RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 NR2E1Q9Y466 385 aa18.81■□□□□ 0.6
LRFN3-201ENST00000246529 FER1L6Q2WGJ9 1857 aa18.81■□□□□ 0.6
LRFN3-201ENST00000246529 ZNF280AP59817 542 aaPredicted RBP18.81■□□□□ 0.6
LRFN3-201ENST00000246529 MAP2K1Q02750 393 aaPredicted RBP18.81■□□□□ 0.6
LRFN3-201ENST00000246529 PPATQ06203 517 aa18.81■□□□□ 0.6
LRFN3-201ENST00000246529 NNTQ13423 1086 aa18.81■□□□□ 0.6
LRFN3-201ENST00000246529 HLTFQ14527 1009 aaKnown RBP eCLIP18.81■□□□□ 0.6
LRFN3-201ENST00000246529 ALS2CLQ60I27 953 aa18.81■□□□□ 0.6
LRFN3-201ENST00000246529 KCTD16Q68DU8 428 aa18.81■□□□□ 0.6
LRFN3-201ENST00000246529 ADAT2Q7Z6V5 191 aaKnown RBP18.81■□□□□ 0.6
LRFN3-201ENST00000246529 SH2D3CQ8N5H7 860 aa18.81■□□□□ 0.6
LRFN3-201ENST00000246529 AMACRQ9UHK6 382 aa18.81■□□□□ 0.6
LRFN3-201ENST00000246529 GJA3Q9Y6H8 435 aa18.81■□□□□ 0.6
LRFN3-201ENST00000246529 ATP8B3O60423 1300 aa18.81■□□□□ 0.6
LRFN3-201ENST00000246529 WDR64B1ANS9 1081 aa18.8■□□□□ 0.6
LRFN3-201ENST00000246529 ECHS1P30084 290 aa18.8■□□□□ 0.6
LRFN3-201ENST00000246529 GMPSP49915 693 aaPredicted RBP18.8■□□□□ 0.6
LRFN3-201ENST00000246529 NCKAP1LP55160 1127 aa18.8■□□□□ 0.6
LRFN3-201ENST00000246529 ALCAMQ13740 583 aa18.8■□□□□ 0.6
LRFN3-201ENST00000246529 SKIDA1Q1XH10 827 aa18.8■□□□□ 0.6
LRFN3-201ENST00000246529 TTC19Q6DKK2 380 aaPredicted RBP18.8■□□□□ 0.6
LRFN3-201ENST00000246529 RASGEF1CQ8N431 466 aa18.8■□□□□ 0.6
LRFN3-201ENST00000246529 BSNDQ8WZ55 320 aa18.8■□□□□ 0.6
LRFN3-201ENST00000246529 DDX3YO15523 660 aaKnown RBP18.8■□□□□ 0.6
LRFN3-201ENST00000246529 SGPL1O95470 568 aa18.8■□□□□ 0.6
LRFN3-201ENST00000246529 CCDC172P0C7W6 258 aa18.8■□□□□ 0.6
LRFN3-201ENST00000246529 COPB2P35606 906 aa18.8■□□□□ 0.6
LRFN3-201ENST00000246529 ZNF211Q13398 564 aaPredicted RBP18.8■□□□□ 0.6
LRFN3-201ENST00000246529 PRPF4BQ13523 1007 aaKnown RBP18.8■□□□□ 0.6
LRFN3-201ENST00000246529 DALRD3Q5D0E6 543 aaKnown RBP18.8■□□□□ 0.6
LRFN3-201ENST00000246529 C12orf56Q8IXR9 622 aa18.8■□□□□ 0.6
LRFN3-201ENST00000246529 RPUSD2Q8IZ73 545 aaKnown RBP18.8■□□□□ 0.6
LRFN3-201ENST00000246529 SEMA4DQ92854 862 aa18.8■□□□□ 0.6
LRFN3-201ENST00000246529 FAM84AQ96KN4 292 aa18.8■□□□□ 0.6
LRFN3-201ENST00000246529 CELF4Q9BZC1 486 aaKnown RBP18.8■□□□□ 0.6
LRFN3-201ENST00000246529 NEUROG2Q9H2A3 272 aa18.8■□□□□ 0.6
LRFN3-201ENST00000246529 ZNF233A6NK53 670 aa18.79■□□□□ 0.6
LRFN3-201ENST00000246529 GOLGA8KD6RF30 607 aa18.79■□□□□ 0.6
LRFN3-201ENST00000246529 OPA1O60313 960 aa18.79■□□□□ 0.6
LRFN3-201ENST00000246529 FGGP02679 453 aa18.79■□□□□ 0.6
LRFN3-201ENST00000246529 NPTX2P47972 431 aa18.79■□□□□ 0.6
LRFN3-201ENST00000246529 MXI1P50539 228 aa18.79■□□□□ 0.6
LRFN3-201ENST00000246529 CFAP58Q5T655 872 aa18.79■□□□□ 0.6
LRFN3-201ENST00000246529 IQCKQ8N0W5 287 aa18.79■□□□□ 0.6
LRFN3-201ENST00000246529 TMEM161BQ8NDZ6 487 aa18.79■□□□□ 0.6
LRFN3-201ENST00000246529 TAF1DQ9H5J8 278 aaPredicted RBP18.79■□□□□ 0.6
LRFN3-201ENST00000246529 TOPORSQ9NS56 1045 aaPredicted RBP18.79■□□□□ 0.6
LRFN3-201ENST00000246529 TBX20Q9UMR3 447 aa18.79■□□□□ 0.6
LRFN3-201ENST00000246529 FTLP02792 175 aaPredicted RBP18.79■□□□□ 0.6
LRFN3-201ENST00000246529 JAK3P52333 1124 aa18.79■□□□□ 0.6
LRFN3-201ENST00000246529 CETN1Q12798 172 aa18.79■□□□□ 0.6
LRFN3-201ENST00000246529 RABEP2Q9H5N1 569 aa18.79■□□□□ 0.6
LRFN3-201ENST00000246529 GABBR1Q9UBS5 961 aa18.79■□□□□ 0.6
LRFN3-201ENST00000246529 ANKRD62A6NC57 917 aa18.78■□□□□ 0.6
LRFN3-201ENST00000246529 ZNF862O60290 1169 aa18.78■□□□□ 0.6
LRFN3-201ENST00000246529 SNRNP35Q16560 246 aaKnown RBP18.78■□□□□ 0.6
LRFN3-201ENST00000246529 SNRNP48Q6IEG0 339 aaKnown RBP18.78■□□□□ 0.6
LRFN3-201ENST00000246529 AADACL2Q6P093 401 aa18.78■□□□□ 0.6
LRFN3-201ENST00000246529 CALR3Q96L12 384 aaKnown RBP18.78■□□□□ 0.6
LRFN3-201ENST00000246529 KREMEN1Q96MU8 473 aa18.78■□□□□ 0.6
LRFN3-201ENST00000246529 PCDHB18PQ96TA0 734 aa18.78■□□□□ 0.6
LRFN3-201ENST00000246529 ISCUQ9H1K1 167 aa18.78■□□□□ 0.6
LRFN3-201ENST00000246529 TMOD4Q9NZQ9 345 aa18.78■□□□□ 0.6
LRFN3-201ENST00000246529 DENND3A2RUS2 1198 aa18.78■□□□□ 0.6
LRFN3-201ENST00000246529 TMEM110-MUSTN1A8MSY1 372 aa18.78■□□□□ 0.6
LRFN3-201ENST00000246529 TTI1O43156 1089 aa18.78■□□□□ 0.6
LRFN3-201ENST00000246529 ATMINO43313 823 aaPredicted RBP18.78■□□□□ 0.6
LRFN3-201ENST00000246529 NR3C2P08235 984 aa18.78■□□□□ 0.6
LRFN3-201ENST00000246529 HMGCS2P54868 508 aa18.78■□□□□ 0.6
LRFN3-201ENST00000246529 KRT76Q01546 638 aa18.78■□□□□ 0.6
LRFN3-201ENST00000246529 PPM1KQ8N3J5 372 aa18.78■□□□□ 0.6
LRFN3-201ENST00000246529 ST6GALNAC4Q9H4F1 302 aa18.78■□□□□ 0.6
LRFN3-201ENST00000246529 MAP3K20Q9NYL2 800 aaKnown RBP18.78■□□□□ 0.6
LRFN3-201ENST00000246529 BACE1P56817 501 aa18.77■□□□□ 0.6
LRFN3-201ENST00000246529 PPFIA1Q13136 1202 aa18.77■□□□□ 0.6
LRFN3-201ENST00000246529 NOP9Q86U38 636 aaKnown RBP18.77■□□□□ 0.6
LRFN3-201ENST00000246529 NLRX1Q86UT6 975 aa18.77■□□□□ 0.6
LRFN3-201ENST00000246529 VSIG10LQ86VR7 867 aa18.77■□□□□ 0.6
LRFN3-201ENST00000246529 ALG3Q92685 438 aa18.77■□□□□ 0.6
LRFN3-201ENST00000246529 CEP170P1Q96L14 293 aa18.77■□□□□ 0.6
LRFN3-201ENST00000246529 MOV10L1Q9BXT6 1211 aaKnown RBP18.77■□□□□ 0.6
LRFN3-201ENST00000246529 LCMT1Q9UIC8 334 aa18.77■□□□□ 0.6
LRFN3-201ENST00000246529 CNOT7Q9UIV1 285 aaKnown RBP18.77■□□□□ 0.6
LRFN3-201ENST00000246529 CYP26A1O43174 497 aa18.77■□□□□ 0.6
LRFN3-201ENST00000246529 DAPK3O43293 454 aa18.77■□□□□ 0.6
LRFN3-201ENST00000246529 RPS6KA5O75582 802 aa18.77■□□□□ 0.6
LRFN3-201ENST00000246529 RGS20O76081 388 aa18.77■□□□□ 0.6
LRFN3-201ENST00000246529 CHRNB2P17787 502 aa18.77■□□□□ 0.6
LRFN3-201ENST00000246529 RFX1P22670 979 aa18.77■□□□□ 0.6
LRFN3-201ENST00000246529 CNGA1P29973 690 aa18.77■□□□□ 0.6
LRFN3-201ENST00000246529 SFNP31947 248 aa18.77■□□□□ 0.6
LRFN3-201ENST00000246529 FLT3P36888 993 aa18.77■□□□□ 0.6
LRFN3-201ENST00000246529 SLC39A4Q6P5W5 647 aa18.77■□□□□ 0.6
LRFN3-201ENST00000246529 SLC47A2Q86VL8 602 aa18.77■□□□□ 0.6
LRFN3-201ENST00000246529 WHAMMQ8TF30 809 aa18.77■□□□□ 0.6
LRFN3-201ENST00000246529 WRNIP1Q96S55 665 aa18.77■□□□□ 0.6
LRFN3-201ENST00000246529 CTTNBP2NLQ9P2B4 639 aa18.77■□□□□ 0.6
LRFN3-201ENST00000246529 PFASO15067 1338 aa18.77■□□□□ 0.59
LRFN3-201ENST00000246529 ADGRA3Q8IWK6 1321 aa18.77■□□□□ 0.59
LRFN3-201ENST00000246529 KMT5AQ9NQR1 393 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms