RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 BPNT1O95861 308 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 CYP17A1P05093 508 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 GSTA1P08263 222 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 POU2F1P14859 743 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 CPA3P15088 417 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 RXRAP19793 462 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 PHBP35232 272 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 GSSP48637 474 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 EIF2B2P49770 351 aaKnown RBP8.27□□□□□ -1.09
GPNMB-201ENST00000258733 SEC24CP53992 1094 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 PTK2Q05397 1052 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 UBE3CQ15386 1083 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 BMP2KLQ5H9B9 411 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 RNASEH2BQ5TBB1 312 aaKnown RBP8.27□□□□□ -1.09
GPNMB-201ENST00000258733 BTBD8Q5XKL5 378 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 KIF6Q6ZMV9 814 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.27□□□□□ -1.09
GPNMB-201ENST00000258733 USP43Q70EL4 1123 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 OTUD5Q96G74 571 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 GHITMQ9H3K2 345 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 SENP3Q9H4L4 574 aaPredicted RBP8.27□□□□□ -1.09
GPNMB-201ENST00000258733 EHD1Q9H4M9 534 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 CTTNBP2NLQ9P2B4 639 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 WDR33Q9C0J8 1336 aaKnown RBP8.27□□□□□ -1.09
GPNMB-201ENST00000258733 NKTRP30414 1462 aaKnown RBP8.27□□□□□ -1.09
GPNMB-201ENST00000258733 OR6C65A6NJZ3 312 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 E7ENQ6 273 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 TK2O00142 265 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 GREM1O60565 184 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 ATF6P18850 670 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 KCNA3P22001 575 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 ADSLP30566 484 aaPredicted RBP8.27□□□□□ -1.09
GPNMB-201ENST00000258733 SOX5P35711 763 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 IGHMBP2P38935 993 aaKnown RBP8.27□□□□□ -1.09
GPNMB-201ENST00000258733 ACY1Q03154 408 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 UBXN1Q04323 297 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 C21orf62-AS1Q17RA5 79 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 AKAP4Q5JQC9 854 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 CYP4A22Q5TCH4 519 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 FAM122CQ6P4D5 195 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 ARHGAP36Q6ZRI8 547 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 ITIH5Q86UX2 942 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 LRRC47Q8N1G4 583 aaKnown RBP8.27□□□□□ -1.09
GPNMB-201ENST00000258733 FBF1Q8TES7 1133 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 UCMAQ8WVF2 138 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 HSPBAP1Q96EW2 488 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 CENPKQ9BS16 269 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 MRPL1Q9BYD6 325 aaKnown RBP8.27□□□□□ -1.09
GPNMB-201ENST00000258733 NUP62CLQ9H1M0 184 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 DBNDD1Q9H9R9 158 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 PLSCR2Q9NRY7 297 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.27□□□□□ -1.09
GPNMB-201ENST00000258733 PGAP2Q9UHJ9 254 aa8.27□□□□□ -1.09
GPNMB-201ENST00000258733 FRMPD1Q5SYB0 1578 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 CEP152O94986 1710 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 SPHKAPQ2M3C7 1700 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 E7EVH7 732 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 UBAP1LF5GYI3 381 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 F8W810 466 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 POP4O95707 220 aaKnown RBP8.26□□□□□ -1.09
GPNMB-201ENST00000258733 VAV1P15498 845 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 PBLDP30039 288 aaPredicted RBP8.26□□□□□ -1.09
GPNMB-201ENST00000258733 AXLP30530 894 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 ECE1P42892 770 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 SLC1A1P43005 524 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 IST1P53990 364 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 PTPN5P54829 565 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 DAB2P98082 770 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 CSTF3Q12996 717 aaKnown RBP8.26□□□□□ -1.09
GPNMB-201ENST00000258733 STK3Q13188 491 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 ZNF124Q15973 351 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 TMEM266Q2M3C6 531 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 TMEM95Q3KNT9 176 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 CCDC25Q86WR0 208 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 PSD4Q8NDX1 1056 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 PDZD8Q8NEN9 1154 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 FLAD1Q8NFF5 587 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 PTCD2Q8WV60 388 aaKnown RBP8.26□□□□□ -1.09
GPNMB-201ENST00000258733 VPS35Q96QK1 796 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 CCDC28BQ9BUN5 200 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 C8orf33Q9H7E9 229 aaPredicted RBP8.26□□□□□ -1.09
GPNMB-201ENST00000258733 MRPL40Q9NQ50 206 aaKnown RBP8.26□□□□□ -1.09
GPNMB-201ENST00000258733 ANAPC5Q9UJX4 755 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 RBMX2Q9Y388 322 aaKnown RBP8.26□□□□□ -1.09
GPNMB-201ENST00000258733 GPSM3Q9Y4H4 160 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 TTC21BQ7Z4L5 1316 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 MYO3BQ8WXR4 1341 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 NEO1Q92859 1461 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 TYW5A2RUC4 315 aaKnown RBP8.26□□□□□ -1.09
GPNMB-201ENST00000258733 E9PBE3 544 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 DDX58O95786 925 aaKnown RBP8.26□□□□□ -1.09
GPNMB-201ENST00000258733 MTHFD1P11586 935 aaKnown RBP8.26□□□□□ -1.09
GPNMB-201ENST00000258733 SLC26A3P40879 764 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 CASP2P42575 452 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 PTPN9P43378 593 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 MAPKAPK2P49137 400 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 CTDSPL2Q05D32 466 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 ZNF423Q2M1K9 1284 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 TTBK2Q6IQ55 1244 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 ARMCX5Q6P1M9 558 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms