RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 PRPF6O94906 941 aaKnown RBP4.13□□□□□ -1.75
CDKN3-201ENST00000216414 SLC9A1P19634 815 aa4.13□□□□□ -1.75
CDKN3-201ENST00000216414 ATP2B1P20020 1258 aa4.13□□□□□ -1.75
CDKN3-201ENST00000216414 CASRP41180 1078 aa4.13□□□□□ -1.75
CDKN3-201ENST00000216414 AVPR1BP47901 424 aa4.13□□□□□ -1.75
CDKN3-201ENST00000216414 ADCY1Q08828 1119 aa4.13□□□□□ -1.75
CDKN3-201ENST00000216414 IQSEC1Q6DN90 963 aa4.13□□□□□ -1.75
CDKN3-201ENST00000216414 TIGD7Q6NT04 549 aaPredicted RBP4.13□□□□□ -1.75
CDKN3-201ENST00000216414 GDF7Q7Z4P5 450 aa4.13□□□□□ -1.75
CDKN3-201ENST00000216414 PHYKPLQ8IUZ5 450 aa4.13□□□□□ -1.75
CDKN3-201ENST00000216414 OR52N2Q8NGI0 321 aa4.13□□□□□ -1.75
CDKN3-201ENST00000216414 ZNF428Q96B54 188 aa4.13□□□□□ -1.75
CDKN3-201ENST00000216414 HIST1H2AHQ96KK5 128 aa4.13□□□□□ -1.75
CDKN3-201ENST00000216414 DNAJC7Q99615 494 aa4.13□□□□□ -1.75
CDKN3-201ENST00000216414 HIST1H2AJQ99878 128 aa4.13□□□□□ -1.75
CDKN3-201ENST00000216414 MYL10Q9BUA6 226 aa4.13□□□□□ -1.75
CDKN3-201ENST00000216414 TANGO6Q9C0B7 1094 aa4.13□□□□□ -1.75
CDKN3-201ENST00000216414 R3HDMLQ9H3Y0 253 aa4.13□□□□□ -1.75
CDKN3-201ENST00000216414 NCOA5Q9HCD5 579 aaKnown RBP4.13□□□□□ -1.75
CDKN3-201ENST00000216414 SNTG2Q9NY99 539 aa4.13□□□□□ -1.75
CDKN3-201ENST00000216414 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.13□□□□□ -1.75
CDKN3-201ENST00000216414 RNASET2O00584 256 aaKnown RBP4.12□□□□□ -1.75
CDKN3-201ENST00000216414 NCR1O76036 304 aa4.12□□□□□ -1.75
CDKN3-201ENST00000216414 NDUFA10O95299 355 aa4.12□□□□□ -1.75
CDKN3-201ENST00000216414 GAAP10253 952 aa4.12□□□□□ -1.75
CDKN3-201ENST00000216414 GTF2F1P35269 517 aaKnown RBP eCLIP4.12□□□□□ -1.75
CDKN3-201ENST00000216414 IGFALSP35858 605 aa4.12□□□□□ -1.75
CDKN3-201ENST00000216414 ERCC6LQ2NKX8 1250 aa4.12□□□□□ -1.75
CDKN3-201ENST00000216414 NAALADL2Q58DX5 795 aa4.12□□□□□ -1.75
CDKN3-201ENST00000216414 METTL24Q5JXM2 366 aa4.12□□□□□ -1.75
CDKN3-201ENST00000216414 COLEC12Q5KU26 742 aa4.12□□□□□ -1.75
CDKN3-201ENST00000216414 KIAA1841Q6NSI8 718 aa4.12□□□□□ -1.75
CDKN3-201ENST00000216414 CCDC62Q6P9F0 684 aa4.12□□□□□ -1.75
CDKN3-201ENST00000216414 UNQ6494/PRO21346Q6UXR6 183 aa4.12□□□□□ -1.75
CDKN3-201ENST00000216414 KANSL1Q7Z3B3 1105 aa4.12□□□□□ -1.75
CDKN3-201ENST00000216414 LILRA3Q8N6C8 439 aaPredicted RBP4.12□□□□□ -1.75
CDKN3-201ENST00000216414 PIK3C3Q8NEB9 887 aa4.12□□□□□ -1.75
CDKN3-201ENST00000216414 IL17RAQ96F46 866 aa4.12□□□□□ -1.75
CDKN3-201ENST00000216414 DCLRE1CQ96SD1 692 aaKnown RBP4.12□□□□□ -1.75
CDKN3-201ENST00000216414 PDCD2LQ9BRP1 358 aa4.12□□□□□ -1.75
CDKN3-201ENST00000216414 SOX7Q9BT81 388 aa4.12□□□□□ -1.75
CDKN3-201ENST00000216414 LSM14BQ9BX40 385 aaKnown RBP4.12□□□□□ -1.75
CDKN3-201ENST00000216414 ENKD1Q9H0I2 346 aa4.12□□□□□ -1.75
CDKN3-201ENST00000216414 POFUT1Q9H488 388 aa4.12□□□□□ -1.75
CDKN3-201ENST00000216414 AKIP1Q9NQ31 210 aa4.12□□□□□ -1.75
CDKN3-201ENST00000216414 COX11Q9Y6N1 276 aa4.12□□□□□ -1.75
CDKN3-201ENST00000216414 TMEM200CA6NKL6 621 aa4.11□□□□□ -1.75
CDKN3-201ENST00000216414 OPA1O60313 960 aa4.11□□□□□ -1.75
CDKN3-201ENST00000216414 PCDH8O95206 1070 aa4.11□□□□□ -1.75
CDKN3-201ENST00000216414 RAPGEF3O95398 923 aa4.11□□□□□ -1.75
CDKN3-201ENST00000216414 ESRP1Q6NXG1 681 aaKnown RBP4.11□□□□□ -1.75
CDKN3-201ENST00000216414 FBXO42Q6P3S6 717 aa4.11□□□□□ -1.75
CDKN3-201ENST00000216414 LRP10Q7Z4F1 713 aa4.11□□□□□ -1.75
CDKN3-201ENST00000216414 XYLT1Q86Y38 959 aa4.11□□□□□ -1.75
CDKN3-201ENST00000216414 ARHGEF19Q8IW93 802 aa4.11□□□□□ -1.75
CDKN3-201ENST00000216414 RTF1Q92541 710 aaKnown RBP4.11□□□□□ -1.75
CDKN3-201ENST00000216414 SRPK1Q96SB4 655 aaKnown RBP4.11□□□□□ -1.75
CDKN3-201ENST00000216414 ELF4Q99607 663 aaPredicted RBP4.11□□□□□ -1.75
CDKN3-201ENST00000216414 PRDM13Q9H4Q3 707 aa4.11□□□□□ -1.75
CDKN3-201ENST00000216414 SPON1Q9HCB6 807 aa4.11□□□□□ -1.75
CDKN3-201ENST00000216414 PTCH2Q9Y6C5 1203 aa4.11□□□□□ -1.75
CDKN3-201ENST00000216414 COL11A2P13942 1736 aaPredicted RBP4.1□□□□□ -1.75
CDKN3-201ENST00000216414 UNC119BA6NIH7 251 aa4.1□□□□□ -1.75
CDKN3-201ENST00000216414 PRR5-ARHGAP8B1AHC4 643 aa4.1□□□□□ -1.75
CDKN3-201ENST00000216414 LEFTY2O00292 366 aa4.1□□□□□ -1.75
CDKN3-201ENST00000216414 PLD2O14939 933 aa4.1□□□□□ -1.75
CDKN3-201ENST00000216414 HSP90B1P14625 803 aaKnown RBP4.1□□□□□ -1.75
CDKN3-201ENST00000216414 PTH2RP49190 550 aa4.1□□□□□ -1.75
CDKN3-201ENST00000216414 GZMKP49863 264 aa4.1□□□□□ -1.75
CDKN3-201ENST00000216414 WNT3AP56704 352 aa4.1□□□□□ -1.75
CDKN3-201ENST00000216414 RNASE9P60153 205 aaKnown RBP4.1□□□□□ -1.75
CDKN3-201ENST00000216414 DUSP2Q05923 314 aa4.1□□□□□ -1.75
CDKN3-201ENST00000216414 CD69Q07108 199 aa4.1□□□□□ -1.75
CDKN3-201ENST00000216414 MRPL49Q13405 166 aaKnown RBP4.1□□□□□ -1.75
CDKN3-201ENST00000216414 SERINC3Q13530 473 aa4.1□□□□□ -1.75
CDKN3-201ENST00000216414 PIK3R6Q5UE93 754 aa4.1□□□□□ -1.75
CDKN3-201ENST00000216414 SP5Q6BEB4 398 aaPredicted RBP4.1□□□□□ -1.75
CDKN3-201ENST00000216414 DOK3Q7L591 496 aa4.1□□□□□ -1.75
CDKN3-201ENST00000216414 UNC5BQ8IZJ1 945 aa4.1□□□□□ -1.75
CDKN3-201ENST00000216414 HIRIP3Q9BW71 556 aaPredicted RBP4.1□□□□□ -1.75
CDKN3-201ENST00000216414 TOMM22Q9NS69 142 aa4.1□□□□□ -1.75
CDKN3-201ENST00000216414 INTS7Q9NVH2 962 aaKnown RBP4.1□□□□□ -1.75
CDKN3-201ENST00000216414 PODXL2Q9NZ53 605 aa4.1□□□□□ -1.75
CDKN3-201ENST00000216414 B4GALT6Q9UBX8 382 aa4.1□□□□□ -1.75
CDKN3-201ENST00000216414 INSL6Q9Y581 213 aa4.1□□□□□ -1.75
CDKN3-201ENST00000216414 INO80B-WBP1J3KQ70 363 aa4.09□□□□□ -1.75
CDKN3-201ENST00000216414 ASLP04424 464 aa4.09□□□□□ -1.75
CDKN3-201ENST00000216414 HKR1P10072 659 aa4.09□□□□□ -1.75
CDKN3-201ENST00000216414 CXCR5P32302 372 aa4.09□□□□□ -1.75
CDKN3-201ENST00000216414 PLA2G5P39877 138 aa4.09□□□□□ -1.75
CDKN3-201ENST00000216414 GUCY1B3Q02153 619 aa4.09□□□□□ -1.75
CDKN3-201ENST00000216414 ZNF460Q14592 562 aa4.09□□□□□ -1.75
CDKN3-201ENST00000216414 ZNF362Q5T0B9 420 aaPredicted RBP4.09□□□□□ -1.75
CDKN3-201ENST00000216414 PLXDC1Q8IUK5 500 aa4.09□□□□□ -1.75
CDKN3-201ENST00000216414 CPEB3Q8NE35 698 aaKnown RBP4.09□□□□□ -1.75
CDKN3-201ENST00000216414 INO80BQ9C086 356 aaPredicted RBP4.09□□□□□ -1.75
CDKN3-201ENST00000216414 SYBUQ9NX95 663 aa4.09□□□□□ -1.75
CDKN3-201ENST00000216414 PCDHB6Q9Y5E3 794 aa4.09□□□□□ -1.75
CDKN3-201ENST00000216414 EPN1Q9Y6I3 576 aaPredicted RBP4.09□□□□□ -1.75
CDKN3-201ENST00000216414 GAGE12BA1L429 117 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms