RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 PCDH10Q9P2E7 1040 aa19.14■□□□□ 0.65
SRSF1-201ENST00000258962 PCDHB13Q9Y5F0 798 aa19.14■□□□□ 0.65
SRSF1-201ENST00000258962 EMSYQ7Z589 1322 aa19.13■□□□□ 0.65
SRSF1-201ENST00000258962 CETN3O15182 167 aa19.13■□□□□ 0.65
SRSF1-201ENST00000258962 GNA14O95837 355 aa19.13■□□□□ 0.65
SRSF1-201ENST00000258962 NR3C1P04150 777 aa19.13■□□□□ 0.65
SRSF1-201ENST00000258962 TPM2P07951 284 aa19.13■□□□□ 0.65
SRSF1-201ENST00000258962 CYP2C9P11712 490 aa19.13■□□□□ 0.65
SRSF1-201ENST00000258962 ITGB8P26012 769 aa19.13■□□□□ 0.65
SRSF1-201ENST00000258962 PEX3P56589 373 aa19.13■□□□□ 0.65
SRSF1-201ENST00000258962 ALCAMQ13740 583 aa19.13■□□□□ 0.65
SRSF1-201ENST00000258962 TARBP2Q15633 366 aaKnown RBP19.13■□□□□ 0.65
SRSF1-201ENST00000258962 NFIL3Q16649 462 aa19.13■□□□□ 0.65
SRSF1-201ENST00000258962 VWA3BQ502W6 1294 aa19.13■□□□□ 0.65
SRSF1-201ENST00000258962 GDF6Q6KF10 455 aaPredicted RBP19.13■□□□□ 0.65
SRSF1-201ENST00000258962 C17orf53Q8N3J3 647 aaPredicted RBP19.13■□□□□ 0.65
SRSF1-201ENST00000258962 TMEM199Q8N511 208 aa19.13■□□□□ 0.65
SRSF1-201ENST00000258962 MCPH1Q8NEM0 835 aa19.13■□□□□ 0.65
SRSF1-201ENST00000258962 KIFAP3Q92845 792 aa19.13■□□□□ 0.65
SRSF1-201ENST00000258962 PES1O00541 588 aaKnown RBP19.12■□□□□ 0.65
SRSF1-201ENST00000258962 CLIC2O15247 247 aa19.12■□□□□ 0.65
SRSF1-201ENST00000258962 SLC16A4O15374 487 aa19.12■□□□□ 0.65
SRSF1-201ENST00000258962 GYPCP04921 128 aa19.12■□□□□ 0.65
SRSF1-201ENST00000258962 GNAT1P11488 350 aa19.12■□□□□ 0.65
SRSF1-201ENST00000258962 SKILP12757 684 aa19.12■□□□□ 0.65
SRSF1-201ENST00000258962 CYP2C18P33260 490 aa19.12■□□□□ 0.65
SRSF1-201ENST00000258962 GTF2BQ00403 316 aa19.12■□□□□ 0.65
SRSF1-201ENST00000258962 FPGSQ05932 587 aa19.12■□□□□ 0.65
SRSF1-201ENST00000258962 RBL2Q08999 1139 aa19.12■□□□□ 0.65
SRSF1-201ENST00000258962 EMC2Q15006 297 aa19.12■□□□□ 0.65
SRSF1-201ENST00000258962 CCDC40Q4G0X9 1142 aa19.12■□□□□ 0.65
SRSF1-201ENST00000258962 MFSD5Q6N075 450 aa19.12■□□□□ 0.65
SRSF1-201ENST00000258962 TRIM59Q8IWR1 403 aa19.12■□□□□ 0.65
SRSF1-201ENST00000258962 CCDC155Q8N6L0 562 aa19.12■□□□□ 0.65
SRSF1-201ENST00000258962 RETREG2Q8NC44 543 aa19.12■□□□□ 0.65
SRSF1-201ENST00000258962 DHX33Q9H6R0 707 aaKnown RBP19.12■□□□□ 0.65
SRSF1-201ENST00000258962 C17orf102A2RUQ5 167 aa19.11■□□□□ 0.65
SRSF1-201ENST00000258962 NRDCO43847 1150 aa19.11■□□□□ 0.65
SRSF1-201ENST00000258962 SMIM10L2AP0DMW4 78 aa19.11■□□□□ 0.65
SRSF1-201ENST00000258962 SMIM10L2BP0DMW5 78 aa19.11■□□□□ 0.65
SRSF1-201ENST00000258962 NPTX2P47972 431 aa19.11■□□□□ 0.65
SRSF1-201ENST00000258962 ADKP55263 362 aaKnown RBP19.11■□□□□ 0.65
SRSF1-201ENST00000258962 BFSP2Q13515 415 aa19.11■□□□□ 0.65
SRSF1-201ENST00000258962 PLPPR4Q7Z2D5 763 aa19.11■□□□□ 0.65
SRSF1-201ENST00000258962 HAUS6Q7Z4H7 955 aa19.11■□□□□ 0.65
SRSF1-201ENST00000258962 SPIRE2Q8WWL2 714 aa19.11■□□□□ 0.65
SRSF1-201ENST00000258962 PRO3102Q9H379 93 aa19.11■□□□□ 0.65
SRSF1-201ENST00000258962 TMX1Q9H3N1 280 aa19.11■□□□□ 0.65
SRSF1-201ENST00000258962 NDST4Q9H3R1 872 aa19.11■□□□□ 0.65
SRSF1-201ENST00000258962 C17orf75Q9HAS0 396 aa19.11■□□□□ 0.65
SRSF1-201ENST00000258962 AGPAT3Q9NRZ7 376 aa19.11■□□□□ 0.65
SRSF1-201ENST00000258962 NRBP2Q9NSY0 501 aa19.11■□□□□ 0.65
SRSF1-201ENST00000258962 A0A1W2PPC1 479 aa19.1■□□□□ 0.65
SRSF1-201ENST00000258962 MARK3P27448 753 aa19.1■□□□□ 0.65
SRSF1-201ENST00000258962 FXR1P51114 621 aaKnown RBP eCLIP19.1■□□□□ 0.65
SRSF1-201ENST00000258962 POLGP54098 1239 aaPredicted RBP19.1■□□□□ 0.65
SRSF1-201ENST00000258962 TBC1D8BQ0IIM8 1120 aa19.1■□□□□ 0.65
SRSF1-201ENST00000258962 TMEM139Q8IV31 216 aa19.1■□□□□ 0.65
SRSF1-201ENST00000258962 TMEM161BQ8NDZ6 487 aa19.1■□□□□ 0.65
SRSF1-201ENST00000258962 FAM167AQ96KS9 214 aa19.1■□□□□ 0.65
SRSF1-201ENST00000258962 ACCSQ96QU6 501 aa19.1■□□□□ 0.65
SRSF1-201ENST00000258962 ERGIC2Q96RQ1 377 aa19.1■□□□□ 0.65
SRSF1-201ENST00000258962 NTPCRQ9BSD7 190 aaKnown RBP19.1■□□□□ 0.65
SRSF1-201ENST00000258962 KIFC3Q9BVG8 833 aa19.1■□□□□ 0.65
SRSF1-201ENST00000258962 GBP3Q9H0R5 595 aa19.1■□□□□ 0.65
SRSF1-201ENST00000258962 POLR3FQ9H1D9 316 aaPredicted RBP19.1■□□□□ 0.65
SRSF1-201ENST00000258962 RNPEPQ9H4A4 650 aa19.1■□□□□ 0.65
SRSF1-201ENST00000258962 DMAC2Q9NW81 257 aa19.1■□□□□ 0.65
SRSF1-201ENST00000258962 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.1■□□□□ 0.654e-17■■■□□ 14.8
SRSF1-201ENST00000258962 ADGRA3Q8IWK6 1321 aa19.1■□□□□ 0.65
SRSF1-201ENST00000258962 AKR1B15C9JRZ8 316 aaPredicted RBP19.1■□□□□ 0.65
SRSF1-201ENST00000258962 RNF225M0QZC1 329 aaPredicted RBP19.1■□□□□ 0.65
SRSF1-201ENST00000258962 SLC16A3O15427 465 aaKnown RBP19.1■□□□□ 0.65
SRSF1-201ENST00000258962 MFAP3LO75121 409 aa19.1■□□□□ 0.65
SRSF1-201ENST00000258962 AKAP3O75969 853 aa19.1■□□□□ 0.65
SRSF1-201ENST00000258962 RPL13P26373 211 aaKnown RBP19.1■□□□□ 0.65
SRSF1-201ENST00000258962 CASP4P49662 377 aa19.1■□□□□ 0.65
SRSF1-201ENST00000258962 DMP1Q13316 513 aaPredicted RBP19.1■□□□□ 0.65
SRSF1-201ENST00000258962 PPIGQ13427 754 aaKnown RBP eCLIP19.1■□□□□ 0.655e-26■■□□□ 13.2
SRSF1-201ENST00000258962 SYCP1Q15431 976 aa19.1■□□□□ 0.65
SRSF1-201ENST00000258962 HABP4Q5JVS0 413 aaKnown RBP19.1■□□□□ 0.65
SRSF1-201ENST00000258962 PPFIBP1Q86W92 1011 aa19.1■□□□□ 0.65
SRSF1-201ENST00000258962 SETD4Q9NVD3 440 aa19.1■□□□□ 0.65
SRSF1-201ENST00000258962 CCDC169A6NNP5 214 aa19.09■□□□□ 0.65
SRSF1-201ENST00000258962 CASP14P31944 242 aa19.09■□□□□ 0.65
SRSF1-201ENST00000258962 RFC5P40937 340 aa19.09■□□□□ 0.65
SRSF1-201ENST00000258962 KLK7P49862 253 aa19.09■□□□□ 0.65
SRSF1-201ENST00000258962 SLC26A2P50443 739 aa19.09■□□□□ 0.65
SRSF1-201ENST00000258962 CCL23P55773 120 aa19.09■□□□□ 0.65
SRSF1-201ENST00000258962 ZNF200P98182 395 aaPredicted RBP19.09■□□□□ 0.65
SRSF1-201ENST00000258962 PTK7Q13308 1070 aa19.09■□□□□ 0.65
SRSF1-201ENST00000258962 TRIM14Q14142 442 aa19.09■□□□□ 0.65
SRSF1-201ENST00000258962 PLCB4Q15147 1175 aa19.09■□□□□ 0.65
SRSF1-201ENST00000258962 FKBP15Q5T1M5 1219 aa19.09■□□□□ 0.65
SRSF1-201ENST00000258962 HS2ST1Q7LGA3 356 aa19.09■□□□□ 0.65
SRSF1-201ENST00000258962 FRMD5Q7Z6J6 570 aa19.09■□□□□ 0.65
SRSF1-201ENST00000258962 SLC17A8Q8NDX2 589 aa19.09■□□□□ 0.65
SRSF1-201ENST00000258962 CAGE1Q8TC20 777 aa19.09■□□□□ 0.65
SRSF1-201ENST00000258962 ATP8B4Q8TF62 1192 aa19.09■□□□□ 0.65
SRSF1-201ENST00000258962 CPLX3Q8WVH0 158 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms