RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 A0A087X0B3 334 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 A0A1B0GUA9 196 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 B4GALT5O43286 388 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 PRKCBP05771 671 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 RB1P06400 928 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 FGFR1P11362 822 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 PLS3P13797 630 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 FOSL2P15408 326 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 NCLP19338 710 aaKnown RBP11.73□□□□□ -0.53
PFDN5-201ENST00000243040 NPTX2P47972 431 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 GATMP50440 423 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 ZNF131P52739 623 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 PEX3P56589 373 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 KRT85P78386 507 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 NUCB2P80303 420 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 NCBP1Q09161 790 aaKnown RBP11.73□□□□□ -0.53
PFDN5-201ENST00000243040 FOXD4L6Q3SYB3 417 aaPredicted RBP11.73□□□□□ -0.53
PFDN5-201ENST00000243040 PAN2Q504Q3 1202 aaKnown RBP11.73□□□□□ -0.53
PFDN5-201ENST00000243040 EPC2Q52LR7 807 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 CLLU1OSQ5K130 101 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 RRAGBQ5VZM2 374 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 FOXD4L3Q6VB84 417 aaPredicted RBP11.73□□□□□ -0.53
PFDN5-201ENST00000243040 MRPL10Q7Z7H8 261 aaKnown RBP11.73□□□□□ -0.53
PFDN5-201ENST00000243040 GPBP1Q86WP2 473 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 TMEM192Q8IY95 271 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 CNNM3Q8NE01 707 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 SPIRE2Q8WWL2 714 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 CPB2Q96IY4 423 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 CASD1Q96PB1 797 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 REEP2Q9BRK0 252 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 NTPCRQ9BSD7 190 aaKnown RBP11.73□□□□□ -0.53
PFDN5-201ENST00000243040 KIFC3Q9BVG8 833 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 TMEM134Q9H6X4 195 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 CERS4Q9HA82 394 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 POLD4Q9HCU8 107 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 ZMYM2Q9UBW7 1377 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 KCNG1Q9UIX4 513 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 RCOR1Q9UKL0 485 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 PCDHB2Q9Y5E7 798 aa11.73□□□□□ -0.53
PFDN5-201ENST00000243040 MRPL42Q9Y6G3 142 aaKnown RBP11.73□□□□□ -0.53
PFDN5-201ENST00000243040 CITO14578 2027 aa11.72□□□□□ -0.53
PFDN5-201ENST00000243040 PDCD11Q14690 1871 aaKnown RBP11.72□□□□□ -0.53
PFDN5-201ENST00000243040 TBKBP1A7MCY6 615 aa11.72□□□□□ -0.53
PFDN5-201ENST00000243040 ACKR2O00590 384 aa11.72□□□□□ -0.53
PFDN5-201ENST00000243040 LPXNO60711 386 aa11.72□□□□□ -0.53
PFDN5-201ENST00000243040 EDN1P05305 212 aa11.72□□□□□ -0.53
PFDN5-201ENST00000243040 IBSPP21815 317 aaPredicted RBP11.72□□□□□ -0.53
PFDN5-201ENST00000243040 CTNNB1P35222 781 aa11.72□□□□□ -0.53
PFDN5-201ENST00000243040 STAT6P42226 847 aa11.72□□□□□ -0.53
PFDN5-201ENST00000243040 NCKAP1LP55160 1127 aa11.72□□□□□ -0.53
PFDN5-201ENST00000243040 GIT2Q14161 759 aa11.72□□□□□ -0.53
PFDN5-201ENST00000243040 ADGRE1Q14246 886 aa11.72□□□□□ -0.53
PFDN5-201ENST00000243040 SLC27A1Q6PCB7 646 aa11.72□□□□□ -0.53
PFDN5-201ENST00000243040 SHC4Q6S5L8 630 aa11.72□□□□□ -0.53
PFDN5-201ENST00000243040 ABI1Q8IZP0 508 aa11.72□□□□□ -0.53
PFDN5-201ENST00000243040 LRRC43Q8N309 656 aa11.72□□□□□ -0.53
PFDN5-201ENST00000243040 FBXO22Q8NEZ5 403 aa11.72□□□□□ -0.53
PFDN5-201ENST00000243040 GDPD5Q8WTR4 605 aa11.72□□□□□ -0.53
PFDN5-201ENST00000243040 P2RX5Q93086 422 aa11.72□□□□□ -0.53
PFDN5-201ENST00000243040 PGBD4Q96DM1 585 aa11.72□□□□□ -0.53
PFDN5-201ENST00000243040 PLVAPQ9BX97 442 aa11.72□□□□□ -0.53
PFDN5-201ENST00000243040 MRPL9Q9BYD2 267 aaKnown RBP11.72□□□□□ -0.53
PFDN5-201ENST00000243040 CWH43Q9H720 699 aa11.72□□□□□ -0.53
PFDN5-201ENST00000243040 KMT5AQ9NQR1 393 aa11.72□□□□□ -0.53
PFDN5-201ENST00000243040 LMCD1Q9NZU5 365 aa11.72□□□□□ -0.53
PFDN5-201ENST00000243040 LARSQ9P2J5 1176 aaKnown RBP11.72□□□□□ -0.53
PFDN5-201ENST00000243040 PCDHA7Q9UN72 937 aa11.72□□□□□ -0.53
PFDN5-201ENST00000243040 RBM19Q9Y4C8 960 aaKnown RBP11.72□□□□□ -0.53
PFDN5-201ENST00000243040 TRIP11Q15643 1979 aa11.71□□□□□ -0.53
PFDN5-201ENST00000243040 NPHP3-ACAD11A0A0J9YXS1 232 aa11.71□□□□□ -0.53
PFDN5-201ENST00000243040 CCDC169A6NNP5 214 aa11.71□□□□□ -0.53
PFDN5-201ENST00000243040 H3BNC9 293 aa11.71□□□□□ -0.53
PFDN5-201ENST00000243040 N4BP3O15049 544 aa11.71□□□□□ -0.53
PFDN5-201ENST00000243040 INPPL1O15357 1258 aa11.71□□□□□ -0.53
PFDN5-201ENST00000243040 SCP2P22307 547 aa11.71□□□□□ -0.53
PFDN5-201ENST00000243040 BMPR1AP36894 532 aa11.71□□□□□ -0.53
PFDN5-201ENST00000243040 ME1P48163 572 aa11.71□□□□□ -0.53
PFDN5-201ENST00000243040 CACNB1Q02641 598 aaPredicted RBP11.71□□□□□ -0.53
PFDN5-201ENST00000243040 RAD51AP2Q09MP3 1159 aa11.71□□□□□ -0.53
PFDN5-201ENST00000243040 PRPF4BQ13523 1007 aaKnown RBP11.71□□□□□ -0.53
PFDN5-201ENST00000243040 DHX8Q14562 1220 aaKnown RBP11.71□□□□□ -0.53
PFDN5-201ENST00000243040 E2F4Q16254 413 aa11.71□□□□□ -0.53
PFDN5-201ENST00000243040 RESP18Q5W5W9 173 aa11.71□□□□□ -0.53
PFDN5-201ENST00000243040 AGMOQ6ZNB7 445 aa11.71□□□□□ -0.53
PFDN5-201ENST00000243040 TAS1R3Q7RTX0 852 aa11.71□□□□□ -0.53
PFDN5-201ENST00000243040 RNF169Q8NCN4 708 aa11.71□□□□□ -0.53
PFDN5-201ENST00000243040 SMG8Q8ND04 991 aaKnown RBP11.71□□□□□ -0.53
PFDN5-201ENST00000243040 TMEM161BQ8NDZ6 487 aa11.71□□□□□ -0.53
PFDN5-201ENST00000243040 LEO1Q8WVC0 666 aaPredicted RBP11.71□□□□□ -0.53
PFDN5-201ENST00000243040 C11orf84Q9BUA3 381 aaPredicted RBP11.71□□□□□ -0.53
PFDN5-201ENST00000243040 EIF2AQ9BY44 585 aaKnown RBP11.71□□□□□ -0.53
PFDN5-201ENST00000243040 CUEDC2Q9H467 287 aa11.71□□□□□ -0.53
PFDN5-201ENST00000243040 PDZD7Q9H5P4 517 aa11.71□□□□□ -0.53
PFDN5-201ENST00000243040 PARVGQ9HBI0 331 aa11.71□□□□□ -0.53
PFDN5-201ENST00000243040 UBN1Q9NPG3 1134 aa11.71□□□□□ -0.53
PFDN5-201ENST00000243040 MTUS1Q9ULD2 1270 aa11.71□□□□□ -0.53
PFDN5-201ENST00000243040 IPPQ9Y573 584 aa11.71□□□□□ -0.53
PFDN5-201ENST00000243040 REV3LO60673 3130 aa11.71□□□□□ -0.53
PFDN5-201ENST00000243040 PRRC2BQ5JSZ5 2229 aaKnown RBP11.7□□□□□ -0.54
PFDN5-201ENST00000243040 TTLL13PA6NNM8 815 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms