RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 KIF22Q14807 665 aa23.49■■□□□ 1.35
CLN6-201ENST00000249806 SLC35G2Q8TBE7 412 aa23.49■■□□□ 1.35
CLN6-201ENST00000249806 NTPCRQ9BSD7 190 aaKnown RBP23.49■■□□□ 1.35
CLN6-201ENST00000249806 VIPAS39Q9H9C1 493 aa23.49■■□□□ 1.35
CLN6-201ENST00000249806 VPS18Q9P253 973 aa23.49■■□□□ 1.35
CLN6-201ENST00000249806 SEPT9Q9UHD8 586 aaPredicted RBP23.49■■□□□ 1.35
CLN6-201ENST00000249806 EXOC7Q9UPT5 735 aa23.49■■□□□ 1.35
CLN6-201ENST00000249806 IGSF9BQ9UPX0 1349 aa23.49■■□□□ 1.35
CLN6-201ENST00000249806 P4HA2O15460 535 aa23.49■■□□□ 1.35
CLN6-201ENST00000249806 CCDC172P0C7W6 258 aa23.49■■□□□ 1.35
CLN6-201ENST00000249806 MXI1P50539 228 aa23.49■■□□□ 1.35
CLN6-201ENST00000249806 MAP2K1Q02750 393 aaPredicted RBP23.49■■□□□ 1.35
CLN6-201ENST00000249806 SLC39A4Q6P5W5 647 aa23.49■■□□□ 1.35
CLN6-201ENST00000249806 SLFN11Q7Z7L1 901 aa23.49■■□□□ 1.35
CLN6-201ENST00000249806 DAAM2Q86T65 1068 aa23.49■■□□□ 1.35
CLN6-201ENST00000249806 CCDC125Q86Z20 511 aa23.49■■□□□ 1.35
CLN6-201ENST00000249806 GPC2Q8N158 579 aa23.49■■□□□ 1.35
CLN6-201ENST00000249806 SLC17A8Q8NDX2 589 aa23.49■■□□□ 1.35
CLN6-201ENST00000249806 SLC20A1Q8WUM9 679 aa23.49■■□□□ 1.35
CLN6-201ENST00000249806 KIFAP3Q92845 792 aa23.49■■□□□ 1.35
CLN6-201ENST00000249806 ADAM21Q9UKJ8 722 aa23.49■■□□□ 1.35
CLN6-201ENST00000249806 ATP8B3O60423 1300 aa23.48■■□□□ 1.35
CLN6-201ENST00000249806 A0A0U1RQG5 324 aaPredicted RBP23.48■■□□□ 1.35
CLN6-201ENST00000249806 SPATA31C2B4DYI2 1134 aa23.48■■□□□ 1.35
CLN6-201ENST00000249806 MAPK13O15264 365 aa23.48■■□□□ 1.35
CLN6-201ENST00000249806 GLI1P08151 1106 aa23.48■■□□□ 1.35
CLN6-201ENST00000249806 RFX1P22670 979 aa23.48■■□□□ 1.35
CLN6-201ENST00000249806 PRKCEQ02156 737 aa23.48■■□□□ 1.35
CLN6-201ENST00000249806 CNTN2Q02246 1040 aa23.48■■□□□ 1.35
CLN6-201ENST00000249806 SUPT20HL1Q3ZLR7 823 aa23.48■■□□□ 1.35
CLN6-201ENST00000249806 NOL9Q5SY16 702 aaKnown RBP23.48■■□□□ 1.35
CLN6-201ENST00000249806 ABHD15Q6UXT9 468 aa23.48■■□□□ 1.35
CLN6-201ENST00000249806 PEX26Q7Z412 305 aa23.48■■□□□ 1.35
CLN6-201ENST00000249806 USP38Q8NB14 1042 aa23.48■■□□□ 1.35
CLN6-201ENST00000249806 CNKSR2Q8WXI2 1034 aa23.48■■□□□ 1.35
CLN6-201ENST00000249806 KRT12Q99456 494 aa23.48■■□□□ 1.35
CLN6-201ENST00000249806 XPNPEP1Q9NQW7 623 aa23.48■■□□□ 1.35
CLN6-201ENST00000249806 FAN1Q9Y2M0 1017 aa23.48■■□□□ 1.35
CLN6-201ENST00000249806 ZC3H4Q9UPT8 1303 aaKnown RBP23.48■■□□□ 1.35
CLN6-201ENST00000249806 TREML2Q5T2D2 321 aa23.48■■□□□ 1.35
CLN6-201ENST00000249806 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.48■■□□□ 1.35
CLN6-201ENST00000249806 PDLIM7Q9NR12 457 aa23.48■■□□□ 1.35
CLN6-201ENST00000249806 MYH9P35579 1960 aaKnown RBP23.48■■□□□ 1.35
CLN6-201ENST00000249806 LCTP09848 1927 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 NFASCO94856 1347 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 ZSCAN5CA6NGD5 496 aaPredicted RBP23.47■■□□□ 1.35
CLN6-201ENST00000249806 ZBTB48P10074 688 aaPredicted RBP23.47■■□□□ 1.35
CLN6-201ENST00000249806 METTL13Q8N6R0 699 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 LMBR1Q8WVP7 490 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 SEMA4DQ92854 862 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 ARHGEF26Q96DR7 871 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 CDHR1Q96JP9 859 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 AGPAT1Q99943 283 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 THAP2Q9H0W7 228 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 CYP26B1Q9NR63 512 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 STXBP5LQ9Y2K9 1186 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 ARID2Q68CP9 1835 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 CEP104O60308 925 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 TMEM253P0C7T8 217 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 USP8P40818 1118 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 VGLL4Q14135 290 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 GNPTABQ3T906 1256 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 GLE1Q53GS7 698 aaKnown RBP23.47■■□□□ 1.35
CLN6-201ENST00000249806 HSP90B2PQ58FF3 399 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 SND1Q7KZF4 910 aaKnown RBP eCLIP23.47■■□□□ 1.357e-7■□□□□ 8.6
CLN6-201ENST00000249806 CYFIP1Q7L576 1253 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 NT5DC3Q86UY8 548 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 PARD3BQ8TEW8 1205 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 ZNF526Q8TF50 670 aaPredicted RBP23.47■■□□□ 1.35
CLN6-201ENST00000249806 SPIRE2Q8WWL2 714 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 ACBD3Q9H3P7 528 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.47■■□□□ 1.35
CLN6-201ENST00000249806 DAAM1Q9Y4D1 1078 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 PPP2R3BQ9Y5P8 575 aa23.47■■□□□ 1.35
CLN6-201ENST00000249806 BUB1BO60566 1050 aaPredicted RBP23.46■■□□□ 1.35
CLN6-201ENST00000249806 DGAT1O75907 488 aa23.46■■□□□ 1.35
CLN6-201ENST00000249806 SYF2O95926 243 aaKnown RBP23.46■■□□□ 1.35
CLN6-201ENST00000249806 FAM193AP78312 1265 aa23.46■■□□□ 1.35
CLN6-201ENST00000249806 FMNL3Q8IVF7 1028 aa23.46■■□□□ 1.35
CLN6-201ENST00000249806 CTNNBL1Q8WYA6 563 aaPredicted RBP23.46■■□□□ 1.35
CLN6-201ENST00000249806 RIN2Q8WYP3 895 aaPredicted RBP23.46■■□□□ 1.35
CLN6-201ENST00000249806 RUBCNQ92622 972 aa23.46■■□□□ 1.35
CLN6-201ENST00000249806 ELMO3Q96BJ8 720 aa23.46■■□□□ 1.35
CLN6-201ENST00000249806 TOPORSQ9NS56 1045 aaPredicted RBP23.46■■□□□ 1.35
CLN6-201ENST00000249806 SNCAIPQ9Y6H5 919 aa23.46■■□□□ 1.35
CLN6-201ENST00000249806 ESYT3A0FGR9 886 aa23.45■■□□□ 1.35
CLN6-201ENST00000249806 CES2O00748 559 aa23.45■■□□□ 1.35
CLN6-201ENST00000249806 CYP2C19P33261 490 aa23.45■■□□□ 1.35
CLN6-201ENST00000249806 MTERF2Q49AM1 385 aa23.45■■□□□ 1.35
CLN6-201ENST00000249806 RFFLQ8WZ73 363 aa23.45■■□□□ 1.35
CLN6-201ENST00000249806 POMGNT1Q8WZA1 660 aa23.45■■□□□ 1.35
CLN6-201ENST00000249806 PBKQ96KB5 322 aa23.45■■□□□ 1.35
CLN6-201ENST00000249806 C17orf75Q9HAS0 396 aa23.45■■□□□ 1.35
CLN6-201ENST00000249806 ACP6Q9NPH0 428 aa23.45■■□□□ 1.35
CLN6-201ENST00000249806 DKC1O60832 514 aaKnown RBP eCLIP23.45■■□□□ 1.34
CLN6-201ENST00000249806 SH3D19Q5HYK7 790 aa23.45■■□□□ 1.34
CLN6-201ENST00000249806 KLHL7Q8IXQ5 586 aa23.45■■□□□ 1.34
CLN6-201ENST00000249806 ANKRD35Q8N283 1001 aa23.45■■□□□ 1.34
CLN6-201ENST00000249806 PPM1KQ8N3J5 372 aa23.45■■□□□ 1.34
CLN6-201ENST00000249806 HVCN1Q96D96 273 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms