RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 ING2Q9H160 280 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 KIF17Q9P2E2 1029 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 GRID2IPA4D2P6 1211 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 MMP10P09238 476 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 GPS1Q13098 491 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 GRM4Q14833 912 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 CCNYL1Q8N7R7 359 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 PPM1NQ8N819 430 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 POLR3FQ9H1D9 316 aaPredicted RBP12.28□□□□□ -0.44
LAMA4-201ENST00000230538 DDX56Q9NY93 547 aaKnown RBP12.28□□□□□ -0.44
LAMA4-201ENST00000230538 UTYO14607 1347 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 PYGLP06737 847 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 NME3Q13232 169 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 DRAP1Q14919 205 aaPredicted RBP12.28□□□□□ -0.44
LAMA4-201ENST00000230538 EFTUD2Q15029 972 aaKnown RBP eCLIP12.28□□□□□ -0.44
LAMA4-201ENST00000230538 TBCCQ15814 346 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 ACAP3Q96P50 834 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 TDRD3Q9H7E2 651 aaKnown RBP12.28□□□□□ -0.44
LAMA4-201ENST00000230538 MLXIPLQ9NP71 852 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 STAP1Q9ULZ2 295 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 MYO3BQ8WXR4 1341 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 ECE2O60344 883 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 PRDX5P30044 214 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 SWSAP1Q6NVH7 229 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 LZICQ8WZA0 190 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 ITM2BQ9Y287 266 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 P4HBP07237 508 aaKnown RBP12.28□□□□□ -0.44
LAMA4-201ENST00000230538 LBRQ14739 615 aaKnown RBP12.28□□□□□ -0.44
LAMA4-201ENST00000230538 RBBP7Q16576 425 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 TEDDM1Q5T9Z0 273 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 ENAHQ8N8S7 591 aaPredicted RBP12.28□□□□□ -0.44
LAMA4-201ENST00000230538 CEP95Q96GE4 821 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 WRNIP1Q96S55 665 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 SP110Q9HB58 689 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 GABBR1Q9UBS5 961 aa12.28□□□□□ -0.44
LAMA4-201ENST00000230538 TRPM1Q7Z4N2 1603 aa12.27□□□□□ -0.44
LAMA4-201ENST00000230538 POTEFA5A3E0 1075 aa12.27□□□□□ -0.44
LAMA4-201ENST00000230538 KIF28PB7ZC32 967 aa12.27□□□□□ -0.44
LAMA4-201ENST00000230538 NEMP1O14524 444 aa12.27□□□□□ -0.44
LAMA4-201ENST00000230538 DIAPH2O60879 1101 aa12.27□□□□□ -0.44
LAMA4-201ENST00000230538 HAUS5O94927 633 aa12.27□□□□□ -0.44
LAMA4-201ENST00000230538 FTLP02792 175 aaPredicted RBP12.27□□□□□ -0.44
LAMA4-201ENST00000230538 KRT7P08729 469 aa12.27□□□□□ -0.44
LAMA4-201ENST00000230538 POTEIP0CG38 1075 aa12.27□□□□□ -0.44
LAMA4-201ENST00000230538 TXNRD1Q16881 649 aa12.27□□□□□ -0.44
LAMA4-201ENST00000230538 POTEGQ6S5H5 508 aa12.27□□□□□ -0.44
LAMA4-201ENST00000230538 POTEEQ6S8J3 1075 aa12.27□□□□□ -0.44
LAMA4-201ENST00000230538 BTBD6Q96KE9 485 aa12.27□□□□□ -0.44
LAMA4-201ENST00000230538 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.27□□□□□ -0.44
LAMA4-201ENST00000230538 WDR19Q8NEZ3 1342 aa12.27□□□□□ -0.44
LAMA4-201ENST00000230538 FBXW4P57775 412 aa12.27□□□□□ -0.45
LAMA4-201ENST00000230538 PPP2R2AP63151 447 aa12.27□□□□□ -0.45
LAMA4-201ENST00000230538 ORC2Q13416 577 aaPredicted RBP12.27□□□□□ -0.45
LAMA4-201ENST00000230538 TERF2Q15554 542 aa12.27□□□□□ -0.45
LAMA4-201ENST00000230538 SNF8Q96H20 258 aa12.27□□□□□ -0.45
LAMA4-201ENST00000230538 MRPL4Q9BYD3 311 aaKnown RBP12.27□□□□□ -0.45
LAMA4-201ENST00000230538 WNT8AQ9H1J5 351 aa12.27□□□□□ -0.45
LAMA4-201ENST00000230538 COG4Q9H9E3 785 aa12.27□□□□□ -0.45
LAMA4-201ENST00000230538 WARS2Q9UGM6 360 aaKnown RBP12.27□□□□□ -0.45
LAMA4-201ENST00000230538 MINPP1Q9UNW1 487 aa12.27□□□□□ -0.45
LAMA4-201ENST00000230538 MBD5Q9P267 1494 aa12.27□□□□□ -0.45
LAMA4-201ENST00000230538 PP2D1A8MPX8 630 aa12.27□□□□□ -0.45
LAMA4-201ENST00000230538 ADORA2BP29275 332 aa12.27□□□□□ -0.45
LAMA4-201ENST00000230538 CHRNA3P32297 505 aa12.27□□□□□ -0.45
LAMA4-201ENST00000230538 QARSP47897 775 aaKnown RBP12.27□□□□□ -0.45
LAMA4-201ENST00000230538 FASTKD5Q7L8L6 764 aaKnown RBP12.27□□□□□ -0.45
LAMA4-201ENST00000230538 C2orf69Q8N8R5 385 aa12.27□□□□□ -0.45
LAMA4-201ENST00000230538 TGS1Q96RS0 853 aaKnown RBP12.27□□□□□ -0.45
LAMA4-201ENST00000230538 KRT14P02533 472 aa12.27□□□□□ -0.45
LAMA4-201ENST00000230538 OCA2Q04671 838 aa12.27□□□□□ -0.45
LAMA4-201ENST00000230538 PDIA2Q13087 525 aaKnown RBP12.27□□□□□ -0.45
LAMA4-201ENST00000230538 EFHC2Q5JST6 749 aa12.27□□□□□ -0.45
LAMA4-201ENST00000230538 CDKL3Q8IVW4 592 aaPredicted RBP12.27□□□□□ -0.45
LAMA4-201ENST00000230538 MB21D2Q8IYB1 491 aaPredicted RBP12.27□□□□□ -0.45
LAMA4-201ENST00000230538 DCTN4Q9UJW0 460 aa12.27□□□□□ -0.45
LAMA4-201ENST00000230538 SNX5Q9Y5X3 404 aa12.27□□□□□ -0.45
LAMA4-201ENST00000230538 TTLL4Q14679 1199 aa12.27□□□□□ -0.45
LAMA4-201ENST00000230538 ZNF746Q6NUN9 644 aaPredicted RBP12.27□□□□□ -0.45
LAMA4-201ENST00000230538 SYNE4Q8N205 404 aa12.27□□□□□ -0.45
LAMA4-201ENST00000230538 RNF146Q9NTX7 359 aa12.27□□□□□ -0.45
LAMA4-201ENST00000230538 ADA2Q9NZK5 511 aa12.27□□□□□ -0.45
LAMA4-201ENST00000230538 FOXN1O15353 648 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 ASAP2O43150 1006 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 TEX33O43247 280 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 ITPRIPL1Q6GPH6 555 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 TMED8Q6PL24 325 aaPredicted RBP12.26□□□□□ -0.45
LAMA4-201ENST00000230538 ZBED8Q8IZ13 594 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 ADGRF4Q8IZF3 695 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 SAAL1Q96ER3 474 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 EGFL8Q99944 293 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 NEUROG2Q9H2A3 272 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 FAM196BA6NMK8 535 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 AARSP49588 968 aaKnown RBP eCLIP12.26□□□□□ -0.45
LAMA4-201ENST00000230538 PTK2BQ14289 1009 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 LRRC23Q53EV4 343 aaPredicted RBP12.26□□□□□ -0.45
LAMA4-201ENST00000230538 KCNV2Q8TDN2 545 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 FAM217BQ9NTX9 383 aaPredicted RBP12.26□□□□□ -0.45
LAMA4-201ENST00000230538 PIM2Q9P1W9 311 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 SEL1LQ9UBV2 794 aa12.26□□□□□ -0.45
LAMA4-201ENST00000230538 TSR3Q9UJK0 312 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms