RNA–Protein interactions for RNA: ENST00000255320.6

HMGB1P5-201, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 642 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-201ENST00000255320 SSPNQ14714 243 aa5.55□□□□□ -1.52
HMGB1P5-201ENST00000255320 MST1LQ2TV78 715 aa5.55□□□□□ -1.52
HMGB1P5-201ENST00000255320 SYCP2LQ5T4T6 812 aa5.55□□□□□ -1.52
HMGB1P5-201ENST00000255320 TRIM68Q6AZZ1 485 aa5.55□□□□□ -1.52
HMGB1P5-201ENST00000255320 ABHD15Q6UXT9 468 aa5.55□□□□□ -1.52
HMGB1P5-201ENST00000255320 MIGA2Q7L4E1 593 aa5.55□□□□□ -1.52
HMGB1P5-201ENST00000255320 SAPCD2Q86UD0 394 aa5.55□□□□□ -1.52
HMGB1P5-201ENST00000255320 DENND1CQ8IV53 801 aa5.55□□□□□ -1.52
HMGB1P5-201ENST00000255320 KAT5Q92993 513 aa5.55□□□□□ -1.52
HMGB1P5-201ENST00000255320 C1GALT1C1Q96EU7 318 aa5.55□□□□□ -1.52
HMGB1P5-201ENST00000255320 PAWRQ96IZ0 340 aaKnown RBP5.55□□□□□ -1.52
HMGB1P5-201ENST00000255320 IRAK3Q9Y616 596 aa5.55□□□□□ -1.52
HMGB1P5-201ENST00000255320 B3GALT2O43825 422 aa5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 TUSC2O75896 110 aa5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 FSBPO95073 299 aa5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 KRT1P04264 644 aa5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 LTA4HP09960 611 aaKnown RBP5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 GSPT1P15170 499 aaKnown RBP5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 RHCEP18577 417 aa5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 IL13P35225 146 aa5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 SLC6A9P48067 706 aa5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 RHDQ02161 417 aa5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 DSC2Q02487 901 aa5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 ZNF827Q17R98 1081 aa5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 Q6ZVL8 140 aa5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 LARP4Q71RC2 724 aaKnown RBP eCLIP5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 CLEC14AQ86T13 490 aa5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 FAM43AQ8N2R8 423 aa5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 MSL3Q8N5Y2 521 aaKnown RBP5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 GPR156Q8NFN8 814 aa5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 PJA1Q8NG27 643 aa5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 SVIPQ8NHG7 77 aa5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 FBXO41Q8TF61 875 aa5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 HDAC10Q969S8 669 aa5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 YTHDC1Q96MU7 727 aaKnown RBP5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 LRFN3Q9BTN0 628 aa5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 KATNBL1Q9H079 304 aa5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 ZNF700Q9H0M5 742 aa5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 TMEM60Q9H2L4 133 aa5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 VWA7Q9Y334 891 aa5.54□□□□□ -1.52
HMGB1P5-201ENST00000255320 FAM171A2A8MVW0 826 aa5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 FAM227AF5H4B4 570 aa5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 APAF1O14727 1248 aa5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 UBXN7O94888 489 aa5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 ZBED1O96006 694 aa5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 PI3P19957 117 aa5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 NOMO1Q15155 1222 aa5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 MAN2A1Q16706 1144 aa5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 REXO1L1PQ8IX06 675 aa5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 IFNL2Q8IZJ0 200 aa5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 CAMKK1Q8N5S9 505 aa5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 NSUN6Q8TEA1 469 aaKnown RBP5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 ZNF526Q8TF50 670 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 SNX33Q8WV41 574 aa5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 KCNN1Q92952 543 aa5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 TTC17Q96AE7 1141 aa5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 SPATA25Q9BR10 227 aa5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 B3GNT5Q9BYG0 378 aa5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 KIAA1683Q9H0B3 1180 aa5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 MAN1C1Q9NR34 630 aa5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 SIK3Q9Y2K2 1263 aa5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 PCDHB1Q9Y5F3 818 aa5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 CFAP20Q9Y6A4 193 aaKnown RBP5.53□□□□□ -1.52
HMGB1P5-201ENST00000255320 RPTORQ8N122 1335 aa5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 SH3D21A4FU49 640 aa5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 DDX3XO00571 662 aaKnown RBP eCLIP5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 AKR1B10O60218 316 aa5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 PRAMEF4O60810 478 aa5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 HRGP04196 525 aa5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 CSF2RBP32927 897 aa5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 CAP1Q01518 475 aa5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 ADAM15Q13444 863 aa5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 HDAC1Q13547 482 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 UBE3CQ15386 1083 aa5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 PPP4R4Q6NUP7 873 aa5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 CNKSR3Q6P9H4 555 aa5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 Q6ZUG5 572 aa5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 TAS1R1Q7RTX1 841 aa5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 SRGAP1Q7Z6B7 1085 aa5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 KIAA0319LQ8IZA0 1049 aa5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 LILRA3Q8N6C8 439 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 AJUBAQ96IF1 538 aa5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 PWWP2AQ96N64 755 aa5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 CGRRF1Q99675 332 aa5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 FAM204AQ9H8W3 233 aa5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 L2HGDHQ9H9P8 463 aa5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 FAM50BQ9Y247 325 aa5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 CTDP1Q9Y5B0 961 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 PCDHA13Q9Y5I0 950 aa5.52□□□□□ -1.53
HMGB1P5-201ENST00000255320 ANO9A1A5B4 782 aa5.51□□□□□ -1.53
HMGB1P5-201ENST00000255320 C2orf78A6NCI8 922 aa5.51□□□□□ -1.53
HMGB1P5-201ENST00000255320 SGTAO43765 313 aa5.51□□□□□ -1.53
HMGB1P5-201ENST00000255320 ENDOD1O94919 500 aa5.51□□□□□ -1.53
HMGB1P5-201ENST00000255320 ZNF888P0CJ79 500 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P5-201ENST00000255320 PHKG2P15735 406 aa5.51□□□□□ -1.53
HMGB1P5-201ENST00000255320 HTR1BP28222 390 aa5.51□□□□□ -1.53
HMGB1P5-201ENST00000255320 ECHS1P30084 290 aa5.51□□□□□ -1.53
HMGB1P5-201ENST00000255320 IL12RB1P42701 662 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms