RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 XKR9Q5GH70 373 aa20.02■□□□□ 0.8
PFN1-201ENST00000225655 GLB1LQ6UWU2 654 aa20.02■□□□□ 0.8
PFN1-201ENST00000225655 TMEM184AQ6ZMB5 413 aa20.02■□□□□ 0.8
PFN1-201ENST00000225655 TPH2Q8IWU9 490 aa20.02■□□□□ 0.8
PFN1-201ENST00000225655 HSD17B14Q9BPX1 270 aa20.02■□□□□ 0.8
PFN1-201ENST00000225655 EIF2AK1Q9BQI3 630 aaKnown RBP20.02■□□□□ 0.8
PFN1-201ENST00000225655 TTC12Q9H892 705 aaPredicted RBP20.02■□□□□ 0.8
PFN1-201ENST00000225655 CIZ1Q9ULV3 898 aaPredicted RBP20.02■□□□□ 0.8
PFN1-201ENST00000225655 CARNS1A5YM72 827 aa20.01■□□□□ 0.79
PFN1-201ENST00000225655 HIDE1A8MVS5 230 aa20.01■□□□□ 0.79
PFN1-201ENST00000225655 ZBTB39O15060 712 aa20.01■□□□□ 0.79
PFN1-201ENST00000225655 BRD1O95696 1058 aa20.01■□□□□ 0.79
PFN1-201ENST00000225655 SRGAP2CP0DJJ0 459 aa20.01■□□□□ 0.79
PFN1-201ENST00000225655 SRGAP2BP0DMP2 458 aa20.01■□□□□ 0.79
PFN1-201ENST00000225655 TOB1P50616 345 aaPredicted RBP20.01■□□□□ 0.79
PFN1-201ENST00000225655 BCAR1P56945 870 aa20.01■□□□□ 0.79
PFN1-201ENST00000225655 RBM10P98175 930 aaKnown RBP20.01■□□□□ 0.79
PFN1-201ENST00000225655 LPPQ93052 612 aa20.01■□□□□ 0.79
PFN1-201ENST00000225655 PGBD4Q96DM1 585 aa20.01■□□□□ 0.79
PFN1-201ENST00000225655 MTMR9Q96QG7 549 aa20.01■□□□□ 0.79
PFN1-201ENST00000225655 MTRQ99707 1265 aa20.01■□□□□ 0.79
PFN1-201ENST00000225655 RAB34Q9BZG1 259 aa20.01■□□□□ 0.79
PFN1-201ENST00000225655 MINDY3Q9H8M7 445 aa20.01■□□□□ 0.79
PFN1-201ENST00000225655 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.01■□□□□ 0.79
PFN1-201ENST00000225655 BMP2KQ9NSY1 1161 aaPredicted RBP20.01■□□□□ 0.79
PFN1-201ENST00000225655 USP15Q9Y4E8 981 aaPredicted RBP20.01■□□□□ 0.79
PFN1-201ENST00000225655 PCDHB6Q9Y5E3 794 aa20.01■□□□□ 0.79
PFN1-201ENST00000225655 PCDHB2Q9Y5E7 798 aa20.01■□□□□ 0.79
PFN1-201ENST00000225655 PRR33A8MZF0 331 aa20■□□□□ 0.79
PFN1-201ENST00000225655 WNT7AO00755 349 aa20■□□□□ 0.79
PFN1-201ENST00000225655 MXD4Q14582 209 aaPredicted RBP20■□□□□ 0.79
PFN1-201ENST00000225655 NOMO2Q5JPE7 1267 aa20■□□□□ 0.79
PFN1-201ENST00000225655 ATL3Q6DD88 541 aa20■□□□□ 0.79
PFN1-201ENST00000225655 TMC7Q7Z402 723 aa20■□□□□ 0.79
PFN1-201ENST00000225655 RNF149Q8NC42 400 aa20■□□□□ 0.79
PFN1-201ENST00000225655 ANKEF1Q9NU02 776 aa20■□□□□ 0.79
PFN1-201ENST00000225655 TBC1D13Q9NVG8 400 aa20■□□□□ 0.79
PFN1-201ENST00000225655 HCN4Q9Y3Q4 1203 aa20■□□□□ 0.79
PFN1-201ENST00000225655 ARIH1Q9Y4X5 557 aaPredicted RBP20■□□□□ 0.79
PFN1-201ENST00000225655 MEIS3P2A8K0S8 358 aa19.99■□□□□ 0.79
PFN1-201ENST00000225655 OFD1O75665 1012 aa19.99■□□□□ 0.79
PFN1-201ENST00000225655 HOXA11P31270 313 aaPredicted RBP19.99■□□□□ 0.79
PFN1-201ENST00000225655 TXKP42681 527 aa19.99■□□□□ 0.79
PFN1-201ENST00000225655 PTGDRQ13258 359 aa19.99■□□□□ 0.79
PFN1-201ENST00000225655 NBR1Q14596 966 aa19.99■□□□□ 0.79
PFN1-201ENST00000225655 SMC1AQ14683 1233 aaKnown RBP19.99■□□□□ 0.79
PFN1-201ENST00000225655 PCBP1Q15365 356 aaKnown RBP eCLIP19.99■□□□□ 0.793e-14■■■■□ 23.2
PFN1-201ENST00000225655 LONRF3Q496Y0 759 aa19.99■□□□□ 0.79
PFN1-201ENST00000225655 MRPL43Q8N983 215 aaKnown RBP19.99■□□□□ 0.79
PFN1-201ENST00000225655 XPNPEP1Q9NQW7 623 aa19.99■□□□□ 0.79
PFN1-201ENST00000225655 CFAP45Q9UL16 551 aa19.99■□□□□ 0.79
PFN1-201ENST00000225655 C5orf42Q9H799 3197 aa19.98■□□□□ 0.79
PFN1-201ENST00000225655 ZC3H11AO75152 810 aaKnown RBP eCLIP19.98■□□□□ 0.794e-23■■□□□ 13.2
PFN1-201ENST00000225655 DGAT1O75907 488 aa19.98■□□□□ 0.79
PFN1-201ENST00000225655 PRPHP41219 470 aa19.98■□□□□ 0.79
PFN1-201ENST00000225655 POU5F1BQ06416 359 aa19.98■□□□□ 0.79
PFN1-201ENST00000225655 PKP1Q13835 747 aa19.98■□□□□ 0.79
PFN1-201ENST00000225655 MRPL10Q7Z7H8 261 aaKnown RBP19.98■□□□□ 0.79
PFN1-201ENST00000225655 RNF135Q8IUD6 432 aa19.98■□□□□ 0.79
PFN1-201ENST00000225655 SUSD6Q92537 303 aa19.98■□□□□ 0.79
PFN1-201ENST00000225655 TMEM169Q96HH4 297 aa19.98■□□□□ 0.79
PFN1-201ENST00000225655 INPP5FQ9Y2H2 1132 aa19.98■□□□□ 0.79
PFN1-201ENST00000225655 STK24Q9Y6E0 443 aa19.98■□□□□ 0.79
PFN1-201ENST00000225655 C2orf71A6NGG8 1288 aa19.97■□□□□ 0.79
PFN1-201ENST00000225655 LOC730098B7Z3J9 87 aa19.97■□□□□ 0.79
PFN1-201ENST00000225655 NT5C1B-RDH14C9J2C7 533 aa19.97■□□□□ 0.79
PFN1-201ENST00000225655 XRCC6P12956 609 aaKnown RBP eCLIP19.97■□□□□ 0.79
PFN1-201ENST00000225655 PTENP60484 403 aa19.97■□□□□ 0.79
PFN1-201ENST00000225655 ATP2C1P98194 919 aaPredicted RBP19.97■□□□□ 0.79
PFN1-201ENST00000225655 RNASELQ05823 741 aaKnown RBP19.97■□□□□ 0.79
PFN1-201ENST00000225655 TFDP1Q14186 410 aa19.97■□□□□ 0.79
PFN1-201ENST00000225655 BMS1Q14692 1282 aaKnown RBP19.97■□□□□ 0.79
PFN1-201ENST00000225655 SF3A1Q15459 793 aaKnown RBP19.97■□□□□ 0.79
PFN1-201ENST00000225655 HERC4Q5GLZ8 1057 aaPredicted RBP19.97■□□□□ 0.79
PFN1-201ENST00000225655 UBXN11Q5T124 520 aa19.97■□□□□ 0.79
PFN1-201ENST00000225655 ARL6IP4Q66PJ3 421 aaKnown RBP19.97■□□□□ 0.79
PFN1-201ENST00000225655 ANKRD54Q6NXT1 300 aa19.97■□□□□ 0.79
PFN1-201ENST00000225655 DTHD1Q6ZMT9 781 aa19.97■□□□□ 0.79
PFN1-201ENST00000225655 AGMOQ6ZNB7 445 aa19.97■□□□□ 0.79
PFN1-201ENST00000225655 IFNLR1Q8IU57 520 aaPredicted RBP19.97■□□□□ 0.79
PFN1-201ENST00000225655 ERMNQ8TAM6 284 aa19.97■□□□□ 0.79
PFN1-201ENST00000225655 IGSF21Q96ID5 467 aa19.97■□□□□ 0.79
PFN1-201ENST00000225655 PHF7Q9BWX1 381 aaPredicted RBP19.97■□□□□ 0.79
PFN1-201ENST00000225655 NRDE2Q9H7Z3 1164 aa19.97■□□□□ 0.79
PFN1-201ENST00000225655 CNTNAP2Q9UHC6 1331 aa19.97■□□□□ 0.79
PFN1-201ENST00000225655 ERLIN2O94905 339 aa19.96■□□□□ 0.79
PFN1-201ENST00000225655 GALTP07902 379 aa19.96■□□□□ 0.79
PFN1-201ENST00000225655 HOXB8P17481 243 aaPredicted RBP19.96■□□□□ 0.79
PFN1-201ENST00000225655 DDIT3P35638 169 aa19.96■□□□□ 0.79
PFN1-201ENST00000225655 PLA2G5P39877 138 aa19.96■□□□□ 0.79
PFN1-201ENST00000225655 TECP42680 631 aa19.96■□□□□ 0.79
PFN1-201ENST00000225655 RARRES1P49788 294 aa19.96■□□□□ 0.79
PFN1-201ENST00000225655 DDX53Q86TM3 631 aaKnown RBP19.96■□□□□ 0.79
PFN1-201ENST00000225655 TMEM173Q86WV6 379 aaPredicted RBP19.96■□□□□ 0.79
PFN1-201ENST00000225655 URGCPQ8TCY9 931 aa19.96■□□□□ 0.79
PFN1-201ENST00000225655 S1PR5Q9H228 398 aa19.96■□□□□ 0.79
PFN1-201ENST00000225655 TMEM60Q9H2L4 133 aa19.96■□□□□ 0.79
PFN1-201ENST00000225655 RSAD1Q9HA92 442 aa19.96■□□□□ 0.79
PFN1-201ENST00000225655 CHMP5Q9NZZ3 219 aa19.96■□□□□ 0.79
PFN1-201ENST00000225655 MUTYHQ9UIF7 546 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms