RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 CRKLP46109 303 aaKnown RBP5.09□□□□□ -1.59
RC3H1-201ENST00000258349 LAMB3Q13751 1172 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 KRT33BQ14525 404 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 LRRC41Q15345 812 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 MCPH1Q8NEM0 835 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 FAM149B1Q96BN6 582 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 ALKBH8Q96BT7 664 aaKnown RBP5.09□□□□□ -1.59
RC3H1-201ENST00000258349 NAV1Q8NEY1 1877 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 PITPNM2Q9BZ72 1349 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 A0A1W2PQC6 194 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 LRRC53A6NM62 1247 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 GOLGA8JA6NMD2 632 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 H2AFYO75367 372 aaKnown RBP5.09□□□□□ -1.59
RC3H1-201ENST00000258349 HNRNPCP07910 306 aaKnown RBP eCLIP5.09□□□□□ -1.59
RC3H1-201ENST00000258349 FAM161BQ96MY7 647 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 DACH2Q96NX9 599 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 PI4KBQ9UBF8 816 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 MEIS1O00470 390 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 EIF3HO15372 352 aaKnown RBP eCLIP5.09□□□□□ -1.596e-6■■■■□ 25.8
RC3H1-201ENST00000258349 ZSCAN20P17040 1043 aaPredicted RBP5.09□□□□□ -1.59
RC3H1-201ENST00000258349 CCND1P24385 295 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 SLC1A1P43005 524 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 CYP27A1Q02318 531 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 ZBTB41Q5SVQ8 909 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 SCARA5Q6ZMJ2 495 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 PLD3Q8IV08 490 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 COG1Q8WTW3 980 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 IFT43Q96FT9 208 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 MRPL1Q9BYD6 325 aaKnown RBP5.09□□□□□ -1.59
RC3H1-201ENST00000258349 PARVAQ9NVD7 372 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 LMO7Q8WWI1 1683 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 RSPH10B2B2RC85 870 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 RSPH10BP0C881 870 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 PHKA2P46019 1235 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 HSPA13P48723 471 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 TRPC1P48995 793 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 PRELPP51888 382 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 HIC1Q14526 733 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 PFKFB3Q16875 520 aaPredicted RBP5.09□□□□□ -1.59
RC3H1-201ENST00000258349 DNAL1Q4LDG9 190 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 AGBL2Q5U5Z8 902 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 PATL1Q86TB9 770 aaKnown RBP5.09□□□□□ -1.59
RC3H1-201ENST00000258349 DNAJC10Q8IXB1 793 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 KIAA2013Q8IYS2 634 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 TSSK1BQ9BXA7 367 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 PCIF1Q9H4Z3 704 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 ZNF521Q96K83 1311 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 GOLGA8IPA6NC78 632 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 TCP10L2B9ZVM9 353 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 E5RI56 91 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 CD58P19256 250 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 KLC1Q07866 573 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 NSUN2Q08J23 767 aaKnown RBP eCLIP5.09□□□□□ -1.6
RC3H1-201ENST00000258349 AASDHQ4L235 1098 aaPredicted RBP5.09□□□□□ -1.6
RC3H1-201ENST00000258349 DPP9Q86TI2 863 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 CDKL3Q8IVW4 592 aaPredicted RBP5.09□□□□□ -1.6
RC3H1-201ENST00000258349 RASGRP4Q8TDF6 673 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 EXT2Q93063 718 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 CMTM5Q96DZ9 223 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 APOL6Q9BWW8 343 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 FTOQ9C0B1 505 aaKnown RBP eCLIP5.09□□□□□ -1.6
RC3H1-201ENST00000258349 ETNK1Q9HBU6 452 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 ITIH6Q6UXX5 1313 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 AGTP01019 485 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 PYGMP11217 842 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 ATP1A3P13637 1013 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 MAP4P27816 1152 aaKnown RBP5.09□□□□□ -1.6
RC3H1-201ENST00000258349 PGM1P36871 562 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 PRCPP42785 496 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 DAB2P98082 770 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 STAT4Q14765 748 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 CCDC137Q6PK04 289 aaKnown RBP5.09□□□□□ -1.6
RC3H1-201ENST00000258349 THEM5Q8N1Q8 247 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 IL17REQ8NFR9 667 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 KCNV2Q8TDN2 545 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 TSPAN17Q96FV3 270 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 GID8Q9NWU2 228 aa5.09□□□□□ -1.6
RC3H1-201ENST00000258349 NXF1Q9UBU9 619 aaKnown RBP5.09□□□□□ -1.6
RC3H1-201ENST00000258349 RNF103-CHMP3A0A140T963 221 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 IL6STP40189 918 aaPredicted RBP5.08□□□□□ -1.6
RC3H1-201ENST00000258349 KRR1Q13601 381 aaKnown RBP5.08□□□□□ -1.6
RC3H1-201ENST00000258349 KNOP1Q1ED39 458 aaKnown RBP5.08□□□□□ -1.6
RC3H1-201ENST00000258349 HABP4Q5JVS0 413 aaKnown RBP5.08□□□□□ -1.6
RC3H1-201ENST00000258349 LRRC8EQ6NSJ5 796 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 CNKSR1Q969H4 720 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 BEGAINQ9BUH8 593 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 FOXP3Q9BZS1 431 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 WWP1Q9H0M0 922 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 C10orf88Q9H8K7 445 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 IL1RAPL1Q9NZN1 696 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 DCTN4Q9UJW0 460 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 ANGPT2O15123 496 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 ARFIP2P53365 341 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 ADCK1Q86TW2 530 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 SPICE1Q8N0Z3 855 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 C3orf20Q8ND61 904 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 PIGSQ96S52 555 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 PNMA3Q9UL41 463 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 ARFGEF2Q9Y6D5 1785 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 PJA2O43164 708 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms