RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 DYDC2Q96IM9 177 aa17.72■□□□□ 0.43
ERCC1-201ENST00000013807 NECTIN4Q96NY8 510 aa17.72■□□□□ 0.43
ERCC1-201ENST00000013807 MTMR9Q96QG7 549 aa17.72■□□□□ 0.43
ERCC1-201ENST00000013807 BRMS1Q9HCU9 246 aa17.72■□□□□ 0.43
ERCC1-201ENST00000013807 XPNPEP1Q9NQW7 623 aa17.72■□□□□ 0.43
ERCC1-201ENST00000013807 ANKEF1Q9NU02 776 aa17.72■□□□□ 0.43
ERCC1-201ENST00000013807 ZBTB39O15060 712 aa17.71■□□□□ 0.43
ERCC1-201ENST00000013807 ZC3H11AO75152 810 aaKnown RBP eCLIP17.71■□□□□ 0.43
ERCC1-201ENST00000013807 LARGE1O95461 756 aa17.71■□□□□ 0.43
ERCC1-201ENST00000013807 SRGAP2CP0DJJ0 459 aa17.71■□□□□ 0.43
ERCC1-201ENST00000013807 NCLP19338 710 aaKnown RBP17.71■□□□□ 0.43
ERCC1-201ENST00000013807 PTENP60484 403 aa17.71■□□□□ 0.43
ERCC1-201ENST00000013807 XKR9Q5GH70 373 aa17.71■□□□□ 0.43
ERCC1-201ENST00000013807 NCAPH2Q6IBW4 605 aa17.71■□□□□ 0.43
ERCC1-201ENST00000013807 NECAB1Q8N987 351 aa17.71■□□□□ 0.43
ERCC1-201ENST00000013807 RNF149Q8NC42 400 aa17.71■□□□□ 0.43
ERCC1-201ENST00000013807 RPGRIP1Q96KN7 1286 aa17.71■□□□□ 0.43
ERCC1-201ENST00000013807 MTRQ99707 1265 aa17.71■□□□□ 0.43
ERCC1-201ENST00000013807 EIF2AK1Q9BQI3 630 aaKnown RBP17.71■□□□□ 0.43
ERCC1-201ENST00000013807 NFKBIZQ9BYH8 718 aa17.71■□□□□ 0.43
ERCC1-201ENST00000013807 UBN1Q9NPG3 1134 aa17.71■□□□□ 0.43
ERCC1-201ENST00000013807 C2orf16Q68DN1 1984 aa17.71■□□□□ 0.43
ERCC1-201ENST00000013807 BTBD18B2RXH4 712 aa17.7■□□□□ 0.42
ERCC1-201ENST00000013807 MARCH6O60337 910 aa17.7■□□□□ 0.42
ERCC1-201ENST00000013807 DTNBO60941 627 aa17.7■□□□□ 0.42
ERCC1-201ENST00000013807 DGAT1O75907 488 aa17.7■□□□□ 0.42
ERCC1-201ENST00000013807 CYP4A11Q02928 519 aa17.7■□□□□ 0.42
ERCC1-201ENST00000013807 SIGLEC14Q08ET2 396 aa17.7■□□□□ 0.42
ERCC1-201ENST00000013807 CTTNQ14247 550 aaKnown RBP17.7■□□□□ 0.42
ERCC1-201ENST00000013807 LLGL2Q6P1M3 1020 aa17.7■□□□□ 0.42
ERCC1-201ENST00000013807 ZNF280BQ86YH2 543 aa17.7■□□□□ 0.42
ERCC1-201ENST00000013807 TPH2Q8IWU9 490 aa17.7■□□□□ 0.42
ERCC1-201ENST00000013807 SLC22A17Q8WUG5 538 aa17.7■□□□□ 0.42
ERCC1-201ENST00000013807 CCDC51Q96ER9 411 aa17.7■□□□□ 0.42
ERCC1-201ENST00000013807 TMEM175Q9BSA9 504 aa17.7■□□□□ 0.42
ERCC1-201ENST00000013807 VN1R3Q9BXE9 311 aa17.7■□□□□ 0.42
ERCC1-201ENST00000013807 TTC12Q9H892 705 aaPredicted RBP17.7■□□□□ 0.42
ERCC1-201ENST00000013807 RSAD1Q9HA92 442 aa17.7■□□□□ 0.42
ERCC1-201ENST00000013807 DNAJB4Q9UDY4 337 aa17.7■□□□□ 0.42
ERCC1-201ENST00000013807 TMEM221A6NGB7 291 aa17.69■□□□□ 0.42
ERCC1-201ENST00000013807 M0R296 226 aa17.69■□□□□ 0.42
ERCC1-201ENST00000013807 B4GALT3O60512 393 aa17.69■□□□□ 0.42
ERCC1-201ENST00000013807 LILRB3O75022 631 aa17.69■□□□□ 0.42
ERCC1-201ENST00000013807 DDHD2O94830 711 aa17.69■□□□□ 0.42
ERCC1-201ENST00000013807 EFEMP2O95967 443 aa17.69■□□□□ 0.42
ERCC1-201ENST00000013807 ALDH2P05091 517 aa17.69■□□□□ 0.42
ERCC1-201ENST00000013807 ARL2P36404 184 aa17.69■□□□□ 0.42
ERCC1-201ENST00000013807 SLC11A1P49279 550 aa17.69■□□□□ 0.42
ERCC1-201ENST00000013807 RNASELQ05823 741 aaKnown RBP17.69■□□□□ 0.42
ERCC1-201ENST00000013807 CALCRLQ16602 461 aa17.69■□□□□ 0.42
ERCC1-201ENST00000013807 CES5AQ6NT32 575 aa17.69■□□□□ 0.42
ERCC1-201ENST00000013807 SMG8Q8ND04 991 aaKnown RBP17.69■□□□□ 0.42
ERCC1-201ENST00000013807 URGCPQ8TCY9 931 aa17.69■□□□□ 0.42
ERCC1-201ENST00000013807 BCL7CQ8WUZ0 217 aaPredicted RBP17.69■□□□□ 0.42
ERCC1-201ENST00000013807 FBXL18Q96ME1 805 aa17.69■□□□□ 0.42
ERCC1-201ENST00000013807 DZANK1Q9NVP4 752 aa17.69■□□□□ 0.42
ERCC1-201ENST00000013807 NR2E1Q9Y466 385 aa17.69■□□□□ 0.42
ERCC1-201ENST00000013807 MTHFRP42898 656 aa17.68■□□□□ 0.42
ERCC1-201ENST00000013807 RARRES1P49788 294 aa17.68■□□□□ 0.42
ERCC1-201ENST00000013807 AFF1P51825 1210 aaKnown RBP17.68■□□□□ 0.42
ERCC1-201ENST00000013807 NEK4P51957 841 aa17.68■□□□□ 0.42
ERCC1-201ENST00000013807 PTPN21Q16825 1174 aa17.68■□□□□ 0.42
ERCC1-201ENST00000013807 LONRF3Q496Y0 759 aa17.68■□□□□ 0.42
ERCC1-201ENST00000013807 PPFIBP1Q86W92 1011 aa17.68■□□□□ 0.42
ERCC1-201ENST00000013807 DIS3L2Q8IYB7 885 aaKnown RBP17.68■□□□□ 0.42
ERCC1-201ENST00000013807 ASIC4Q96FT7 647 aa17.68■□□□□ 0.42
ERCC1-201ENST00000013807 INPP5FQ9Y2H2 1132 aa17.68■□□□□ 0.42
ERCC1-201ENST00000013807 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.67■□□□□ 0.42
ERCC1-201ENST00000013807 WNT7AO00755 349 aa17.67■□□□□ 0.42
ERCC1-201ENST00000013807 NEMFO60524 1076 aa17.67■□□□□ 0.42
ERCC1-201ENST00000013807 TSPAN1O60635 241 aa17.67■□□□□ 0.42
ERCC1-201ENST00000013807 DSC1Q08554 894 aa17.67■□□□□ 0.42
ERCC1-201ENST00000013807 ST3GAL1Q11201 340 aa17.67■□□□□ 0.42
ERCC1-201ENST00000013807 TFDP1Q14186 410 aa17.67■□□□□ 0.42
ERCC1-201ENST00000013807 PTPN14Q15678 1187 aa17.67■□□□□ 0.42
ERCC1-201ENST00000013807 AMHR2Q16671 573 aa17.67■□□□□ 0.42
ERCC1-201ENST00000013807 NOTUMQ6P988 496 aa17.67■□□□□ 0.42
ERCC1-201ENST00000013807 RNF168Q8IYW5 571 aaPredicted RBP17.67■□□□□ 0.42
ERCC1-201ENST00000013807 PBXIP1Q96AQ6 731 aa17.67■□□□□ 0.42
ERCC1-201ENST00000013807 POMKQ9H5K3 350 aa17.67■□□□□ 0.42
ERCC1-201ENST00000013807 USTQ9Y2C2 406 aa17.67■□□□□ 0.42
ERCC1-201ENST00000013807 PLXNA3P51805 1871 aa17.67■□□□□ 0.42
ERCC1-201ENST00000013807 ZMYM2Q9UBW7 1377 aa17.66■□□□□ 0.42
ERCC1-201ENST00000013807 TRIP11Q15643 1979 aa17.66■□□□□ 0.42
ERCC1-201ENST00000013807 JAK2O60674 1132 aa17.66■□□□□ 0.42
ERCC1-201ENST00000013807 ERLIN2O94905 339 aa17.66■□□□□ 0.42
ERCC1-201ENST00000013807 SPATA31C1P0DKV0 1188 aa17.66■□□□□ 0.42
ERCC1-201ENST00000013807 NHLH1Q02575 133 aa17.66■□□□□ 0.42
ERCC1-201ENST00000013807 MBTD1Q05BQ5 628 aa17.66■□□□□ 0.42
ERCC1-201ENST00000013807 NCBP1Q09161 790 aaKnown RBP17.66■□□□□ 0.42
ERCC1-201ENST00000013807 KIAA1841Q6NSI8 718 aa17.66■□□□□ 0.42
ERCC1-201ENST00000013807 COLGALT2Q8IYK4 626 aa17.66■□□□□ 0.42
ERCC1-201ENST00000013807 FBXL6Q8N531 539 aa17.66■□□□□ 0.42
ERCC1-201ENST00000013807 RIPOR3Q96MK2 946 aa17.66■□□□□ 0.42
ERCC1-201ENST00000013807 PRRX2Q99811 253 aa17.66■□□□□ 0.42
ERCC1-201ENST00000013807 CSRNP2Q9H175 543 aa17.66■□□□□ 0.42
ERCC1-201ENST00000013807 DAXXQ9UER7 740 aaPredicted RBP17.66■□□□□ 0.42
ERCC1-201ENST00000013807 FAN1Q9Y2M0 1017 aa17.66■□□□□ 0.42
ERCC1-201ENST00000013807 IPPQ9Y573 584 aa17.66■□□□□ 0.42
ERCC1-201ENST00000013807 NRP1O14786 923 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms