RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 KCNMA1Q12791 1236 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 MKRN3Q13064 507 aaKnown RBP12.38□□□□□ -0.43
SOX9-201ENST00000245479 CENPPQ6IPU0 288 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 ARHGEF18Q6ZSZ5 1173 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 CEP120Q8N960 986 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 LRRC8CQ8TDW0 803 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 AKT1S1Q96B36 256 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 PARVGQ9HBI0 331 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 INTUQ9ULD6 942 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 IPO5O00410 1097 aaKnown RBP12.38□□□□□ -0.43
SOX9-201ENST00000245479 IGF2BP3O00425 579 aaKnown RBP eCLIP12.38□□□□□ -0.436e-7■■■□□ 16.6
SOX9-201ENST00000245479 CCND1P24385 295 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 PMS2P54278 862 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 BYSLQ13895 437 aaKnown RBP12.38□□□□□ -0.43
SOX9-201ENST00000245479 CLUL1Q15846 466 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 CFAP157Q5JU67 520 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 KAT5Q92993 513 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 CAVIN3Q969G5 261 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 WDR11Q9BZH6 1224 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 RIOX1Q9H6W3 641 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 BZW2Q9Y6E2 419 aaKnown RBP12.38□□□□□ -0.43
SOX9-201ENST00000245479 KDM3AQ9Y4C1 1321 aa12.38□□□□□ -0.43
SOX9-201ENST00000245479 SLFN12Q8IYM2 578 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 CCDC17Q96LX7 622 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 NUDCD1Q96RS6 583 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 MYH10P35580 1976 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 PASKQ96RG2 1323 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 TCP11X1B4DZS4 312 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 OPLAHO14841 1288 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 ATRNO75882 1429 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 IFNB1P01574 187 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 ADCY8P40145 1251 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 CREG2Q8IUH2 290 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 PDCD7Q8N8D1 485 aaKnown RBP12.37□□□□□ -0.43
SOX9-201ENST00000245479 PPP1R13LQ8WUF5 828 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 POMGNT1Q8WZA1 660 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 CNKSR1Q969H4 720 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.37□□□□□ -0.433e-12■■□□□ 11.7
SOX9-201ENST00000245479 ZNF408Q9H9D4 720 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 VPS37BQ9H9H4 285 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 LARSQ9P2J5 1176 aaKnown RBP12.37□□□□□ -0.43
SOX9-201ENST00000245479 PVALEFA0A1B0GWK0 134 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 LRRC10BA6NIK2 292 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 NFIBO00712 420 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 MTERF2Q49AM1 385 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 ARHGEF16Q5VV41 709 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 TMEM179Q6ZVK1 233 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 ZNF571Q7Z3V5 609 aaPredicted RBP12.37□□□□□ -0.43
SOX9-201ENST00000245479 LDHDQ86WU2 507 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 TMBIM4Q9HC24 238 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 CENPFP49454 3210 aa12.37□□□□□ -0.43
SOX9-201ENST00000245479 HNRNPDLO14979 420 aaKnown RBP12.36□□□□□ -0.43
SOX9-201ENST00000245479 CD58P19256 250 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 CTCFP49711 727 aaPredicted RBP12.36□□□□□ -0.43
SOX9-201ENST00000245479 MYL7Q01449 175 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 AGBL2Q5U5Z8 902 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 KCNV1Q6PIU1 500 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 YTHDF3Q7Z739 585 aaKnown RBP12.36□□□□□ -0.43
SOX9-201ENST00000245479 ZSWIM2Q8NEG5 633 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 DNAJC18Q9H819 358 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 FAM198AQ9UFP1 575 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 LRRIQ4A6NIV6 560 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 POC1B-GALNT4F8VUJ3 575 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 POLD1P28340 1107 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 CYP4F22Q6NT55 531 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 PADI6Q6TGC4 694 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 RNF168Q8IYW5 571 aaPredicted RBP12.36□□□□□ -0.43
SOX9-201ENST00000245479 LRRC34Q8IZ02 419 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 DDX27Q96GQ7 796 aaKnown RBP12.36□□□□□ -0.43
SOX9-201ENST00000245479 MTMR9Q96QG7 549 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 ISCUQ9H1K1 167 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 CEP72Q9P209 647 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 GALCP54803 685 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 IGBP1P78318 339 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 SH2D4BQ5SQS7 431 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 SPATA24Q86W54 205 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 FBXO41Q8TF61 875 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.36□□□□□ -0.436e-6■□□□□ 8.8
SOX9-201ENST00000245479 CBWD1Q9BRT8 395 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 TLR10Q9BXR5 811 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 TOPORSQ9NS56 1045 aaPredicted RBP12.36□□□□□ -0.43
SOX9-201ENST00000245479 MCM8Q9UJA3 840 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 EMSYQ7Z589 1322 aa12.36□□□□□ -0.43
SOX9-201ENST00000245479 AGPSO00116 658 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 SHOX2O60902 331 aaPredicted RBP12.35□□□□□ -0.43
SOX9-201ENST00000245479 SNUPNO95149 360 aaKnown RBP12.35□□□□□ -0.43
SOX9-201ENST00000245479 KLC1Q07866 573 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 ZBTB33Q86T24 672 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 USP15Q9Y4E8 981 aaPredicted RBP12.35□□□□□ -0.43
SOX9-201ENST00000245479 ZNF233A6NK53 670 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 CYP26A1O43174 497 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 PRLRP16471 622 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 PSMC2P35998 433 aaKnown RBP12.35□□□□□ -0.43
SOX9-201ENST00000245479 STRN3Q13033 797 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 GIT2Q14161 759 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 DBN1Q16643 649 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 PODNQ7Z5L7 613 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 USP38Q8NB14 1042 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 RAB3IL1Q8TBN0 382 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 SLC20A1Q8WUM9 679 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms