RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 TOP1P11387 765 aaKnown RBP8.85□□□□□ -0.99
CXCR4-201ENST00000241393 HIBADHP31937 336 aaKnown RBP8.85□□□□□ -0.99
CXCR4-201ENST00000241393 PLCD1P51178 756 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 CLCN7P51798 805 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 TBX2Q13207 712 aaPredicted RBP8.85□□□□□ -0.99
CXCR4-201ENST00000241393 C2orf27AQ580R0 203 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 CCDC178Q5BJE1 867 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 FAM214BQ7L5A3 538 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 BVESQ8NE79 360 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 CTCFLQ8NI51 663 aaPredicted RBP8.85□□□□□ -0.99
CXCR4-201ENST00000241393 SPOCK3Q9BQ16 436 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 CABP5Q9NP86 173 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 FANCLQ9NW38 375 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 PFDN2Q9UHV9 154 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 CAPN6Q9Y6Q1 641 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 KIAA1551Q9HCM1 1747 aa8.84□□□□□ -0.99
CXCR4-201ENST00000241393 LAMB1P07942 1786 aa8.84□□□□□ -0.99
CXCR4-201ENST00000241393 PHLPP2Q6ZVD8 1323 aa8.84□□□□□ -0.99
CXCR4-201ENST00000241393 CYP26A1O43174 497 aa8.84□□□□□ -0.99
CXCR4-201ENST00000241393 ARHGAP6O43182 974 aa8.84□□□□□ -0.99
CXCR4-201ENST00000241393 ZSCAN12O43309 604 aa8.84□□□□□ -0.99
CXCR4-201ENST00000241393 SLU7O95391 586 aaKnown RBP8.84□□□□□ -0.99
CXCR4-201ENST00000241393 ENDOUP21128 410 aaKnown RBP8.84□□□□□ -0.99
CXCR4-201ENST00000241393 KIF5BP33176 963 aa8.84□□□□□ -0.99
CXCR4-201ENST00000241393 CERS3Q8IU89 383 aa8.84□□□□□ -0.99
CXCR4-201ENST00000241393 SYNPOQ8N3V7 929 aa8.84□□□□□ -0.99
CXCR4-201ENST00000241393 LRRN4CLQ8ND94 238 aa8.84□□□□□ -0.99
CXCR4-201ENST00000241393 ZNF384Q8TF68 577 aa8.84□□□□□ -0.99
CXCR4-201ENST00000241393 ANKS1AQ92625 1134 aa8.84□□□□□ -0.99
CXCR4-201ENST00000241393 CELF1Q92879 486 aaKnown RBP8.84□□□□□ -0.99
CXCR4-201ENST00000241393 FGD4Q96M96 766 aa8.84□□□□□ -0.99
CXCR4-201ENST00000241393 GSDMAQ96QA5 445 aa8.84□□□□□ -0.99
CXCR4-201ENST00000241393 PRDM14Q9GZV8 571 aa8.84□□□□□ -0.99
CXCR4-201ENST00000241393 CSRNP2Q9H175 543 aa8.84□□□□□ -0.99
CXCR4-201ENST00000241393 DCP1AQ9NPI6 582 aaPredicted RBP8.84□□□□□ -0.99
CXCR4-201ENST00000241393 CHST7Q9NS84 486 aa8.84□□□□□ -0.99
CXCR4-201ENST00000241393 TRMT1Q9NXH9 659 aaKnown RBP8.84□□□□□ -0.99
CXCR4-201ENST00000241393 PIM2Q9P1W9 311 aa8.84□□□□□ -0.99
CXCR4-201ENST00000241393 AKT3Q9Y243 479 aa8.84□□□□□ -0.99
CXCR4-201ENST00000241393 SNX11Q9Y5W9 270 aa8.84□□□□□ -0.99
CXCR4-201ENST00000241393 CASZ1Q86V15 1759 aa8.83□□□□□ -1
CXCR4-201ENST00000241393 STX10O60499 249 aa8.83□□□□□ -1
CXCR4-201ENST00000241393 HSD3B2P26439 372 aa8.83□□□□□ -1
CXCR4-201ENST00000241393 CALML3P27482 149 aa8.83□□□□□ -1
CXCR4-201ENST00000241393 GRIK1P39086 918 aa8.83□□□□□ -1
CXCR4-201ENST00000241393 DYNLL1P63167 89 aaKnown RBP8.83□□□□□ -1
CXCR4-201ENST00000241393 ATP2C1P98194 919 aaPredicted RBP8.83□□□□□ -1
CXCR4-201ENST00000241393 MECOMQ03112 1051 aa8.83□□□□□ -1
CXCR4-201ENST00000241393 GRIN1Q05586 938 aa8.83□□□□□ -1
CXCR4-201ENST00000241393 GRB10Q13322 594 aa8.83□□□□□ -1
CXCR4-201ENST00000241393 NPY5RQ15761 445 aa8.83□□□□□ -1
CXCR4-201ENST00000241393 TTC38Q5R3I4 469 aa8.83□□□□□ -1
CXCR4-201ENST00000241393 TBC1D9BQ66K14 1250 aa8.83□□□□□ -1
CXCR4-201ENST00000241393 ISM2Q6H9L7 571 aa8.83□□□□□ -1
CXCR4-201ENST00000241393 THAP5Q7Z6K1 395 aa8.83□□□□□ -1
CXCR4-201ENST00000241393 SH3TC2Q8TF17 1288 aa8.83□□□□□ -1
CXCR4-201ENST00000241393 DPF2Q92785 391 aa8.83□□□□□ -1
CXCR4-201ENST00000241393 HEXIM2Q96MH2 286 aaKnown RBP8.83□□□□□ -1
CXCR4-201ENST00000241393 GPR62Q9BZJ7 368 aa8.83□□□□□ -1
CXCR4-201ENST00000241393 LRRC4CQ9HCJ2 640 aa8.83□□□□□ -1
CXCR4-201ENST00000241393 SH3GLB2Q9NR46 395 aa8.83□□□□□ -1
CXCR4-201ENST00000241393 VPS54Q9P1Q0 977 aa8.83□□□□□ -1
CXCR4-201ENST00000241393 NFE2L3Q9Y4A8 694 aa8.83□□□□□ -1
CXCR4-201ENST00000241393 MYH2Q9UKX2 1941 aa8.83□□□□□ -1
CXCR4-201ENST00000241393 ROBO3Q96MS0 1386 aa8.82□□□□□ -1
CXCR4-201ENST00000241393 MYH13Q9UKX3 1938 aa8.82□□□□□ -1
CXCR4-201ENST00000241393 TMEM265A0A087WTH1 108 aa8.82□□□□□ -1
CXCR4-201ENST00000241393 FOXN1O15353 648 aa8.82□□□□□ -1
CXCR4-201ENST00000241393 KCNQ2O43526 872 aa8.82□□□□□ -1
CXCR4-201ENST00000241393 PLEKHA8P1O95397 391 aa8.82□□□□□ -1
CXCR4-201ENST00000241393 GSNP06396 782 aa8.82□□□□□ -1
CXCR4-201ENST00000241393 SCG2P13521 617 aa8.82□□□□□ -1
CXCR4-201ENST00000241393 GNAQP50148 359 aa8.82□□□□□ -1
CXCR4-201ENST00000241393 VPS72Q15906 364 aa8.82□□□□□ -1
CXCR4-201ENST00000241393 IFI16Q16666 785 aaKnown RBP8.82□□□□□ -1
CXCR4-201ENST00000241393 PFKFB3Q16875 520 aaPredicted RBP8.82□□□□□ -1
CXCR4-201ENST00000241393 CCDC93Q567U6 631 aa8.82□□□□□ -1
CXCR4-201ENST00000241393 SPATA1Q5VX52 437 aa8.82□□□□□ -1
CXCR4-201ENST00000241393 ARL6IP4Q66PJ3 421 aaKnown RBP8.82□□□□□ -1
CXCR4-201ENST00000241393 SPECC1LQ69YQ0 1117 aa8.82□□□□□ -1
CXCR4-201ENST00000241393 DGKHQ86XP1 1220 aa8.82□□□□□ -1
CXCR4-201ENST00000241393 ZNF655Q8N720 491 aaPredicted RBP8.82□□□□□ -1
CXCR4-201ENST00000241393 ZNF397Q8NF99 534 aaPredicted RBP8.82□□□□□ -1
CXCR4-201ENST00000241393 SHISA4Q96DD7 197 aa8.82□□□□□ -1
CXCR4-201ENST00000241393 CCDC140Q96MF4 163 aa8.82□□□□□ -1
CXCR4-201ENST00000241393 CTAGE1Q96RT6 745 aa8.82□□□□□ -1
CXCR4-201ENST00000241393 INTS13Q9NVM9 706 aa8.82□□□□□ -1
CXCR4-201ENST00000241393 SUSD2Q9UGT4 822 aa8.82□□□□□ -1
CXCR4-201ENST00000241393 MRPL42Q9Y6G3 142 aaKnown RBP8.82□□□□□ -1
CXCR4-201ENST00000241393 IRS2Q9Y4H2 1338 aa8.82□□□□□ -1
CXCR4-201ENST00000241393 BAZ2AQ9UIF9 1905 aaKnown RBP8.82□□□□□ -1
CXCR4-201ENST00000241393 TRAV20A0A0B4J274 112 aa8.81□□□□□ -1
CXCR4-201ENST00000241393 ENPP3O14638 875 aa8.81□□□□□ -1
CXCR4-201ENST00000241393 TOM1O60784 492 aa8.81□□□□□ -1
CXCR4-201ENST00000241393 CEACAM5P06731 702 aa8.81□□□□□ -1
CXCR4-201ENST00000241393 CDK11BP21127 795 aaKnown RBP8.81□□□□□ -1
CXCR4-201ENST00000241393 NOP2P46087 812 aaKnown RBP8.81□□□□□ -1
CXCR4-201ENST00000241393 SPECC1Q5M775 1068 aa8.81□□□□□ -1
CXCR4-201ENST00000241393 GALNT17Q6IS24 598 aa8.81□□□□□ -1
CXCR4-201ENST00000241393 GPAT2Q6NUI2 795 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms