RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 TNIP3Q96KP6 325 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 EPB41L4AQ9HCS5 686 aaPredicted RBP14.74□□□□□ -0.05
SIX4-201ENST00000216513 PRKAR2AP13861 404 aaKnown RBP14.73□□□□□ -0.05
SIX4-201ENST00000216513 GLRA4Q5JXX5 417 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 ATF7IP2Q5U623 682 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 VPS52Q8N1B4 723 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 STKLD1Q8NE28 680 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 GAS2L1Q99501 681 aaPredicted RBP14.73□□□□□ -0.05
SIX4-201ENST00000216513 ABI2Q9NYB9 513 aaPredicted RBP14.73□□□□□ -0.05
SIX4-201ENST00000216513 ZNF521Q96K83 1311 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 C3P01024 1663 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 SOX5P35711 763 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 C2orf54Q08AI8 447 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 COASYQ13057 564 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 ACVR2BQ13705 512 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 MAN2A1Q16706 1144 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 TOGARAM2Q6ZUX3 1019 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 SOWAHDA6NJG2 315 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 KLRC2P26717 231 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 RFC5P40937 340 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 EHHADHQ08426 723 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 KIAA1755Q5JYT7 1200 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 PPP1R13LQ8WUF5 828 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 DDX50Q9BQ39 737 aaKnown RBP14.73□□□□□ -0.05
SIX4-201ENST00000216513 MRPL47Q9HD33 250 aaKnown RBP14.73□□□□□ -0.05
SIX4-201ENST00000216513 TAL1P17542 331 aaPredicted RBP14.73□□□□□ -0.05
SIX4-201ENST00000216513 MCUQ8NE86 351 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 SENP7Q9BQF6 1050 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 NKIRAS1Q9NYS0 192 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 NDUFAB1O14561 156 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 SRGAP2O75044 1071 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 CLCN3P51790 818 aa14.73□□□□□ -0.05
SIX4-201ENST00000216513 DCP1BQ8IZD4 617 aaKnown RBP14.73□□□□□ -0.05
SIX4-201ENST00000216513 ARHGEF2Q92974 986 aaKnown RBP14.73□□□□□ -0.05
SIX4-201ENST00000216513 ZNF512BQ96KM6 892 aaPredicted RBP14.73□□□□□ -0.05
SIX4-201ENST00000216513 PPP1R12AO14974 1030 aaPredicted RBP14.72□□□□□ -0.05
SIX4-201ENST00000216513 ASAP2O43150 1006 aa14.72□□□□□ -0.05
SIX4-201ENST00000216513 ZC3H15Q8WU90 426 aaKnown RBP14.72□□□□□ -0.05
SIX4-201ENST00000216513 SNX19Q92543 992 aa14.72□□□□□ -0.05
SIX4-201ENST00000216513 IFT43Q96FT9 208 aa14.72□□□□□ -0.05
SIX4-201ENST00000216513 SPTLC3Q9NUV7 552 aa14.72□□□□□ -0.05
SIX4-201ENST00000216513 UBE4BO95155 1302 aa14.72□□□□□ -0.05
SIX4-201ENST00000216513 PITPNM2Q9BZ72 1349 aa14.72□□□□□ -0.05
SIX4-201ENST00000216513 LRRD1A4D1F6 860 aa14.72□□□□□ -0.05
SIX4-201ENST00000216513 GHRP10912 638 aa14.72□□□□□ -0.05
SIX4-201ENST00000216513 RAD51Q06609 339 aa14.72□□□□□ -0.05
SIX4-201ENST00000216513 WDR72Q3MJ13 1102 aa14.72□□□□□ -0.05
SIX4-201ENST00000216513 NKX2-3Q8TAU0 364 aa14.72□□□□□ -0.05
SIX4-201ENST00000216513 TUFT1Q9NNX1 390 aa14.72□□□□□ -0.05
SIX4-201ENST00000216513 PPP2R2CQ9Y2T4 447 aa14.72□□□□□ -0.05
SIX4-201ENST00000216513 TMX2Q9Y320 296 aa14.72□□□□□ -0.05
SIX4-201ENST00000216513 SNX17Q15036 470 aa14.72□□□□□ -0.05
SIX4-201ENST00000216513 GUCY1A2P33402 732 aa14.72□□□□□ -0.05
SIX4-201ENST00000216513 VAMP7P51809 220 aa14.72□□□□□ -0.05
SIX4-201ENST00000216513 SPATA24Q86W54 205 aa14.72□□□□□ -0.05
SIX4-201ENST00000216513 SP110Q9HB58 689 aa14.72□□□□□ -0.05
SIX4-201ENST00000216513 PMLP29590 882 aa14.71□□□□□ -0.05
SIX4-201ENST00000216513 TM4SF1P30408 202 aa14.71□□□□□ -0.05
SIX4-201ENST00000216513 KCNB1Q14721 858 aa14.71□□□□□ -0.05
SIX4-201ENST00000216513 GKAP1Q5VSY0 366 aaPredicted RBP14.71□□□□□ -0.05
SIX4-201ENST00000216513 ATP6V1E2Q96A05 226 aa14.71□□□□□ -0.05
SIX4-201ENST00000216513 FEZ2Q9UHY8 353 aaPredicted RBP14.71□□□□□ -0.05
SIX4-201ENST00000216513 MAN1B1Q9UKM7 699 aa14.71□□□□□ -0.05
SIX4-201ENST00000216513 MCF2LO15068 1137 aa14.71□□□□□ -0.05
SIX4-201ENST00000216513 ASMTLO95671 621 aa14.71□□□□□ -0.05
SIX4-201ENST00000216513 PTPRAP18433 802 aa14.71□□□□□ -0.05
SIX4-201ENST00000216513 ADCYAP1R1P41586 468 aa14.71□□□□□ -0.05
SIX4-201ENST00000216513 SLC7A5Q01650 507 aa14.71□□□□□ -0.05
SIX4-201ENST00000216513 THOC5Q13769 683 aaKnown RBP14.71□□□□□ -0.05
SIX4-201ENST00000216513 RAPH1Q70E73 1250 aa14.71□□□□□ -0.05
SIX4-201ENST00000216513 LRRC43Q8N309 656 aa14.71□□□□□ -0.05
SIX4-201ENST00000216513 LINC00301Q8NCQ3 95 aa14.71□□□□□ -0.05
SIX4-201ENST00000216513 KRIT1O00522 736 aa14.71□□□□□ -0.05
SIX4-201ENST00000216513 NFIBO00712 420 aa14.71□□□□□ -0.05
SIX4-201ENST00000216513 MSCO60682 206 aa14.71□□□□□ -0.05
SIX4-201ENST00000216513 FTCDO95954 541 aa14.71□□□□□ -0.05
SIX4-201ENST00000216513 NMT1P30419 496 aaKnown RBP14.71□□□□□ -0.05
SIX4-201ENST00000216513 BCAR1P56945 870 aa14.71□□□□□ -0.05
SIX4-201ENST00000216513 UNC13DQ70J99 1090 aa14.71□□□□□ -0.05
SIX4-201ENST00000216513 FIS1Q9Y3D6 152 aa14.71□□□□□ -0.05
SIX4-201ENST00000216513 NKRFO15226 690 aaKnown RBP eCLIP14.71□□□□□ -0.05
SIX4-201ENST00000216513 FKBP1BP68106 108 aa14.71□□□□□ -0.05
SIX4-201ENST00000216513 TOB2Q14106 344 aaPredicted RBP14.71□□□□□ -0.05
SIX4-201ENST00000216513 DNAJB3Q8WWF6 145 aa14.71□□□□□ -0.05
SIX4-201ENST00000216513 REREQ9P2R6 1566 aa14.71□□□□□ -0.05
SIX4-201ENST00000216513 MAFGO15525 162 aa14.71□□□□□ -0.06
SIX4-201ENST00000216513 TOMM70O94826 608 aa14.71□□□□□ -0.06
SIX4-201ENST00000216513 IVLP07476 585 aa14.71□□□□□ -0.06
SIX4-201ENST00000216513 LRRC8AQ8IWT6 810 aa14.71□□□□□ -0.06
SIX4-201ENST00000216513 ATP2A3Q93084 1043 aa14.71□□□□□ -0.06
SIX4-201ENST00000216513 GPRASP2Q96D09 838 aa14.71□□□□□ -0.06
SIX4-201ENST00000216513 CFAP57Q96MR6 1250 aa14.71□□□□□ -0.06
SIX4-201ENST00000216513 ANAPC4Q9UJX5 808 aa14.71□□□□□ -0.06
SIX4-201ENST00000216513 IKBKEQ14164 716 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 MFSD10Q14728 455 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 GRK7Q8WTQ7 553 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 SLC4A9Q96Q91 983 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 ABHD16BQ9H3Z7 469 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 FLT3LGP49771 235 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 RBP5P82980 135 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms