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 ZBP1Q9H171 429 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 CSRNP2Q9H175 543 aa10.27□□□□□ -0.77
LIN7A-201ENST00000261203 POLR3FQ9H1D9 316 aaPredicted RBP10.27□□□□□ -0.77
LIN7A-201ENST00000261203 DAXXQ9UER7 740 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms