RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 TMEM270Q6UE05 265 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 N4BP2L2Q92802 583 aaPredicted RBP13.33□□□□□ -0.28
LMCD1-201ENST00000157600 OTUB1Q96FW1 271 aaPredicted RBP13.33□□□□□ -0.28
LMCD1-201ENST00000157600 KIF9Q9HAQ2 790 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 SLC9A2Q9UBY0 812 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 PREX1Q8TCU6 1659 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 SLCO1A2P46721 670 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 ROR1Q01973 937 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 GPR162Q16538 588 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 ZNF568Q3ZCX4 644 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 RNF219Q5W0B1 726 aaPredicted RBP13.33□□□□□ -0.28
LMCD1-201ENST00000157600 CHMP6Q96FZ7 201 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 ING2Q9H160 280 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 MINPP1Q9UNW1 487 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 SPATA31A3Q5VYP0 1347 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 DIP2AQ14689 1571 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.33□□□□□ -0.28
LMCD1-201ENST00000157600 PLEKHA8P1O95397 391 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 CDC27P30260 824 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 GRAMD1BQ3KR37 738 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 EFHC2Q5JST6 749 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 LRIG3Q6UXM1 1119 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 TRIML2Q8N7C3 387 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 OR9Q1Q8NGQ5 310 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 FTOQ9C0B1 505 aaKnown RBP eCLIP13.33□□□□□ -0.28
LMCD1-201ENST00000157600 SLC7A5Q01650 507 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 HIF1AQ16665 826 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 LRRC23Q53EV4 343 aaPredicted RBP13.33□□□□□ -0.28
LMCD1-201ENST00000157600 SLC10A5Q5PT55 438 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 CATSPER4Q7RTX7 472 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 ICA1LQ8NDH6 482 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 STAMBPL1Q96FJ0 436 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 ADGRG1Q9Y653 693 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 PEX19P40855 299 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 MXD4Q14582 209 aaPredicted RBP13.33□□□□□ -0.28
LMCD1-201ENST00000157600 CEP19Q96LK0 163 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 TSC22D3Q99576 134 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 STK33Q9BYT3 514 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 SCHIP1Q9P0W5 487 aaPredicted RBP13.33□□□□□ -0.28
LMCD1-201ENST00000157600 XRRA1Q6P2D8 792 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 KRT27Q7Z3Y8 459 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 SYN2Q92777 582 aaPredicted RBP13.33□□□□□ -0.28
LMCD1-201ENST00000157600 ZNF302Q9NR11 478 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 NSMCE4AQ9NXX6 385 aa13.33□□□□□ -0.28
LMCD1-201ENST00000157600 PPARGC1AQ9UBK2 798 aaKnown RBP13.33□□□□□ -0.28
LMCD1-201ENST00000157600 USP17L5A8MUK1 530 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 DSTYKQ6XUX3 929 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 DCLK2Q8N568 766 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 TGS1Q96RS0 853 aaKnown RBP13.32□□□□□ -0.28
LMCD1-201ENST00000157600 GINM1Q9NU53 330 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 MORC2Q9Y6X9 1032 aaPredicted RBP13.32□□□□□ -0.28
LMCD1-201ENST00000157600 GGCXP38435 758 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 CCDC137Q6PK04 289 aaKnown RBP13.32□□□□□ -0.28
LMCD1-201ENST00000157600 TRAPPC11Q7Z392 1133 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 ZC3H18Q86VM9 953 aaKnown RBP13.32□□□□□ -0.28
LMCD1-201ENST00000157600 NEDD4P46934 1319 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 CDH16O75309 829 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 HSPA9P38646 679 aaKnown RBP13.32□□□□□ -0.28
LMCD1-201ENST00000157600 DHX40Q8IX18 779 aaKnown RBP13.32□□□□□ -0.28
LMCD1-201ENST00000157600 HSPH1Q92598 858 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 CEP95Q96GE4 821 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 EHD2Q9NZN4 543 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 CRKP46108 304 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 BTBD6Q96KE9 485 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 PCDHB8Q9UN66 801 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 KAT6AQ92794 2004 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 A0A1W2PQJ5 194 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 MAFGO15525 162 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 EFCAB14O75071 495 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 C1orf228Q6PIY5 440 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 GPD1LQ8N335 351 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 TNIP3Q96KP6 325 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 WWP1Q9H0M0 922 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 CFAP69A5D8W1 941 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 SYCE1LA8MT33 242 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 GH2P01242 217 aa13.32□□□□□ -0.28
LMCD1-201ENST00000157600 ABCE1P61221 599 aaKnown RBP13.32□□□□□ -0.28
LMCD1-201ENST00000157600 MAGOHP61326 146 aaKnown RBP13.32□□□□□ -0.28
LMCD1-201ENST00000157600 QTRT2Q9H974 415 aaKnown RBP13.32□□□□□ -0.28
LMCD1-201ENST00000157600 AGTP01019 485 aa13.31□□□□□ -0.28
LMCD1-201ENST00000157600 PRUNE1Q86TP1 453 aa13.31□□□□□ -0.28
LMCD1-201ENST00000157600 DDX17Q92841 729 aaKnown RBP13.31□□□□□ -0.28
LMCD1-201ENST00000157600 IFT43Q96FT9 208 aa13.31□□□□□ -0.28
LMCD1-201ENST00000157600 DBNDD1Q9H9R9 158 aa13.31□□□□□ -0.28
LMCD1-201ENST00000157600 INTUQ9ULD6 942 aa13.31□□□□□ -0.28
LMCD1-201ENST00000157600 GDAQ9Y2T3 454 aa13.31□□□□□ -0.28
LMCD1-201ENST00000157600 INO80Q9ULG1 1556 aaPredicted RBP13.31□□□□□ -0.28
LMCD1-201ENST00000157600 P4HA2O15460 535 aa13.31□□□□□ -0.28
LMCD1-201ENST00000157600 MAN1A2O60476 641 aa13.31□□□□□ -0.28
LMCD1-201ENST00000157600 EIF2AK2P19525 551 aaKnown RBP13.31□□□□□ -0.28
LMCD1-201ENST00000157600 MTHFD1LQ6UB35 978 aa13.31□□□□□ -0.28
LMCD1-201ENST00000157600 ATL2Q8NHH9 583 aa13.31□□□□□ -0.28
LMCD1-201ENST00000157600 SCFD1Q8WVM8 642 aa13.31□□□□□ -0.28
LMCD1-201ENST00000157600 C7orf25Q9BPX7 421 aa13.31□□□□□ -0.28
LMCD1-201ENST00000157600 A0A1B0GTH6 734 aa13.31□□□□□ -0.28
LMCD1-201ENST00000157600 CLRN2A0PK11 232 aa13.31□□□□□ -0.28
LMCD1-201ENST00000157600 EYA4O95677 639 aa13.31□□□□□ -0.28
LMCD1-201ENST00000157600 PIGHQ14442 188 aaPredicted RBP13.31□□□□□ -0.28
LMCD1-201ENST00000157600 SLC18A3Q16572 532 aa13.31□□□□□ -0.28
LMCD1-201ENST00000157600 UBE2SQ16763 222 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms