RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 HOOK3Q86VS8 718 aa8.52□□□□□ -1.05
SCG3-201ENST00000220478 KBTBD2Q8IY47 623 aa8.52□□□□□ -1.05
SCG3-201ENST00000220478 NEK9Q8TD19 979 aa8.52□□□□□ -1.05
SCG3-201ENST00000220478 CKAP2Q8WWK9 683 aa8.52□□□□□ -1.05
SCG3-201ENST00000220478 SLX1AQ9BQ83 275 aa8.52□□□□□ -1.05
SCG3-201ENST00000220478 NUDT12Q9BQG2 462 aa8.52□□□□□ -1.05
SCG3-201ENST00000220478 DENND2DQ9H6A0 471 aaPredicted RBP8.52□□□□□ -1.05
SCG3-201ENST00000220478 NMRK1Q9NWW6 199 aa8.52□□□□□ -1.05
SCG3-201ENST00000220478 CTNNAL1Q9UBT7 734 aa8.52□□□□□ -1.05
SCG3-201ENST00000220478 MAFBQ9Y5Q3 323 aaPredicted RBP8.52□□□□□ -1.05
SCG3-201ENST00000220478 FGFR4P22455 802 aa8.52□□□□□ -1.05
SCG3-201ENST00000220478 RAD23BP54727 409 aa8.52□□□□□ -1.05
SCG3-201ENST00000220478 GIT2Q14161 759 aa8.52□□□□□ -1.05
SCG3-201ENST00000220478 LRRC41Q15345 812 aa8.52□□□□□ -1.05
SCG3-201ENST00000220478 MAPRE1Q15691 268 aaKnown RBP8.52□□□□□ -1.05
SCG3-201ENST00000220478 CNNM4Q6P4Q7 775 aa8.52□□□□□ -1.05
SCG3-201ENST00000220478 DAGLBQ8NCG7 672 aa8.52□□□□□ -1.05
SCG3-201ENST00000220478 SH3RF3Q8TEJ3 882 aaPredicted RBP8.52□□□□□ -1.05
SCG3-201ENST00000220478 PIGOQ8TEQ8 1089 aa8.52□□□□□ -1.05
SCG3-201ENST00000220478 BICD1Q96G01 975 aa8.52□□□□□ -1.05
SCG3-201ENST00000220478 MIPEPQ99797 713 aa8.52□□□□□ -1.05
SCG3-201ENST00000220478 SIX2Q9NPC8 291 aa8.52□□□□□ -1.05
SCG3-201ENST00000220478 OSGEPQ9NPF4 335 aa8.52□□□□□ -1.05
SCG3-201ENST00000220478 SEC63Q9UGP8 760 aaKnown RBP8.52□□□□□ -1.05
SCG3-201ENST00000220478 USP20Q9Y2K6 914 aa8.52□□□□□ -1.05
SCG3-201ENST00000220478 ARL2BPQ9Y2Y0 163 aa8.52□□□□□ -1.05
SCG3-201ENST00000220478 PCDHGA4Q9Y5G9 962 aa8.52□□□□□ -1.05
SCG3-201ENST00000220478 SMIM23A6NLE4 172 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 ECE2O60344 883 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 ENTPD5O75356 428 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 VCAM1P19320 739 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 DRG2P55039 364 aaKnown RBP8.51□□□□□ -1.05
SCG3-201ENST00000220478 JAM2P57087 298 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 MXRA7P84157 204 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 ARID5AQ03989 594 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 LRRC63Q05C16 580 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 MOGSQ13724 837 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 UNC13DQ70J99 1090 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 CATIPQ7Z7H3 387 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 CYP4X1Q8N118 509 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 SLC30A5Q8TAD4 765 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 ALG3Q92685 438 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 ESR2Q92731 530 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 SYT11Q9BT88 431 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 TLE6Q9H808 572 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 PPCSQ9HAB8 311 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 MLXIPLQ9NP71 852 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 DLGAP2Q9P1A6 1054 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 SYNPO2Q9UMS6 1093 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 TMEM120BA0PK00 339 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 FGGP02679 453 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 VIL1P09327 827 aaKnown RBP8.51□□□□□ -1.05
SCG3-201ENST00000220478 GNAT2P19087 354 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 UBA7P41226 1012 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 CTSWP56202 376 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 CTC1Q2NKJ3 1217 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 CERKLQ49MI3 558 aaPredicted RBP8.51□□□□□ -1.05
SCG3-201ENST00000220478 DPY19L2Q6NUT2 758 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 RFWD3Q6PCD5 774 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 MIGA2Q7L4E1 593 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 JAMLQ86YT9 394 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 CCNJLQ8IV13 435 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 APLFQ8IW19 511 aaPredicted RBP8.51□□□□□ -1.05
SCG3-201ENST00000220478 GBP7Q8N8V2 638 aaPredicted RBP8.51□□□□□ -1.05
SCG3-201ENST00000220478 UHMK1Q8TAS1 419 aaKnown RBP8.51□□□□□ -1.05
SCG3-201ENST00000220478 DNAJC19Q96DA6 116 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 C18orf8Q96DM3 657 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 DDX23Q9BUQ8 820 aaKnown RBP8.51□□□□□ -1.05
SCG3-201ENST00000220478 SEZ6LQ9BYH1 1024 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 EURLQ9NYK6 297 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 GRID1Q9ULK0 1009 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 LRRD1A4D1F6 860 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 DDX3XO00571 662 aaKnown RBP eCLIP8.51□□□□□ -1.054e-7■□□□□ 8.8
SCG3-201ENST00000220478 RGS16O15492 202 aaPredicted RBP8.51□□□□□ -1.05
SCG3-201ENST00000220478 FGFR1P11362 822 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 IMPDH2P12268 514 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 SSTR3P32745 418 aaPredicted RBP8.51□□□□□ -1.05
SCG3-201ENST00000220478 PSMC4P43686 418 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 SCNN1BP51168 640 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 CCDC92Q53HC0 331 aaPredicted RBP8.51□□□□□ -1.05
SCG3-201ENST00000220478 BTNL9Q6UXG8 535 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 LNX1Q8TBB1 728 aaPredicted RBP8.51□□□□□ -1.05
SCG3-201ENST00000220478 SNRNP27Q8WVK2 155 aaKnown RBP8.51□□□□□ -1.05
SCG3-201ENST00000220478 PLEKHG4BQ96PX9 1271 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 ORAI2Q96SN7 254 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 KIAA1683Q9H0B3 1180 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 RNF41Q9H4P4 317 aaPredicted RBP8.51□□□□□ -1.05
SCG3-201ENST00000220478 ETNK1Q9HBU6 452 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 HSFX1Q9UBD0 423 aa8.51□□□□□ -1.05
SCG3-201ENST00000220478 UTP11Q9Y3A2 253 aaKnown RBP8.51□□□□□ -1.05
SCG3-201ENST00000220478 ITGB4P16144 1822 aa8.5□□□□□ -1.05
SCG3-201ENST00000220478 A0A0A6YYK5 440 aaPredicted RBP8.5□□□□□ -1.05
SCG3-201ENST00000220478 MINDY4BA8MYZ0 360 aa8.5□□□□□ -1.05
SCG3-201ENST00000220478 FLOT1O75955 427 aa8.5□□□□□ -1.05
SCG3-201ENST00000220478 UQCRFS1P1P0C7P4 283 aa8.5□□□□□ -1.05
SCG3-201ENST00000220478 TAC1P20366 129 aa8.5□□□□□ -1.05
SCG3-201ENST00000220478 KLHL30Q0D2K2 578 aa8.5□□□□□ -1.05
SCG3-201ENST00000220478 MTFR1Q15390 333 aa8.5□□□□□ -1.05
SCG3-201ENST00000220478 KHDC1Q4VXA5 237 aaKnown RBP8.5□□□□□ -1.05
SCG3-201ENST00000220478 KIAA1755Q5JYT7 1200 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms