RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 E4F1Q66K89 784 aaPredicted RBP15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 TBC1D19Q8N5T2 526 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 TSSK1BQ9BXA7 367 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 PIDD1Q9HB75 910 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 KLC4Q9NSK0 619 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 ADGRF5Q8IZF2 1346 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 ZNF394Q53GI3 561 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 CDH24Q86UP0 819 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 POLR3EQ9NVU0 708 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 RNMTO43148 476 aaKnown RBP15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 MTRF1O75570 445 aaKnown RBP15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 CDC27P30260 824 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 ARL4DP49703 201 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 MXI1P50539 228 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 ARHGEF6Q15052 776 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 KIAA0825Q8IV33 1275 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 AK8Q96MA6 479 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 UXS1Q8NBZ7 420 aa15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 CYP19A1P11511 503 aaPredicted RBP15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 EMBQ6PCB8 327 aa15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 PRMT1Q99873 361 aaKnown RBP15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 ADCY9O60503 1353 aa15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 K7ERI5 159 aa15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 KCNA3P22001 575 aa15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 OSBPP22059 807 aa15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 KLC1Q07866 573 aa15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 SURF1Q15526 300 aa15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 TRIM16LQ309B1 348 aa15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 AKIRIN2Q53H80 203 aa15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 TMC5Q6UXY8 1006 aa15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 MYO9BQ13459 2157 aa15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 DPYSL4O14531 572 aa15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 MLNP12872 115 aa15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 ENO3P13929 434 aaPredicted RBP15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 HEATR6Q6AI08 1181 aaKnown RBP15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 C11orf96Q7Z7L8 435 aa15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 UNC45BQ8IWX7 931 aa15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 CCDC87Q9NVE4 849 aa15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 PCF11O94913 1555 aaKnown RBP15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 PPP2R2AP63151 447 aa15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 SLFN12LQ6IEE8 588 aa15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 APLFQ8IW19 511 aaPredicted RBP15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 IFNL3Q8IZI9 196 aa15.46■□□□□ 0.07
SPTLC2-201ENST00000216484 FAM107AO95990 144 aa15.46■□□□□ 0.06
SPTLC2-201ENST00000216484 SOAT1P35610 550 aa15.46■□□□□ 0.06
SPTLC2-201ENST00000216484 CAV1Q03135 178 aa15.46■□□□□ 0.06
SPTLC2-201ENST00000216484 ANKRD40Q6AI12 368 aa15.46■□□□□ 0.06
SPTLC2-201ENST00000216484 KDELC2Q7Z4H8 507 aa15.46■□□□□ 0.06
SPTLC2-201ENST00000216484 MSTO1Q9BUK6 570 aa15.46■□□□□ 0.06
SPTLC2-201ENST00000216484 KIFC1Q9BW19 673 aa15.46■□□□□ 0.06
SPTLC2-201ENST00000216484 CDCA7Q9BWT1 371 aaPredicted RBP15.46■□□□□ 0.06
SPTLC2-201ENST00000216484 IMPAD1Q9NX62 359 aa15.46■□□□□ 0.06
SPTLC2-201ENST00000216484 ZNF197O14709 1029 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 VAMP4O75379 141 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 TRIM32Q13049 653 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 RIN3Q8TB24 985 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 GPT2Q8TD30 523 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 V9GYQ6 96 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 CITO14578 2027 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 CYLC2Q14093 348 aaPredicted RBP15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 LRRC14Q15048 493 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 RABGAP1LQ5R372 815 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 ZNF790Q6PG37 636 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 KRT78Q8N1N4 520 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 DOLKQ9UPQ8 538 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 KIF1BO60333 1816 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 TYK2P29597 1187 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 PDXDC2PQ6P474 469 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 TMEM154Q6P9G4 183 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 NPHS2Q9NP85 383 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 RIMS2Q9UQ26 1411 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 NDUFB5O43674 189 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 SERPINB3P29508 390 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 CCNA1P78396 465 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 SLFNL1Q499Z3 407 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 OR8H2Q8N162 312 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 C10orf53Q8N6V4 93 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 RBM41Q96IZ5 413 aaKnown RBP15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 YTHDC2Q9H6S0 1430 aaKnown RBP15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 TCP11X1B4DZS4 312 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 HSPA2P54652 639 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 CDC37Q16543 378 aaPredicted RBP15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 SLC30A9Q6PML9 568 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 C19orf18Q8NEA5 215 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 TCN1P20061 433 aaPredicted RBP15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 CSTF3Q12996 717 aaKnown RBP15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 LAMC2Q13753 1193 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 RMDN1Q96DB5 314 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 USP44Q9H0E7 712 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 MAN1B1Q9UKM7 699 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 DOK7Q18PE1 504 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 FOPNLQ96NB1 174 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 ASNSD1Q9NWL6 643 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 RWDD2AQ9UIY3 292 aa15.45■□□□□ 0.06
SPTLC2-201ENST00000216484 CARMIL3Q8ND23 1372 aa15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 CTSWP56202 376 aa15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 KLHL25Q9H0H3 589 aa15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 TRPM2O94759 1503 aa15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 GOLGA8JA6NMD2 632 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms