RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 TEX12Q9BXU0 123 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 ZNF180Q9UJW8 692 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 SLC13A4Q9UKG4 626 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 FRMPD2Q68DX3 1309 aaPredicted RBP11.73□□□□□ -0.53
USP31-201ENST00000219689 KLHL38Q2WGJ6 581 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 POTEAQ6S8J7 498 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 FAM180AQ6UWF9 173 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 MTBPQ96DY7 904 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 ANKRD27Q96NW4 1050 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 DISC1Q9NRI5 854 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 LRRC53A6NM62 1247 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 SOX11P35716 441 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 MKRN4PQ13434 485 aaPredicted RBP11.73□□□□□ -0.53
USP31-201ENST00000219689 PRKG1Q13976 671 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 ANKMY2Q8IV38 441 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 NDST4Q9H3R1 872 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 ZSCAN9O15535 394 aaPredicted RBP11.72□□□□□ -0.53
USP31-201ENST00000219689 SEMA3DO95025 777 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 PLCG1P19174 1290 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 TMEM63BQ5T3F8 832 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 UBE2Q1Q7Z7E8 422 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 NARS2Q96I59 477 aaKnown RBP11.72□□□□□ -0.53
USP31-201ENST00000219689 SUN2Q9UH99 717 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 LRRC74BQ6ZQY2 392 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 TMC4Q7Z404 712 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 TUBA8Q9NY65 449 aaPredicted RBP11.72□□□□□ -0.53
USP31-201ENST00000219689 PRELID1Q9Y255 219 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 RPAP1Q9BWH6 1393 aaPredicted RBP11.72□□□□□ -0.53
USP31-201ENST00000219689 C16orf96A6NNT2 1141 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 NEMP1O14524 444 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 MYCLP12524 364 aaPredicted RBP11.72□□□□□ -0.53
USP31-201ENST00000219689 SMARCA1P28370 1054 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 PSMC6P62333 389 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 PDAP1Q13442 181 aaKnown RBP11.72□□□□□ -0.53
USP31-201ENST00000219689 RNF19BQ6ZMZ0 732 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 ZNF589Q86UQ0 364 aaPredicted RBP11.72□□□□□ -0.53
USP31-201ENST00000219689 TRIM51Q9BSJ1 452 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 DCUN1D5Q9BTE7 237 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 BRIP1Q9BX63 1249 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 OSBPL8Q9BZF1 889 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 DCLRE1BQ9H816 532 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 KIAA1024Q9UPX6 916 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 V9GYQ6 96 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 KRT73Q86Y46 540 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 CNDP1Q96KN2 507 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 CHP1Q99653 195 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 NUP85Q9BW27 656 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 MRPS26Q9BYN8 205 aaKnown RBP11.72□□□□□ -0.53
USP31-201ENST00000219689 UBN2Q6ZU65 1347 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 LDHBP07195 334 aaKnown RBP11.72□□□□□ -0.53
USP31-201ENST00000219689 IL12RB1P42701 662 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 TBC1D10BQ4KMP7 808 aaPredicted RBP11.72□□□□□ -0.53
USP31-201ENST00000219689 WWP1Q9H0M0 922 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 APC2O95996 2303 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 WASLO00401 505 aaPredicted RBP11.72□□□□□ -0.53
USP31-201ENST00000219689 RGS5O15539 181 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 PMLP29590 882 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 FAM26FQ5R3K3 315 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 RASGRP2Q7LDG7 609 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 CROCCP3Q8IVE0 287 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 LRRN4CLQ8ND94 238 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 LPIN2Q92539 896 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 OTULINQ96BN8 352 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 CARD14Q9BXL6 1004 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 OTOFQ9HC10 1997 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 KRT6AP02538 564 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 KRT6BP04259 564 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 HSD17B3P37058 310 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 KRT6CP48668 564 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 MTHFSDQ2M296 383 aaKnown RBP11.72□□□□□ -0.53
USP31-201ENST00000219689 B3GNT6Q6ZMB0 384 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 SCUBE1Q8IWY4 988 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 RIN3Q8TB24 985 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 ZBTB18Q99592 522 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 C20orf96Q9NUD7 363 aaPredicted RBP11.72□□□□□ -0.53
USP31-201ENST00000219689 TRPM2O94759 1503 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 TBKBP1A7MCY6 615 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 LVRNQ6Q4G3 990 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 KRT27Q7Z3Y8 459 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 ZSCAN10Q96SZ4 725 aaPredicted RBP11.72□□□□□ -0.53
USP31-201ENST00000219689 VPS11Q9H270 941 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 PCDHB6Q9Y5E3 794 aa11.72□□□□□ -0.53
USP31-201ENST00000219689 WDR64B1ANS9 1081 aa11.71□□□□□ -0.53
USP31-201ENST00000219689 SLC1A4P43007 532 aa11.71□□□□□ -0.53
USP31-201ENST00000219689 ZBED8Q8IZ13 594 aa11.71□□□□□ -0.53
USP31-201ENST00000219689 SUCLG2Q96I99 432 aa11.71□□□□□ -0.53
USP31-201ENST00000219689 SLITRK6Q9H5Y7 841 aa11.71□□□□□ -0.53
USP31-201ENST00000219689 DCDC2Q9UHG0 476 aa11.71□□□□□ -0.53
USP31-201ENST00000219689 SH3GLB1Q9Y371 365 aa11.71□□□□□ -0.53
USP31-201ENST00000219689 CLEC17AQ6ZS10 378 aa11.71□□□□□ -0.53
USP31-201ENST00000219689 FMR1NBQ8N0W7 255 aaPredicted RBP11.71□□□□□ -0.53
USP31-201ENST00000219689 CCNYL1Q8N7R7 359 aa11.71□□□□□ -0.53
USP31-201ENST00000219689 UBASH3BQ8TF42 649 aa11.71□□□□□ -0.53
USP31-201ENST00000219689 C1orf54Q8WWF1 131 aa11.71□□□□□ -0.53
USP31-201ENST00000219689 ARHGEF1Q92888 912 aaKnown RBP11.71□□□□□ -0.53
USP31-201ENST00000219689 NSMCE4AQ9NXX6 385 aa11.71□□□□□ -0.53
USP31-201ENST00000219689 SPDYE2BA6NHP3 402 aa11.71□□□□□ -0.53
USP31-201ENST00000219689 BCL10O95999 233 aa11.71□□□□□ -0.53
USP31-201ENST00000219689 SPDYE6P0CI01 402 aa11.71□□□□□ -0.53
USP31-201ENST00000219689 HNRNPLLQ8WVV9 542 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms